version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3347 64.23 0 3701309..3702007 - 232 39998457 ispD GSU3368 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3348 66.16 +1 3702160..3703548 - 462 39998458 selA GSU3369 - selenocysteine synthase 3349 57.49 0 3703818..3704525 - 235 39998459 - GSU3370 - GntR family transcriptional regulator 3350 62.39 0 3704800..3705570 + 256 39998460 - GSU3371 - AP endonuclease 3351 61.33 0 3705606..3707048 - 480 39998461 - GSU3372 - cardiolipin synthetase, putative 3352 64.88 0 3707306..3708652 + 448 39998462 sun GSU3373 - Sun protein 3353 61.26 0 3708688..3709353 + 221 39998463 rpe GSU3374 - ribulose-phosphate 3-epimerase 3354 62.21 0 3709465..3709980 + 171 39998464 - GSU3375 - mutT/nudix family protein 3355 61.49 0 3710034..3710960 + 308 39998465 - GSU3376 - GGDEF/response regulator receiver domain-containing protein 3356 62.30 0 3710946..3711632 - 228 39998466 - GSU3377 - helix-hairpin-helix domain-containing protein 3357 62.77 0 3711595..3714648 - 1017 39998467 - GSU3378 - glutamate-ammonia ligase adenylyltransferase 3358 63.88 0 3714645..3715685 - 346 39998468 - GSU3379 - aIF-2BI family translation initiation factor 3359 63.12 0 3715702..3717141 - 479 39998469 gatB GSU3380 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3360 66.26 +1 3717158..3718615 - 485 39998470 gatA GSU3381 - glutamyl-tRNA(Gln) amidotransferase, A subunit 3361 61.45 0 3718661..3719005 - 114 39998471 - GSU3382 - hypothetical protein 3362 57.29 0 3718983..3719270 - 95 39998472 gatC GSU3383 - glutamyl-tRNA(Gln) amidotransferase, C subunit 3363 63.69 0 3719386..3720963 - 525 39998473 - GSU3384 - cardiolipin synthetase, putative 3364 61.39 0 3721688..3723544 + 618 39998474 pckA GSU3385 - phosphoenolpyruvate carboxykinase 3365 59.38 0 3723671..3724768 - 365 39998475 - GSU3386 - putative lipoprotein 3366 63.55 0 3725285..3726118 - 277 39998476 - GSU3387 - AraC/XylS family transcriptional regulator 3367 63.56 0 3726258..3727223 + 321 39998477 - GSU3388 - hypothetical protein 3368 62.38 0 3727295..3727924 - 209 39998478 - GSU3389 - hypothetical protein 3369 62.05 0 3727955..3728863 - 302 39998479 - GSU3390 - hypothetical protein 3370 60.00 0 3728872..3729576 - 234 39998480 - GSU3391 - branched-chain amino acid ABC transporter, ATP-binding protein 3371 62.91 0 3729621..3730391 - 256 39998481 - GSU3392 - branched-chain amino acid ABC transporter, ATP-binding protein 3372 60.06 0 3730410..3731333 - 307 39998482 - GSU3393 - branched-chain amino acid ABC transporter, permease protein 3373 61.64 0 3731341..3732216 - 291 39998483 - GSU3394 - branched-chain amino acid ABC transporter, permease protein 3374 62.39 0 3732461..3735475 - 1004 39998484 putA GSU3395 - proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 3375 62.20 0 3735764..3736480 + 238 39998485 - GSU3396 - GntR family transcriptional regulator 3376 62.13 0 3736569..3736943 + 124 39998486 - GSU3397 - hypothetical protein 3377 67.20 +1 3737064..3738368 + 434 39998487 - GSU3398 - metal ion efflux outer membrane protein family protein, putative 3378 67.87 +1 3738371..3740119 + 582 39998488 - GSU3399 - RND family efflux transporter MFP subunit 3379 64.78 0 3740132..3743203 + 1023 39998489 - GSU3400 - CzcA family heavy metal efflux protein 3380 61.13 0 3743342..3744532 - 396 39998490 - GSU3401 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 3381 55.90 0 3744573..3744860 - 95 39998491 - GSU3402 - hypothetical protein 3382 57.12 0 3744939..3746321 - 460 39998492 - GSU3403 - hypothetical protein 3383 60.30 0 3746456..3747178 - 240 39998493 - GSU3404 - amino acid ABC transporter, ATP-binding protein 3384 58.96 0 3747189..3747980 - 263 39998494 - GSU3405 - amino acid ABC transporter, permease protein 3385 58.60 0 3747981..3748736 - 251 39998495 - GSU3406 - amino acid ABC transporter, periplasmic amino acid-binding protein 3386 62.00 0 3748930..3749808 + 292 39998496 - GSU3407 - hypothetical protein 3387 61.36 0 3749852..3750907 + 351 39998497 - GSU3408 - L-threonine aldolase, low-specificity 3388 58.67 0 3751347..3751571 + 74 39998498 - GSU3409 - hypothetical protein 3389 59.74 0 3751637..3751867 + 76 39998499 - GSU3410 - hypothetical protein 3390 65.05 0 3752116..3754335 - 739 39998500 - GSU3411 - ATP-dependent DNA helicase PcrA, putative 3391 62.91 0 3754334..3754546 + 70 39998501 - GSU3412 - hypothetical protein 3392 64.49 0 3754585..3755181 - 198 39998502 - GSU3413 - putative lipoprotein 3393 59.85 0 3755246..3756889 - 547 39998503 - GSU3414 - hypothetical protein 3394 62.86 0 3757472..3758890 + 472 39998504 - GSU3415 - radical SAM domain/B12 binding domain-containing protein 3395 66.02 0 3758896..3759513 + 205 39998505 - GSU3416 - hypothetical protein 3396 66.86 +1 3759521..3761050 + 509 39998506 - GSU3417 - dioxygenase, putative 3397 63.20 0 3761065..3762537 - 490 39998507 - GSU3418 - sigma-54 dependent DNA-binding response regulator 3398 61.89 0 3762534..3764858 - 774 39998508 - GSU3419 - sensor histidine kinase 3399 66.34 +1 3765224..3766147 + 307 39998509 - GSU3420 - lipid A biosynthesis lauroyl acyltransferase, putative 3400 63.50 0 3766220..3766945 - 241 39998510 - GSU3421 - Crp/FNR family transcriptional regulator 3401 68.64 +1 3766924..3767532 - 202 39998511 - GSU3422 - hypothetical protein 3402 69.51 +1 3767539..3769545 - 668 39998512 tkt GSU3423 - transketolase 3403 67.52 +1 3769624..3771030 + 468 39998513 merA-2 GSU3424 - mercuric reductase 3404 66.17 +1 3771037..3771840 + 267 39998514 - GSU3425 - hypothetical protein 3405 66.89 +1 3771846..3772745 - 299 39998515 - GSU3426 - hypothetical protein 3406 62.16 0 3773200..3773532 - 110 39998516 - GSU3427 - hypothetical protein 3407 66.84 +1 3773542..3774105 - 187 39998517 - GSU3428 - cytochrome c family protein, putative 3408 68.74 +1 3774129..3775529 - 466 39998518 nuoN-2 GSU3429 - NADH dehydrogenase I, N subunit 3409 64.86 0 3775526..3777016 - 496 39998519 nuoM-2 GSU3430 - NADH dehydrogenase I, M subunit 3410 66.99 +1 3777016..3778890 - 624 39998520 nuoL-2 GSU3431 - NADH dehydrogenase I, L subunit 3411 62.78 0 3778887..3779195 - 102 39998521 nuoI GSU3432 - NADH dehydrogenase I, K subunit 3412 63.82 0 3779192..3779683 - 163 39998522 nuoJ GSU3433 - NADH dehydrogenase I, J subunit 