version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 264 67.56 +1 270803..272038 - 411 39995374 - GSU0264 - Bcr/CflA subfamily drug resistance transporter 265 64.34 0 272096..272998 - 300 39995375 - GSU0265 - hypothetical protein 266 58.66 0 273393..274316 + 307 39995376 - GSU0266 - LysR family transcriptional regulator 267 64.66 0 274646..275392 + 248 39995377 - GSU0267 - GntR family transcriptional regulator 268 62.83 0 275389..276222 + 277 39995378 - GSU0268 - hypothetical protein 269 63.81 0 276219..276533 + 104 39995379 - GSU0269 - hypothetical protein 270 64.81 0 276632..278461 - 609 39995380 glmS GSU0270 - glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 271 65.27 0 278527..279957 - 476 39995381 glmU GSU0271 - UDP-N-acetylglucosamine pyrophosphorylase 272 59.34 0 280118..280663 + 181 39995382 - GSU0272 - hypothetical protein 273 63.22 0 280807..282576 + 589 39995383 - GSU0273 - radical SAM domain-containing protein 274 59.25 0 282877..284736 + 619 39995384 - GSU0274 - cytochrome c family protein 275 57.29 0 285027..285218 - 63 39995385 - GSU0275 - hypothetical protein 276 60.27 0 285252..286424 - 390 39995386 - GSU0276 - HlyD family secretion protein 277 62.93 0 286417..288585 - 722 39995387 - GSU0277 - ABC transporter, ATP-binding/permease protein 278 61.53 0 288582..289847 - 421 39995388 - GSU0278 - outer membrane efflux protein 279 62.89 0 289984..307683 - 5899 39995389 - GSU0279 - cadherin domain/calx-beta domain-containing protein 280 58.31 0 307916..309268 - 450 39995390 - GSU0280 - Fis family transcriptional regulator 281 59.00 0 311187..311447 + 86 39995391 - GSU0282 - hypothetical protein 282 61.18 0 311626..313428 - 600 39995392 - GSU0283 - sensor histidine kinase 283 57.98 0 313467..313823 - 118 39995393 dksA GSU0284 - dnaK suppressor protein 284 64.52 0 313908..315260 - 450 39995394 radA GSU0285 - DNA repair protein RadA 285 64.41 0 315412..317049 + 545 39995395 - GSU0286 - HEAT repeat-containing PBS lyase 286 61.75 0 317042..318403 + 453 39995396 - GSU0287 - HD domain-containing protein 287 63.77 0 318413..319033 - 206 39995397 - GSU0288 - HEAT repeat-containing PBS lyase 288 60.66 0 319102..319434 + 110 39995398 - GSU0289 - hypothetical protein 289 60.86 0 319532..320512 + 326 39995399 fabH-1 GSU0290 - 3-oxoacyl-(acyl-carrier-protein) synthase III 290 66.01 0 320502..321560 - 352 39995400 - GSU0291 - CheR methyltransferase SAM binding domain-containing protein 291 63.74 0 321610..321951 + 113 39995401 - GSU0292 - hypothetical protein 292 63.45 0 321952..323040 - 362 39995402 cheB-1 GSU0293 - protein-glutamate methylesterase 293 59.32 0 323047..323958 - 303 39995403 - GSU0294 - HD domain-containing protein 294 50.96 -1 323955..324788 - 277 39995404 cheR-1 GSU0295 - chemotaxis protein methyltransferase CheR 295 61.92 0 324839..326671 - 610 39995405 - GSU0296 - chemotaxis protein CheA, putative 296 56.57 0 326720..327214 - 164 39995406 cheW-1 GSU0297 - purine-binding chemotaxis protein CheW 297 58.16 0 327608..328606 + 332 39995407 - GSU0298 - sigma-54 dependent DNA-binding response regulator, interruption-C 298 51.03 -1 328610..329728 - 372 39995408 - GSU0299 - ISGsu1, transposase 299 54.25 -1 329817..330251 + 144 39995409 - GSU0300 - sigma-54 dependent DNA-binding response regulator, interruption-N 300 65.48 0 330437..331027 + 196 39995410 - GSU0301 - lytic murein transglycosylase, putative 301 63.87 0 331170..333134 + 654 39995411 - GSU0302 - hypothetical protein 302 59.11 0 333197..334414 + 405 39995412 - GSU0303 - sensory box protein 303 62.95 0 334411..337044 - 877 39995413 pepN GSU0304 - aminopeptidase N 304 58.69 0 337596..338360 + 254 39995414 hypB GSU0305 - hydrogenase accessory protein HypB 305 64.92 0 338376..340667 + 763 39995415 hypF GSU0306 - hydrogenase maturation protein HypF 306 58.87 0 340674..340904 + 76 39995416 hypC GSU0307 - hydrogenase assembly chaperone hypC/hupF 307 65.84 0 340904..341995 + 363 39995417 hypD GSU0308 - hydrogenase expression/formation protein HypD 308 64.50 0 342016..343029 + 337 39995418 hypE GSU0309 - hydrogenase expression/formation protein HypE 309 61.17 0 343116..343970 + 284 39995419 - GSU0310 - hypothetical protein 310 51.52 -1 344076..344207 - 43 39995420 - GSU0311 - hypothetical protein 311 53.41 -1 344230..344508 + 92 39995421 - GSU0312 - hypothetical protein 312 64.97 0 344584..345351 + 255 39995422 - GSU0313 - dnaJ domain-containing protein 313 60.69 0 345463..346566 + 367 39995423 - GSU0314 - general secretion pathway protein