version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3319 62.94 0 3665270..3666904 + 544 39998429 groEL GSU3340 - chaperonin GroEL 3320 60.31 0 3667264..3669228 + 654 39998430 - GSU3341 - hypothetical protein 3321 63.24 0 3669269..3670612 + 447 39998431 - GSU3342 - hypothetical protein 3322 60.38 0 3670697..3672319 + 540 39998432 - GSU3343 - SpoVR-like family protein 3323 59.03 0 3672332..3674635 + 767 39998433 - GSU3344 - hypothetical protein 3324 63.69 0 3674668..3675036 + 122 39998434 - GSU3345 - hypothetical protein 3325 60.39 0 3675042..3676874 - 610 39998435 - GSU3346 - potassium uptake protein, Kup system 3326 65.57 0 3677009..3679381 + 790 39998436 - GSU3347 - U32 family peptidase 3327 64.02 0 3679517..3680422 + 301 39998437 - GSU3348 - heat shock protein 33 3328 66.23 +1 3680526..3681209 + 227 39998438 - GSU3349 - cyclase, putative 3329 65.19 0 3681280..3682977 + 565 39998439 - GSU3350 - sensor histidine kinase/GGDEF domain-containing protein 3330 61.45 0 3683067..3683564 + 165 39998440 - GSU3351 - hypothetical protein 3331 64.60 0 3683584..3683970 + 128 39998441 - GSU3352 - hypothetical protein 3332 67.12 +1 3684041..3684931 - 296 39998442 - GSU3353 - RNA pseudouridine synthase family protein 3333 65.33 0 3684928..3685449 - 173 39998443 - GSU3354 - mutT/nudix family protein 3334 56.25 0 3685436..3685579 + 47 39998444 - GSU3355 - hypothetical protein 3335 62.86 0 3685627..3687228 + 533 39998445 - GSU3356 - GGDEF domain/HAMP domain-containing protein 3336 62.56 0 3687303..3689687 + 794 39998446 - GSU3357 - sensory box histidine kinase 3337 61.42 0 3689689..3690126 - 145 39998447 - GSU3358 - hypothetical protein 3338 65.07 0 3690311..3691372 + 353 39998448 - GSU3359 - hypothetical protein 3339 64.92 0 3691369..3692688 + 439 39998449 - GSU3360 - M16 family peptidase 3340 64.34 0 3692660..3694207 - 515 39998450 - GSU3361 - transglutaminase domain-containing protein 3341 61.99 0 3694218..3694559 - 113 39998451 - GSU3362 - hypothetical protein 3342 58.73 0 3694820..3697111 + 763 39998452 - GSU3363 - sigma-54 dependent trancsriptional regulator 3343 48.37 -2 3697200..3697505 + 101 39998453 - GSU3364 - hypothetical protein 3344 60.03 0 3697619..3699064 - 481 39998454 cysS GSU3365 - cysteinyl-tRNA synthetase 3345 62.46 0 3699097..3700761 - 554 39998455 glnS GSU3366 - glutaminyl-tRNA synthetase 3346 63.71 0 3700792..3701265 - 157 39998456 ispF GSU3367 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3347 64.23 0 3701309..3702007 - 232 39998457 ispD GSU3368 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3348 66.16 +1 3702160..3703548 - 462 39998458 selA GSU3369 - selenocysteine synthase 3349 57.49 0 3703818..3704525 - 235 39998459 - GSU3370 - GntR family transcriptional regulator 3350 62.39 0 3704800..3705570 + 256 39998460 - GSU3371 - AP endonuclease 3351 61.33 0 3705606..3707048 - 480 39998461 - GSU3372 - cardiolipin synthetase, putative 3352 64.88 0 3707306..3708652 + 448 39998462 sun GSU3373 - Sun protein 3353 61.26 0 3708688..3709353 + 221 39998463 rpe GSU3374 - ribulose-phosphate 3-epimerase 3354 62.21 0 