version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3284 52.84 -1 3628992..3629273 + 93 39998394 - GSU3305 - hypothetical protein 3285 59.29 0 3629453..3630970 + 505 39998395 - GSU3306 - hypothetical protein 3286 60.97 0 3631136..3632452 + 438 39998396 hisZ GSU3307 - ATP phosphoribosyltransferase regulatory subunit 3287 60.83 0 3632453..3633754 + 433 39998397 purA GSU3308 - adenylosuccinate synthetase 3288 61.17 0 3634083..3634901 - 272 39998398 - GSU3309 - hypothetical protein 3289 55.30 -1 3634910..3635173 - 87 39998399 - GSU3310 - hypothetical protein 3290 58.47 0 3635189..3636091 + 300 39998400 - GSU3311 - hypothetical protein 3291 61.74 0 3636130..3637083 - 317 39998401 hemH GSU3312 - ferrochelatase 3292 65.30 0 3637191..3638798 - 535 39998402 - GSU3313 - thiolase, putative 3293 61.95 0 3638936..3639952 - 338 39998403 - GSU3314 - putative lipoprotein 3294 64.58 0 3640042..3641286 - 414 39998404 - GSU3315 - major facilitator family transporter 3295 63.47 0 3641415..3642134 + 239 39998405 - GSU3316 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 3296 65.41 0 3642950..3644059 + 369 39998406 - GSU3317 - hypothetical protein 3297 64.25 0 3644195..3645598 - 467 39998407 - GSU3318 - hypothetical protein 3298 62.31 0 3645704..3646300 - 198 39998408 ppiA GSU3319 - peptidyl-prolyl cis-trans isomerase A 3299 65.16 0 3646373..3646969 - 198 39998409 - GSU3320 - ribosomal protein L11 methyltransferase, putative 3300 66.81 +1 3647128..3648537 + 469 39998410 - GSU3321 - phosphoglucomutase/phosphomannomutase family protein 3301 57.23 0 3648635..3649588 + 317 39998411 corA-2 GSU3322 - magnesium and cobalt transport protein CorA 3302 64.33 0 3649590..3651773 + 727 39998412 ppk GSU3323 - polyphosphate kinase 3303 64.16 0 3651999..3652637 - 212 39998413 - GSU3324 - Cro/CI family transcriptional regulator 3304 63.04 0 3652846..3655659 + 937 39998414 uvrA GSU3325 - excinuclease ABC, A subunit 3305 64.89 0 3655690..3656421 - 243 39998415 - GSU3326 - hypothetical protein 3306 61.22 0 3656418..3656711 - 97 39998416 - GSU3327 - hypothetical protein 3307 63.58 0 3656802..3657545 - 247 39998417 - GSU3328 - hypothetical protein 3308 65.28 0 3657542..3658837 - 431 39998418 - GSU3329 - radical SAM domain-containing protein 3309 65.78 0 3658912..3660036 - 374 39998419 - GSU3330 - Oye family NADH-dependent flavin oxidoreductase 3310 64.38 0 3660079..3661521 - 480 39998420 pyk GSU3331 - pyruvate kinase 3311 61.49 0 3661539..3661886 - 115 39998421 - GSU3332 - cytochrome c family protein, putative 3312 64.29 0 3662036..3663046 - 336 161579496 - GSU3333 - 3-deoxy-7-phosphoheptulonate synthase 3313 60.95 0 3663224..3663538 + 104 39998423 - GSU3334 - cytochrome c family protein, putative 3314 64.21 0 3663545..3663829 + 94 39998424 - GSU3335 - hypothetical protein 3315 59.34 0 3663853..3664125 + 90 39998425 - GSU3336 - hypothetical protein 3316 65.60 0 3664119..3664682 + 187 39998426 - GSU3337 - hypothetical protein 3317 61.40 0 3664470..3664583 - 37 39998427 - GSU3338 - hypothetical protein 3318 57.99 0 3664919..3665206 + 95 39998428 groES GSU3339 - co-chaperonin GroES 3319 62.94 0 3665270..3666904 + 544 39998429 groEL GSU3340 - chaperonin GroEL 3320 60.31 0 3667264..3669228 + 654 39998430 - GSU3341 - hypothetical protein 3321 63.24 0 3669269..3670612 + 447 39998431 - GSU3342 - hypothetical protein 3322 60.38 0 3670697..3672319 + 540 39998432 - GSU3343 - SpoVR-like family protein 3323 59.03 0 3672332..3674635 + 767 39998433 - GSU3344 - hypothetical protein 3324 63.69 0 3674668..3675036 + 122 39998434 - GSU3345 - hypothetical protein 3325 60.39 0 3675042..3676874 - 610 39998435 - GSU3346 - potassium uptake protein, Kup system 3326 65.57 0 3677009..3679381 + 790 39998436 - GSU3347 - U32 family peptidase 3327 64.02 0 3679517..3680422 + 301 39998437 - GSU3348 - heat shock protein 33 3328 66.23 +1 3680526..3681209 + 227 39998438 - GSU3349 - cyclase, putative 3329 65.19 0 3681280..3682977 + 565 39998439 - GSU3350 - sensor histidine kinase/GGDEF domain-containing protein 3330 61.45 0 3683067..3683564 + 165 39998440 - GSU3351 - hypothetical protein 3331 64.60 0 3683584..3683970 + 128 39998441 - GSU3352 - hypothetical protein 3332 67.12 +1 3684041..3684931 - 296 39998442 - GSU3353 - RNA pseudouridine synthase family protein 3333 65.33 0 3684928..3685449 - 173 39998443 - GSU3354 - mutT/nudix family protein 3334 56.25 0 3685436..3685579 + 47 39998444 - GSU3355 - hypothetical protein 3335 62.86 0 3685627..3687228 + 533 39998445 - GSU3356 - GGDEF domain/HAMP domain-containing protein 3336 62.56 0 3687303..3689687 + 794 39998446 - GSU3357 - sensory box histidine kinase 3337 61.42 0 3689689..3690126 - 145 39998447 - GSU3358 - hypothetical protein 3338 65.07 0 3690311..3691372 + 353 39998448 - GSU3359 - hypothetical protein 3339 64.92 0 3691369..3692688 + 439 39998449 - GSU3360 - M16 family peptidase 3340 64.34 0 3692660..3694207 - 515 39998450 - GSU3361 - transglutaminase domain-containing protein 3341 61.99 0 3694218..3694559 - 113 39998451 - GSU3362 - hypothetical protein 3342 58.73 0 3694820..3697111 + 763 39998452 - GSU3363 - sigma-54 dependent trancsriptional regulator 3343 48.37 -2 3697200..3697505 + 101 39998453 - GSU3364 - hypothetical protein 3344 60.03 0 3697619..3699064 - 481 39998454 cysS GSU3365 - cysteinyl-tRNA synthetase 3345 62.46 0 3699097..3700761 - 554 39998455 glnS GSU3366 - glutaminyl-tRNA synthetase 3346 63.71 0 3700792..3701265 - 157 39998456 ispF GSU3367 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3347 64.23 0 3701309..3702007 - 232 39998457 ispD GSU3368 - 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3348 66.16 +1 3702160..3703548 - 462 39998458 selA GSU3369 - selenocysteine synthase 3349 57.49 0 3703818..3704525 - 235 39998459 - GSU3370 - GntR family transcriptional regulator 3350 62.39 0 3704800..3705570 + 256 39998460 - GSU3371 - AP endonuclease 3351 61.33 0 3705606..3707048 - 480 39998461 - GSU3372 - cardiolipin synthetase, putative 3352 64.88 0 3707306..3708652 + 448 39998462 sun GSU3373 - Sun protein 3353 61.26 0 3708688..3709353 + 221 39998463 rpe GSU3374 - ribulose-phosphate 3-epimerase 3354 62.21 0 3709465..3709980 + 171 39998464 - GSU3375 - mutT/nudix family protein 3355 61.49 0 3710034..3710960 + 308 39998465 - GSU3376 - GGDEF/response regulator receiver domain-containing protein 3356 62.30 0 3710946..3711632 - 228 39998466 - GSU3377 - helix-hairpin-helix domain-containing protein 3357 62.77 0 3711595..3714648 - 1017 39998467 - GSU3378 - glutamate-ammonia ligase adenylyltransferase 3358 63.88 0 3714645..3715685 - 346 39998468 - GSU3379 - aIF-2BI family translation initiation factor 3359 63.12 0 3715702..3717141 - 479 39998469 gatB GSU3380 - aspartyl/glutamyl-tRNA amidotransferase subunit B 3360 66.26 +1 3717158..3718615 - 485 39998470 gatA GSU3381 - glutamyl-tRNA(Gln) amidotransferase, A subunit 3361 61.45 0 3718661..3719005 - 114 39998471 - GSU3382 - hypothetical protein 3362 57.29 0 3718983..3719270 - 95 39998472 gatC GSU3383 - glutamyl-tRNA(Gln) amidotransferase, C subunit 3363 63.69 0 3719386..3720963 - 525 39998473 - GSU3384 - cardiolipin synthetase, putative 3364 61.39 0 3721688..3723544 + 618 39998474 pckA GSU3385 - phosphoenolpyruvate carboxykinase 3365 59.38 0 3723671..3724768 - 365 39998475 - GSU3386 - putative lipoprotein 3366 63.55 0 3725285..3726118 - 277 39998476 - GSU3387 - AraC/XylS family transcriptional regulator 3367 63.56 0 3726258..3727223 + 321 39998477 - GSU3388 - hypothetical protein 3368 62.38 0 3727295..3727924 - 209 39998478 - GSU3389 - hypothetical protein 3369 62.05 0 3727955..3728863 - 302 39998479 - GSU3390 - hypothetical protein 3370 60.00 0 3728872..3729576 - 234 39998480 - GSU3391 - branched-chain amino acid ABC transporter, ATP-binding protein 3371 62.91 0 3729621..3730391 - 256 39998481 - GSU3392 - branched-chain amino acid ABC transporter, ATP-binding protein 3372 60.06 0 3730410..3731333 - 307 39998482 - GSU3393 - branched-chain amino acid ABC transporter, permease protein 3373 61.64 0 3731341..3732216 - 291 39998483 - GSU3394 - branched-chain amino acid ABC transporter, permease protein 3374 62.39 0 3732461..3735475 - 1004 39998484 putA GSU3395 - proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase 3375 62.20 0 3735764..3736480 + 238 39998485 - GSU3396 - GntR family transcriptional regulator 3376 62.13 0 3736569..3736943 + 124 39998486 - GSU3397 - hypothetical protein 3377 67.20 +1 3737064..3738368 + 434 39998487 - GSU3398 - metal ion efflux outer membrane protein family protein, putative 3378 67.87 +1 3738371..3740119 + 582 39998488 - GSU3399 - RND family efflux transporter MFP subunit 3379 64.78 0 3740132..3743203 + 1023 39998489 - GSU3400 - CzcA family heavy metal efflux protein 3380 61.13 0 3743342..3744532 - 396 39998490 - GSU3401 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 3381 55.90 0 3744573..3744860 - 95 39998491 - GSU3402 - hypothetical protein 3382 57.12 0 3744939..3746321 - 460 39998492 - GSU3403 - hypothetical protein 3383 60.30 0 3746456..3747178 - 240 39998493 - GSU3404 - amino acid ABC transporter, ATP-binding protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0