E 314 59.40 0 346535..347002 - 155 39995424 - GSU0315 - hypothetical protein 315 60.78 0 346965..347660 - 231 39995425 - GSU0316 - hypothetical protein 316 58.74 0 348045..348776 + 243 39995426 - GSU0317 - hypothetical protein 317 61.04 0 348883..350127 + 414 39995427 - GSU0318 - M48 family peptidase 318 64.52 0 350163..351002 - 279 39995428 - GSU0319 - hypothetical protein 319 59.38 0 350999..351547 - 182 39995429 - GSU0320 - hypothetical protein 320 65.45 0 351544..352860 - 438 39995430 - GSU0321 - general secretion pathway protein L, putative 321 62.00 0 352860..353780 - 306 39995431 gspK GSU0322 - general secretion pathway protein K 322 62.39 0 353777..354337 - 186 39995432 - GSU0323 - general secretion pathway protein j, putative 323 59.10 0 354384..354740 - 118 39995433 - GSU0324 - general secretion pathway protein I, putative 324 63.83 0 354737..355264 - 175 39995434 - GSU0325 - general secretion pathway protein H, putative 325 60.36 0 355233..355676 - 147 39995435 gspG GSU0326 - general secretion pathway protein G 326 64.11 0 355703..356914 - 403 39995436 - GSU0327 - general secretion pathway protein F 327 64.08 0 356895..358439 - 514 39995437 gspE GSU0328 - general secretion pathway protein E 328 59.98 0 358454..360352 - 632 39995438 - GSU0329 - general secretion pathway protein D, putative 329 60.62 0 360462..361337 - 291 39995439 - GSU0330 - general secretion pathway protein C, putative 330 58.14 0 361506..362900 + 464 39995440 - GSU0331 - trypsin domain/PDZ domain-containing protein 331 59.83 0 362976..364466 + 496 39995441 pepA GSU0332 - aminopeptidase A/I 332 55.80 0 364544..364819 - 91 39995442 atpE GSU0333 - ATP synthase F0, C subunit 333 51.88 -1 364879..365568 - 229 39995443 atpB GSU0334 - ATP synthase F0, A subunit 334 54.26 -1 365573..365959 - 128 39995444 - GSU0335 - hypothetical protein 335 46.75 -2 365931..366176 - 81 39995445 - GSU0336 - hypothetical protein 336 57.32 0 366273..367556 - 427 39995446 hemL GSU0337 - glutamate-1-semialdehyde-2,1-aminomutase 337 48.18 -2 367863..368219 + 118 39995447 nuoA-1 GSU0338 - NADH dehydrogenase I, A subunit 338 55.95 0 368210..368722 + 170 39995448 nuoB GSU0339 - NADH dehydrogenase I, B subunit 339 53.37 -1 368755..369243 + 162 39995449 nuoC GSU0340 - NADH dehydrogenase I, C subunit 340 52.43 -1 369296..370468 + 390 39995450 nouD GSU0341 - NADH dehydrogenase I, D subunit 341 54.60 -1 370496..371017 + 173 39995451 nuoE-1 GSU0342 - NADH dehydrogenase I, E subunit 342 54.00 -1 371053..372828 + 591 39995452 nouF GSU0343 - NADH dehydrogenase I, F subunit 343 54.57 -1 372869..375349 + 826 39995453 - GSU0344 - NADH dehydrogenase I, G subunit, putative 344 52.05 -1 375402..376448 + 348 39995454 nuoH-1 GSU0345 - NADH dehydrogenase I, H subunit 345 47.12 -2 376470..376868 + 132 39995455 nuoI-1 GSU0346 - NADH dehydrogenase I, I subunit 346 50.40 -1 376879..377382 + 167 39995456 nouJ GSU0347 - NADH dehydrogenase I, J subunit 347 45.87 -2 377401..377703 + 100 39995457 nuoK GSU0348 - NADH dehydrogenase I, K subunit 348 51.17 -1 377757..379757 + 666 39995458 nuoL-1 GSU0349 - NADH dehydrogenase I, L subunit 349 51.43 -1 379791..381359 + 522 39995459 nuoM-1 GSU0350 - NADH dehydrogenase I, M subunit 350 51.89 -1 381394..382848 + 484 39995460 nuoN-1 GSU0351 - NADH dehydrogenase I, N subunit 351 56.20 0 382951..383466 + 171 39995461 psaD GSU0352 - thiol peroxidase 352 55.70 0 383605..384051 + 148 39995462 - GSU0353 - hypothetical protein 353 59.36 0 384038..385228 + 396 39995463 - GSU0354 - hypothetical protein 354 56.05 0 385231..385635 + 134 39995464 - GSU0355 - hypothetical protein 355 59.80 0 387351..388952 - 533 39995465 - GSU0357 - cytochrome c family protein 356 61.27 0 388985..389410 - 141 39995466 - GSU0358 - iron-sulfur cluster-binding protein 357 60.42 0 389808..391184 - 458 39995467 - GSU0359 - sensory box protein/sigma-54 dependent transcriptional regulator 358 60.62 0 391444..392733 + 429 39995468 - GSU0360 - OmpA domain-containing protein 359 59.96 0 392844..393737 - 297 39995469 - GSU0361 - peptidyl-prolyl cis-trans isomerase domain-containing protein 360 56.80 0 393987..394442 + 151 39995470 - GSU0362 - hypothetical protein 361 65.40 0 394457..396979 - 840 39995471 dinG GSU0363 - ATP-dependent helicase DinG 362 60.51 0 397076..397351 - 91 39995472 cyd-1 GSU0364 - cytochrome c3 363 60.07 0 397486..397773 - 95 39995473 cyd-2 GSU0365 - cytochrome c3 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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