3709465..3709980 + 171 39998464 - GSU3375 - mutT/nudix family protein 3355 61.49 0 3710034..3710960 + 308 39998465 - GSU3376 - GGDEF/response regulator receiver domain-containing protein 3356 62.30 0 3710946..3711632 - 228 39998466 - GSU3377 - helix-hairpin-helix domain-containing protein 3357 62.77 0 3711595..3714648 - 1017 39998467 - GSU3378 - glutamate-ammonia ligase adenylyltransferase 3358 63.88 0 3714645..3715685 - 346 39998468 - GSU3379 - aIF-2BI family translation initiation factor 3359 63.12 0 3715702..3717141 - 479 39998469 gatB GSU3380 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3360 66.26 +1 3717158..3718615 - 485 39998470 gatA GSU3381 - glutamyl-tRNA(Gln) amidotransferase, A subunit 3361 61.45 0 3718661..3719005 - 114 39998471 - GSU3382 - hypothetical protein 3362 57.29 0 3718983..3719270 - 95 39998472 gatC GSU3383 - glutamyl-tRNA(Gln) amidotransferase, C subunit 3363 63.69 0 3719386..3720963 - 525 39998473 - GSU3384 - cardiolipin synthetase, putative 3364 61.39 0 3721688..3723544 + 618 39998474 pckA GSU3385 - phosphoenolpyruvate carboxykinase 3365 59.38 0 3723671..3724768 - 365 39998475 - GSU3386 - putative lipoprotein 3366 63.55 0 3725285..3726118 - 277 39998476 - GSU3387 - AraC/XylS family transcriptional regulator 3367 63.56 0 3726258..3727223 + 321 39998477 - GSU3388 - hypothetical protein 3368 62.38 0 3727295..3727924 - 209 39998478 - GSU3389 - hypothetical protein 3369 62.05 0 3727955..3728863 - 302 39998479 - GSU3390 - hypothetical protein 3370 60.00 0 3728872..3729576 - 234 39998480 - GSU3391 - branched-chain amino acid ABC transporter, ATP-binding protein 3371 62.91 0 3729621..3730391 - 256 39998481 - GSU3392 - branched-chain amino acid ABC transporter, ATP-binding protein 3372 60.06 0 3730410..3731333 - 307 39998482 - GSU3393 - branched-chain amino acid ABC transporter, permease protein 3373 61.64 0 3731341..3732216 - 291 39998483 - GSU3394 - branched-chain amino acid ABC transporter, permease protein 3374 62.39 0 3732461..3735475 - 1004 39998484 putA GSU3395 - proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 3375 62.20 0 3735764..3736480 + 238 39998485 - GSU3396 - GntR family transcriptional regulator 3376 62.13 0 3736569..3736943 + 124 39998486 - GSU3397 - hypothetical protein 3377 67.20 +1 3737064..3738368 + 434 39998487 - GSU3398 - metal ion efflux outer membrane protein family protein, putative 3378 67.87 +1 3738371..3740119 + 582 39998488 - GSU3399 - RND family efflux transporter MFP subunit 3379 64.78 0 3740132..3743203 + 1023 39998489 - GSU3400 - CzcA family heavy metal efflux protein 3380 61.13 0 3743342..3744532 - 396 39998490 - GSU3401 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 3381 55.90 0 3744573..3744860 - 95 39998491 - GSU3402 - hypothetical protein 3382 57.12 0 3744939..3746321 - 460 39998492 - GSU3403 - hypothetical protein 3383 60.30 0 3746456..3747178 - 240 39998493 - GSU3404 - amino acid ABC transporter, ATP-binding protein 3384 58.96 0 3747189..3747980 - 263 39998494 - GSU3405 - amino acid ABC transporter, permease protein 3385 58.60 0 3747981..3748736 - 251 