3413 66.10 +1 3779688..3780218 - 176 39998523 nuoI-2 GSU3434 - NADH dehydrogenase subunit I 3414 64.32 0 3780275..3780700 - 141 39998524 - GSU3435 - ankyrin repeat-containing protein 3415 63.54 0 3780842..3781831 - 329 39998525 nuoH-2 GSU3436 - NADH dehydrogenase I, H subunit 3416 64.86 0 3781828..3783429 - 533 39998526 - GSU3437 - sensory box histidine kinase 3417 58.19 0 3783594..3783935 - 113 39998527 - GSU3438 - hypothetical protein 3418 66.22 +1 3783961..3785994 - 677 39998528 - GSU3439 - NADH dehydrogenase subunit G 3419 62.30 0 3786004..3786576 - 190 39998529 - GSU3440 - hypothetical protein 3420 66.59 +1 3786573..3787844 - 423 39998530 nuoF GSU3441 - NADH dehydrogenase I, F subunit 3421 64.64 0 3787919..3788263 - 114 39998531 - GSU3442 - hypothetical protein 3422 67.89 +1 3788267..3788755 - 162 39998532 nuoE-2 GSU3443 - NADH dehydrogenase subunit E 3423 64.86 0 3788761..3791139 - 792 39998533 nuoBCD GSU3444 - trifunctional NADH dehydrogenase I subunit B/C/D 3424 62.70 0 3791126..3791554 - 142 39998534 nuoA-2 GSU3445 - NADH dehydrogenase I, A subunit 3425 68.65 +1 3791654..3792106 - 150 39998535 - GSU3446 - thioredoxin family protein, selenocysteine-containing 3426 60.47 0 3792116..3792583 - 155 39998536 - GSU3447 - AhpC/TSA family protein 3427 66.01 0 3792646..3793857 - 403 39998537 ackA-2 GSU3448 - acetate kinase 3428 57.14 0 3793890..3794078 - 62 39998538 - GSU3449 - ferredoxin family protein, putative 3429 66.12 +1 3794113..3798645 - 1510 39998539 - GSU3450 - glutamate synthase-related protein 3430 64.61 0 3799051..3799878 - 275 39998540 - GSU3451 - hypothetical protein 3431 69.70 +1 3799899..3800030 - 43 39998541 - GSU3452 - hypothetical protein 3432 61.58 0 3800181..3801203 - 340 39998542 hemE GSU3453 - uroporphyrinogen decarboxylase 3433 57.80 0 3801376..3802446 - 356 39998543 - GSU3454 - radical SAM domain-containing protein 3434 61.67 0 3802531..3803250 - 239 39998544 - GSU3455 - ABC transporter permease 3435 62.35 0 3803386..3803895 - 169 39998545 def-2 GSU3456 - polypeptide deformylase 3436 60.22 0 3803900..3804457 - 185 39998546 - GSU3457 - glycine cleavage system transcriptional repressor, putative 3437 59.60 0 3804549..3804845 - 98 39998547 - GSU3459 - hypothetical protein 3438 54.95 -1 3804616..3804726 + 36 39998548 - GSU3458 - hypothetical protein 3439 67.88 +1 3804900..3805892 - 330 39998549 - GSU3460 - glycosyl transferase, group 2 family protein 3440 62.60 0 3805904..3806296 - 130 39998550 - GSU3461 - thioesterase family protein 3441 61.27 0 3806359..3807099 - 246 39998551 - GSU3462 - putative lipoprotein 3442 60.24 0 3807391..3808044 - 217 39998552 gidB GSU3463 - glucose-inhibited division protein B 3443 61.62 0 3808041..3809924 - 627 39998553 gidA GSU3464 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3444 58.72 0 3810131..3811501 - 456 39998554 trmE GSU3465 - tRNA modification GTPase TrmE 3445 56.45 0 3811508..3813103 - 531 39998555 - GSU3466 - hypothetical protein 3446 52.38 -1 3813123..3813332 - 69 39998556 - GSU3467 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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