version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3245 62.24 0 3581132..3581809 + 225 39998355 - GSU3265 - sulfite reductase, assimilatory-type 3246 67.44 +1 3581843..3585079 - 1078 39998356 - GSU3266 - DNA helicase II, putative 3247 62.02 0 3585163..3585291 - 42 39998357 - GSU3267 - hypothetical protein 3248 62.21 0 3585295..3587538 - 747 39998358 feoB-2 GSU3268 - ferrous iron transport protein B 3249 59.61 0 3587766..3588020 - 84 39998359 - GSU3270 - feoA family protein 3250 63.05 0 3588092..3589501 - 469 39998360 - GSU3271 - hypothetical protein 3251 55.37 0 3589489..3589665 - 58 39998361 - GSU3272 - hypothetical protein 3252 60.10 0 3589678..3590727 - 349 39998362 - GSU3273 - hypothetical protein 3253 57.21 0 3590746..3591168 - 140 39998363 - GSU3274 - cytochrome c family protein, putative 3254 63.51 0 3591525..3592634 + 369 39998364 - GSU3275 - hypothetical protein 3255 60.97 0 3592634..3594319 + 561 39998365 - GSU3276 - LysM domain-containing protein 3256 62.99 0 3594416..3595123 - 235 39998366 - GSU3277 - lysM domain-containing protein 3257 62.77 0 3595125..3598025 - 966 39998367 - GSU3278 - hypothetical protein 3258 61.67 0 3598194..3600035 + 613 39998368 uvrC GSU3279 - excinuclease ABC, C subunit 3259 55.43 0 3600112..3600627 - 171 39998369 - GSU3280 - thioredoxin-related protein 3260 55.76 0 3600648..3600977 - 109 39998370 trx GSU3281 - thioredoxin 3261 61.78 0 3601183..3601857 + 224 39998371 - GSU3282 - siroheme synthase 3262 59.56 0 3601854..3602669 + 271 39998372 - GSU3283 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 3263 60.38 0 3602688..3603992 + 434 39998373 hemA GSU3284 - glutamyl-tRNA reductase 3264 62.90 0 3604051..3605007 + 318 39998374 hemC GSU3285 - porphobilinogen deaminase 3265 65.18 0 3605124..3606671 + 515 39998375 - GSU3286 - uroporphyrinogen III synthase/methyltransferase 3266 66.28 +1 3606699..3607475 + 258 39998376 - GSU3287 - TatD family hydrolase 3267 63.80 0 3607503..3608270 + 255 39998377 - GSU3288 - thiF family protein 3268 54.42 -1 3608359..3608856 + 165 39998378 - GSU3289 - hypothetical protein 3269 64.68 0 3608974..3609174 - 66 39998379 - GSU3290 - hypothetical protein 3270 63.53 0 3609341..3611383 - 680 39998380 hppA GSU3291 - membrane-bound proton-translocating pyrophosphatase 3271 60.11 0 3611697..3612062 + 121 39998381 - GSU3292 - FUR family transcriptional regulator 3272 55.19 -1 3612260..3612712 + 150 39998382 - GSU3293 - hypothetical protein 3273 58.11 0 3612842..3614056 + 404 39998383 - GSU3294 - rubredoxin-oxygen oxidoreductase, putative 3274 63.41 0 3614102..3615421 + 439 39998384 - GSU3295 - hypothetical protein 3275 62.46 0 3615489..3616868 + 459 39998385 - GSU3296 - glycolate oxidase subunit GlcD, putative 3276 63.74 0 3616956..3618221 + 421 39998386 - GSU3297 - iron-sulfur cluster-binding protein 3277 54.08 -1 3618530..3619093 + 187 39998387 - GSU3298 - Cro/CI family transcriptional regulator 3278 61.70 0 3619432..3621042 + 536 39998388 - GSU3299 - carboxyl transferase domain-containing protein 3279 59.84 0 3621220..3623958 + 912 39998389 - GSU3300 - biotin-requiring enzyme subunit 3280 54.87 -1 3624159..3624794 + 211 39998390 - GSU3301 - hypothetical protein 3281 60.64 0 3624910..3626568 + 552 39998391 - GSU3302 - methylmalonyl-CoA mutase, putative 3282 56.30 0 3626626..3627030 + 134 39998392 - GSU3303 - methylmalonyl-CoA epimerase 3283 58.59 0 3627493..3628866 + 457 39998393 - GSU3304 - LamB porin family protein, putative 3284 52.84 -1 3628992..3629273 + 93 39998394 - GSU3305 - hypothetical protein 3285 59.29 0 3629453..3630970 + 505 39998395 - GSU3306 - hypothetical protein 3286 60.97 0 3631136..3632452 + 438 39998396 hisZ GSU3307 - ATP phosphoribosyltransferase regulatory subunit 3287 60.83 0 3632453..3633754 + 433 39998397 purA GSU3308 - adenylosuccinate synthetase 3288 61.17 0 3634083..3634901 - 272 39998398 - GSU3309 - hypothetical protein 3289 55.30 -1 3634910..3635173 - 87 39998399 - GSU3310 - hypothetical protein 3290 58.47 0 3635189..3636091 + 300 39998400 - GSU3311 - hypothetical protein 3291 61.74 0 3636130..3637083 - 317 39998401 hemH GSU3312 - ferrochelatase 3292 65.30 0 3637191..3638798 - 535 39998402 - GSU3313 - thiolase, putative 3293 61.95 0 3638936..3639952 - 338 39998403 - GSU3314 - putative lipoprotein 3294 64.58 0 3640042..3641286 - 414 39998404 - GSU3315 - major facilitator family transporter 3295 63.47 0 3641415..3642134 + 239 