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Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3070 61.85 0 3396176..3397939 - 587 39998180 dnaG GSU3090 - DNA primase 3071 60.52 0 3397917..3398453 - 178 39998181 - GSU3091 - CvpA family protein 3072 61.45 0 3398549..3398989 - 146 39998182 - GSU3092 - YqeY family protein 3073 48.99 -2 3399113..3399310 - 65 39998183 rpsU GSU3093 - 30S ribosomal protein S21 3074 55.05 -1 3399456..3399782 - 108 39998184 - GSU3094 - phosphoribosyl-ATP pyrophosphohydrolase 3075 64.96 0 3399779..3400540 - 253 39998185 hisF GSU3095 - imidazole glycerol phosphate synthase subunit HisF 3076 64.49 0 3400542..3401276 - 244 39998186 hisA GSU3096 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3077 61.11 0 3401273..3401902 - 209 39998187 hisH GSU3097 - imidazole glycerol phosphate synthase subunit HisH 3078 59.69 0 3401904..3402491 - 195 39998188 hisB GSU3098 - imidazoleglycerol-phosphate dehydratase 3079 62.49 0 3402517..3403569 - 350 39998189 hisC GSU3099 - histidinol-phosphate aminotransferase 3080 65.19 0 3403592..3404881 - 429 39998190 hisD GSU3100 - histidinol dehydrogenase 3081 59.31 0 3404878..3405516 - 212 39998191 hisG GSU3101 - ATP phosphoribosyltransferase catalytic subunit 3082 61.56 0 3405581..3406834 - 417 39998192 murA GSU3102 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3083 63.63 0 3406891..3407745 - 284 39998193 - GSU3103 - HemK family modification methylase 3084 62.36 0 3407771..3408838 - 355 39998194 prfA GSU3104 - peptide chain release factor 1 3085 59.75 0 3408858..3409811 - 317 39998195 - GSU3105 - hypothetical protein 3086 64.23 0 3409808..3410506 - 232 39998196 thyX GSU3106 - FAD-dependent thymidylate synthase 3087 53.54 -1 3410597..3410794 - 65 39998197 rpmE GSU3107 - 50S ribosomal protein L31 3088 58.65 0 3410940..3412187 - 415 39998198 rho GSU3108 - transcription termination factor Rho 3089 61.89 0 3412645..3413418 + 257 39998199 - GSU3109 - IclR family transcriptional regulator 3090 60.84 0 3413447..3413755 - 102 39998200 - GSU3110 - hypothetical protein 3091 56.60 0 3413770..3414057 - 95 39998201 - GSU3111 - hypothetical protein 3092 62.33 0 3414131..3416368 - 745 39998202 - GSU3112 - cell division protein FtsK, putative 3093 62.67 0 3416422..3418023 - 533 39998203 - GSU3113 - metallo-beta-lactamase family protein 3094 64.18 0 3418114..3418515 - 133 39998204 - GSU3114 - hypothetical protein 3095 68.89 +1 3418522..3418701 - 59 39998205 - GSU3115 - hypothetical protein 3096 64.68 0 3418703..3419407 - 234 39998206 - GSU3116 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 3097 64.40 0 3419688..3420128 + 146 39998207 ssb-2 GSU3117 - single-strand binding protein 3098 62.43 0 3420191..3420874 - 227 39998208 - GSU3118 - DNA-binding response regulator 3099 65.12 0 3420871..3422421 - 516 39998209 - GSU3119 - sensor histidine kinase 3100 63.10 0 3422490..3422966 + 158 39998210 - GSU3120 - hypothetical protein 3101 60.43 0 3423035..3423499 + 154 39998211 - GSU3121 - EF hand domain-containing protein 3102 59.36 0 3423529..3424596 - 355 39998212 - GSU3122 - metallo-beta-lactamase family protein 3103 58.06 0 3424668..3425039 - 123 39998213 - GSU3123 - aldehyde ferredoxin oxidoreductase domain-containing protein 3104 61.33 0 3425036..3425485 - 149 39998214 - GSU3124 - iron-sulfur cluster-binding protein 3105 64.12 0 3425543..3426601 - 352 39998215 - GSU3125 - alcohol dehydrogenase, zinc-containing 3106 63.58 0 3426711..3427715 - 334 39998216 - GSU3126 - aldo/keto reductase family oxidoreductase 3107 63.58 0 3427883..3428821 + 312 39998217 - GSU3127 - AraC family transcriptional regulator 3108 56.28 0 3428934..3429116 + 60 39998218 - GSU3128 - hypothetical protein 3109 66.00 0 3429286..3430644 + 452 39998219 - GSU3129 - MATE efflux family protein 3110 64.71 0 3430691..3431353 - 220 39998220 - GSU3130 - putative lipoprotein 3111 66.78 +1 3431433..3434960 - 1175 39998221 - GSU3131 - hypothetical protein 3112 61.40 0 3435206..3435490 - 94 39998222 huP-2 GSU3132 - DNA-binding protein HU 3113 61.23 0 3435686..3438076 - 796 39998223 - GSU3133 - 1A family penicillin-binding protein 3114 64.24 0 3438253..3439281 + 342 39998224 - GSU3134 - hypothetical protein 3115 61.49 0 3439285..3439767 - 160 39998225 lspA GSU3135 - lipoprotein signal peptidase 3116 63.82 0 3439773..3442544 - 923 39998226 ileS GSU3136 - isoleucyl-tRNA synthetase 3117 65.48 0 3442747..3444522 + 591 39998227 - GSU3137 - cytochrome c family protein 3118 61.99 0 3444551..3446005 + 484 39998228 - GSU3138 - sensor histidine kinase/response regulator 3119 60.31 0 3446013..3446861 - 282 39998229 - GSU3139 - hypothetical protein 3120 66.43 +1 3446890..3448962 - 690 39998230 - GSU3140 - peptidase, M1 family protein 3121 66.04 0 3449070..3449546 - 158 39998231 - GSU3141 - hypothetical protein 3122 62.35 0 3449646..3450665 - 339 39998232 - GSU3142 - 3-deoxy-7-phosphoheptulonate synthase 3123 61.38 0 3451151..3451585 + 144 39998233 - GSU3143 - peptidyl-prolyl cis-trans isomerase, FKBP-type, putative 3124 64.43 0 3451680..3452888 + 402 39998234 - GSU3144 - hypothetical protein 3125 64.60 0 3453011..3453445 - 144 39998235 - GSU3145 - MOSC domain-containing protein 3126 62.59 0 3453478..3454458 - 326 39998236 - GSU3146 - molybdenum cofactor biosynthesis protein A, putative 3127 61.18 0 3454545..3455054 - 169 39998237 mobB GSU3147 - molybdopterin-guanine dinucleotide biosynthesis protein MobB 3128 63.29 0 3455690..3457705 - 671 39998238 - GSU3148 - sensor histidine kinase 3129 64.17 0 3457683..3457802 - 39 39998239 - GSU3149 - hypothetical protein 3130 66.67 +1 3457827..3458321 - 164 39998240 - GSU3150 - HPP family protein 3131 66.67 +1 3458395..3459048 - 217 39998241 - GSU3151 - hypothetical protein 3132 67.11 +1 3459198..3459653 - 151 39998242 - GSU3152 - sensory box protein 3133 65.28 0 3459731..3460738 - 335 39998243 - GSU3153 - iron-sulfur cluster-binding protein 3134 62.12 0 3460814..3462286 - 490 39998244 - GSU3154 - cytochrome c nitrite reductase, catalytic subunit NrfA, putative 3135 66.67 +1 3462332..3462736 - 134 39998245 - GSU3155 - cytochrome c nitrite reductase, small subunit NrfH, putative 3136 59.47 0 3463071..3464168 + 365 39998246 - GSU3156 - methyl-accepting chemotaxis protein, putative 3137 66.54 +1 3464329..3465129 + 266 39998247 - GSU3157 - alpha/beta fold family hydrolase 3138 66.02 0 3465190..3466116 - 308 39998248 cysM GSU3158 - cysteine synthase B 3139 69.01 +1 3466266..3466820 + 184 39998249 - GSU3159 - mutT/nudix family protein 3140 68.79 +1 3466826..3467578 + 250 39998250 - GSU3160 - RNA pseudouridine synthase family protein 3141 64.83 0 3467663..3468151 + 162 39998251 msrA GSU3161 - methionine sulfoxide reductase A 3142 67.81 +1 3468247..3469293 + 348 39998252 - GSU3162 - L-allo-threonine aldolase 3143 63.27 0 3469290..3469436 + 48 39998253 - GSU3163 - hypothetical protein 3144 64.25 0 3469452..3469658 + 68 39998254 - GSU3164 - hypothetical protein 3145 62.26 0 3469894..3470688 + 264 39998255 - GSU3165 - hypothetical protein 3146 65.68 0 3470702..3474154 + 1150 39998256 - GSU3166 - hypothetical protein 3147 65.86 0 3474201..3476570 + 789 39998257 - GSU3167 - hypothetical protein 3148 67.25 +1 3476577..3477770 + 397 39998258 - GSU3168 - 3-oxoacyl-(acyl carrier protein) synthase 3149 65.62 0 3477770..3478438 + 222 39998259 - GSU3169 - hypothetical protein 3150 56.37 0 3478435..3479463 + 342 39998260 - GSU3170 - hypothetical protein 3151 61.11 0 3479479..3481098 + 539 39998261 - GSU3171 - hypothetical protein 3152 58.64 0 3481200..3481685 + 161 39998262 - GSU3172 - hypothetical protein 3153 60.47 0 3481696..3483180 + 494 39998263 - GSU3173 - hypothetical protein 3154 55.56 0 3483262..3483747 + 161 39998264 hcP-2 GSU3174 - hcp protein 3155 46.05 -2 3483866..3484321 + 151 39998265 - GSU3175 - hypothetical protein 3156 50.22 -1 3484376..3485293 + 305 39998266 - GSU3176 - lysM domain-containing protein 3157 57.31 0 3485350..3487443 + 697 39998267 - GSU3177 - Rhs family protein 3158 53.62 -1 3487475..3487750 + 91 39998268 - GSU3178 - hypothetical protein 3159 53.66 -1 3487734..3487979 + 81 39998269 - GSU3179 - hypothetical protein 3160 59.97 0 3488000..3489253 + 417 39998270 - GSU3180 - hypothetical protein 3161 60.06 0 3489250..3490293 + 347 39998271 - GSU3181 - 3-oxoacyl-(acyl carrier protein) synthase 3162 51.44 -1 3490313..3490693 + 126 39998272 - GSU3182 - hypothetical protein 3163 51.32 -1 3490745..3491122 + 125 39998273 - GSU3183 - hypothetical protein 3164 55.14 -1 3491320..3493002 + 560 39998274 - GSU3184 - hypothetical protein 3165 45.34 -2 3492999..3494222 + 407 39998275 - GSU3185 - hypothetical protein 3166 62.00 0 3494464..3495471 + 335 39998276 - GSU3186 - hypothetical protein 3167 57.81 0 3495602..3495793 + 63 39998277 - GSU3187 - ferredoxin family protein 3168 61.01 0 3495860..3496018 + 52 39998278 - GSU3188 - rubredoxin 3169 55.83 0 3496070..3496438 - 122 39998279 - GSU3189 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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