39998495 - GSU3406 - amino acid ABC transporter, periplasmic amino acid-binding protein 3386 62.00 0 3748930..3749808 + 292 39998496 - GSU3407 - hypothetical protein 3387 61.36 0 3749852..3750907 + 351 39998497 - GSU3408 - L-threonine aldolase, low-specificity 3388 58.67 0 3751347..3751571 + 74 39998498 - GSU3409 - hypothetical protein 3389 59.74 0 3751637..3751867 + 76 39998499 - GSU3410 - hypothetical protein 3390 65.05 0 3752116..3754335 - 739 39998500 - GSU3411 - ATP-dependent DNA helicase PcrA, putative 3391 62.91 0 3754334..3754546 + 70 39998501 - GSU3412 - hypothetical protein 3392 64.49 0 3754585..3755181 - 198 39998502 - GSU3413 - putative lipoprotein 3393 59.85 0 3755246..3756889 - 547 39998503 - GSU3414 - hypothetical protein 3394 62.86 0 3757472..3758890 + 472 39998504 - GSU3415 - radical SAM domain/B12 binding domain-containing protein 3395 66.02 0 3758896..3759513 + 205 39998505 - GSU3416 - hypothetical protein 3396 66.86 +1 3759521..3761050 + 509 39998506 - GSU3417 - dioxygenase, putative 3397 63.20 0 3761065..3762537 - 490 39998507 - GSU3418 - sigma-54 dependent DNA-binding response regulator 3398 61.89 0 3762534..3764858 - 774 39998508 - GSU3419 - sensor histidine kinase 3399 66.34 +1 3765224..3766147 + 307 39998509 - GSU3420 - lipid A biosynthesis lauroyl acyltransferase, putative 3400 63.50 0 3766220..3766945 - 241 39998510 - GSU3421 - Crp/FNR family transcriptional regulator 3401 68.64 +1 3766924..3767532 - 202 39998511 - GSU3422 - hypothetical protein 3402 69.51 +1 3767539..3769545 - 668 39998512 tkt GSU3423 - transketolase 3403 67.52 +1 3769624..3771030 + 468 39998513 merA-2 GSU3424 - mercuric reductase 3404 66.17 +1 3771037..3771840 + 267 39998514 - GSU3425 - hypothetical protein 3405 66.89 +1 3771846..3772745 - 299 39998515 - GSU3426 - hypothetical protein 3406 62.16 0 3773200..3773532 - 110 39998516 - GSU3427 - hypothetical protein 3407 66.84 +1 3773542..3774105 - 187 39998517 - GSU3428 - cytochrome c family protein, putative 3408 68.74 +1 3774129..3775529 - 466 39998518 nuoN-2 GSU3429 - NADH dehydrogenase I, N subunit 3409 64.86 0 3775526..3777016 - 496 39998519 nuoM-2 GSU3430 - NADH dehydrogenase I, M subunit 3410 66.99 +1 3777016..3778890 - 624 39998520 nuoL-2 GSU3431 - NADH dehydrogenase I, L subunit 3411 62.78 0 3778887..3779195 - 102 39998521 nuoI GSU3432 - NADH dehydrogenase I, K subunit 3412 63.82 0 3779192..3779683 - 163 39998522 nuoJ GSU3433 - NADH dehydrogenase I, J subunit 3413 66.10 +1 3779688..3780218 - 176 39998523 nuoI-2 GSU3434 - NADH dehydrogenase subunit I 3414 64.32 0 3780275..3780700 - 141 39998524 - GSU3435 - ankyrin repeat-containing protein 3415 63.54 0 3780842..3781831 - 329 39998525 nuoH-2 GSU3436 - NADH dehydrogenase I, H subunit 3416 64.86 0 3781828..3783429 - 533 39998526 - GSU3437 - sensory box histidine kinase 3417 58.19 0 3783594..3783935 - 113 39998527 - GSU3438 - hypothetical protein 3418 66.22 +1 3783961..3785994 - 677 39998528 - GSU3439 - NADH dehydrogenase subunit G 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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