39998405 - GSU3316 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 3296 65.41 0 3642950..3644059 + 369 39998406 - GSU3317 - hypothetical protein 3297 64.25 0 3644195..3645598 - 467 39998407 - GSU3318 - hypothetical protein 3298 62.31 0 3645704..3646300 - 198 39998408 ppiA GSU3319 - peptidyl-prolyl cis-trans isomerase A 3299 65.16 0 3646373..3646969 - 198 39998409 - GSU3320 - ribosomal protein L11 methyltransferase, putative 3300 66.81 +1 3647128..3648537 + 469 39998410 - GSU3321 - phosphoglucomutase/phosphomannomutase family protein 3301 57.23 0 3648635..3649588 + 317 39998411 corA-2 GSU3322 - magnesium and cobalt transport protein CorA 3302 64.33 0 3649590..3651773 + 727 39998412 ppk GSU3323 - polyphosphate kinase 3303 64.16 0 3651999..3652637 - 212 39998413 - GSU3324 - Cro/CI family transcriptional regulator 3304 63.04 0 3652846..3655659 + 937 39998414 uvrA GSU3325 - excinuclease ABC, A subunit 3305 64.89 0 3655690..3656421 - 243 39998415 - GSU3326 - hypothetical protein 3306 61.22 0 3656418..3656711 - 97 39998416 - GSU3327 - hypothetical protein 3307 63.58 0 3656802..3657545 - 247 39998417 - GSU3328 - hypothetical protein 3308 65.28 0 3657542..3658837 - 431 39998418 - GSU3329 - radical SAM domain-containing protein 3309 65.78 0 3658912..3660036 - 374 39998419 - GSU3330 - Oye family NADH-dependent flavin oxidoreductase 3310 64.38 0 3660079..3661521 - 480 39998420 pyk GSU3331 - pyruvate kinase 3311 61.49 0 3661539..3661886 - 115 39998421 - GSU3332 - cytochrome c family protein, putative 3312 64.29 0 3662036..3663046 - 336 161579496 - GSU3333 - 3-deoxy-7-phosphoheptulonate synthase 3313 60.95 0 3663224..3663538 + 104 39998423 - GSU3334 - cytochrome c family protein, putative 3314 64.21 0 3663545..3663829 + 94 39998424 - GSU3335 - hypothetical protein 3315 59.34 0 3663853..3664125 + 90 39998425 - GSU3336 - hypothetical protein 3316 65.60 0 3664119..3664682 + 187 39998426 - GSU3337 - hypothetical protein 3317 61.40 0 3664470..3664583 - 37 39998427 - GSU3338 - hypothetical protein 3318 57.99 0 3664919..3665206 + 95 39998428 groES GSU3339 - co-chaperonin GroES 3319 62.94 0 3665270..3666904 + 544 39998429 groEL GSU3340 - chaperonin GroEL 3320 60.31 0 3667264..3669228 + 654 39998430 - GSU3341 - hypothetical protein 3321 63.24 0 3669269..3670612 + 447 39998431 - GSU3342 - hypothetical protein 3322 60.38 0 3670697..3672319 + 540 39998432 - GSU3343 - SpoVR-like family protein 3323 59.03 0 3672332..3674635 + 767 39998433 - GSU3344 - hypothetical protein 3324 63.69 0 3674668..3675036 + 122 39998434 - GSU3345 - hypothetical protein 3325 60.39 0 3675042..3676874 - 610 39998435 - GSU3346 - potassium uptake protein, Kup system 3326 65.57 0 3677009..3679381 + 790 39998436 - GSU3347 - U32 family peptidase 3327 64.02 0 3679517..3680422 + 301 39998437 - GSU3348 - heat shock protein 33 3328 66.23 +1 3680526..3681209 + 227 39998438 - GSU3349 - cyclase, putative 3329 65.19 0 3681280..3682977 + 565 39998439 - GSU3350 - sensor histidine kinase/GGDEF domain-containing protein 3330 61.45 0 3683067..3683564 + 165 39998440 - GSU3351 - hypothetical protein 3331 64.60 0 3683584..3683970 + 128 39998441 - GSU3352 - hypothetical protein 3332 67.12 +1 3684041..3684931 - 296 39998442 - GSU3353 - RNA pseudouridine synthase family protein 3333 65.33 0 3684928..3685449 - 173 39998443 - GSU3354 - mutT/nudix family protein 3334 56.25 0 3685436..3685579 + 47 39998444 - GSU3355 - hypothetical protein 3335 62.86 0 3685627..3687228 + 533 39998445 - GSU3356 - GGDEF domain/HAMP domain-containing protein 3336 62.56 0 3687303..3689687 + 794 39998446 - GSU3357 - sensory box histidine kinase 3337 61.42 0 3689689..3690126 - 145 39998447 - GSU3358 - hypothetical protein 3338 65.07 0 3690311..3691372 + 353 39998448 - GSU3359 - hypothetical protein 3339 64.92 0 3691369..3692688 + 439 39998449 - GSU3360 - M16 family peptidase 3340 64.34 0 3692660..3694207 - 515 39998450 - GSU3361 - transglutaminase domain-containing protein 3341 61.99 0 3694218..3694559 - 113 39998451 - GSU3362 - hypothetical protein 3342 58.73 0 3694820..3697111 + 763 39998452 - GSU3363 - sigma-54 dependent trancsriptional regulator 3343 48.37 -2 3697200..3697505 + 101 39998453 - GSU3364 - hypothetical protein 3344 60.03 0 3697619..3699064 - 481 39998454 cysS GSU3365 - cysteinyl-tRNA synthetase 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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