version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3024 61.30 0 3347451..3348884 - 477 39998134 flgK GSU3043 - flagellar hook-associated protein FlgK 3025 63.62 0 3348886..3349377 - 163 39998135 - GSU3044 - hypothetical protein 3026 64.24 0 3349396..3349683 - 95 39998136 flgM GSU3045 - negative regulator of flagellin synthesis FlgM 3027 64.30 0 3349686..3350066 - 126 39998137 - GSU3046 - flagellar protein FlgJ-like protein 3028 62.96 0 3350209..3351315 - 368 39998138 flgI GSU3047 - flagellar basal body P-ring protein 3029 61.71 0 3351462..3352127 - 221 39998139 flgH GSU3048 - flagellar L-ring protein FlgH 3030 50.83 -1 3352126..3352245 + 39 39998140 - GSU3049 - hypothetical protein 3031 63.86 0 3352242..3352988 - 248 39998141 - GSU3050 - flagella basal body P-ring formation protein flgA, putative 3032 63.24 0 3352996..3353784 - 262 39998142 flgG GSU3051 - flagellar basal body rod protein FlgG 3033 60.77 0 3353883..3354611 - 242 39998143 flgG-2 GSU3052 - flagellar basal-body rod protein FlgG 3034 59.10 0 3354638..3355390 - 250 39998144 fliA GSU3053 - RNA polymerase sigma factor for flagellar operon 3035 61.18 0 3355387..3356316 - 309 39998145 - GSU3054 - ParA family protein 3036 63.35 0 3356313..3357638 - 441 39998146 - GSU3055 - flagellar biosynthetic protein FlhF, putative 3037 62.31 0 3357658..3359748 - 696 39998147 flhA GSU3056 - flagellar biosynthesis protein FlhA 3038 66.03 0 3360147..3361559 - 470 39998148 gltA GSU3057 - putative oxidoreductase 3039 64.76 0 3361556..3362392 - 278 39998149 - GSU3058 - ferredoxin--NADP(+) reductase subunit alpha 3040 62.13 0 3362756..3363637 - 293 39998150 - GSU3059 - radical SAM domain-containing protein 3041 56.86 0 3363768..3364379 + 203 39998151 - GSU3060 - TetR family transcriptional regulator 3042 62.43 0 3364460..3366652 + 730 39998152 shc-2 GSU3061 - squalene-hopene cyclase 3043 62.94 0 3366639..3368330 - 563 39998153 - GSU3062 - radical SAM domain-containing protein 3044 62.15 0 3368488..3369639 - 383 39998154 ftsZ GSU3063 - cell division protein FtsZ 3045 62.30 0 3369691..3370926 - 411 39998155 ftsA GSU3064 - cell division protein FtsA 3046 63.06 0 3370942..3371772 - 276 39998156 ftsQ GSU3065 - cell division protein FtsQ 3047 62.78 0 3371784..3372734 - 316 39998157 ddl GSU3066 - D-alanine--D-alanine ligase 3048 64.82 0 3372764..3373630 - 288 39998158 murB GSU3067 - UDP-N-acetylenolpyruvoylglucosamine reductase 3049 62.20 0 3373685..3375073 - 462 39998159 murC GSU3068 - UDP-N-acetylmuramate--alanine ligase 3050 63.65 0 3375076..3376170 - 364 39998160 murG GSU3069 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3051 59.06 0 3376167..3377231 - 354 39998161 - GSU3070 - cell cycle protein FtsW 3052 65.42 0 3377285..3378643 - 452 39998162 murD GSU3071 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 3053 58.96 0 3378645..3379721 - 358 39998163 mraY GSU3072 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3054 62.48 0 3381149..3382678 - 509 39998164 murE GSU3074 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase 3055 59.98 0 3382710..3384683 - 657 39998165 - GSU3075 - penicillin-binding protein 3056 59.52 0 3384680..3385015 - 111 39998166 - GSU3076 - cell division protein FtsL, putative 3057 63.03 0 3385043..3385978 - 311 39998167 mraW GSU3077 - S-adenosyl-methyltransferase MraW 3058 55.77 0 3385982..3386458 - 158 39998168 - GSU3078 - cell division protein MraZ 3059 59.54 0 3386899..3387249 - 116 39998169 - GSU3079 - hypothetical protein 3060 59.02 0 3387299..3387847 - 182 39998170 - GSU3080 - hypothetical protein 3061 62.39 0 3388257..3388607 - 116 39998171 - GSU3081 - hypothetical protein 3062 56.20 0 3388646..3389008 + 120 39998172 - GSU3082 - ISGsu7, transposase OrfA 3063 56.79 0 3389005..3389895 + 296 39998173 - GSU3083 - ISGsu7, transposase OrfB 3064 56.49 0 3389874..3390335 - 153 39998174 - GSU3084 - hypothetical protein 3065 60.46 0 3390382..3391509 - 375 39998175 - GSU3085 - hypothetical protein 3066 63.86 0 3391779..3392954 - 391 39998176 - GSU3086 - hypothetical protein 3067 61.35 0 3392958..3393785 - 275 39998177 - GSU3087 - Sir2 family transcriptional regulator 3068 60.46 0 3393821..3394303 - 160 39998178 - GSU3088 - YbaK/EbsC protein 3069 57.84 0 3394412..3396145 - 577 39998179 rpoD GSU3089 - RNA polymerase sigma factor RpoD 3070 61.85 0 3396176..3397939 - 587 39998180 dnaG GSU3090 - DNA primase 3071 60.52 0 3397917..3398453 - 178 39998181 - GSU3091 - CvpA family protein 3072 61.45 0 3398549..3398989 - 146 39998182 - GSU3092 - YqeY family protein 3073 48.99 -2 3399113..3399310 - 65 39998183 rpsU GSU3093 - 30S ribosomal protein S21 3074 55.05 -1 3399456..3399782 - 108 39998184 - GSU3094 - phosphoribosyl-ATP pyrophosphohydrolase 3075 64.96 0 3399779..3400540 - 253 39998185 hisF GSU3095 - imidazole glycerol phosphate synthase subunit HisF 3076 64.49 0 3400542..3401276 - 244 39998186 hisA GSU3096 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3077 61.11 0 3401273..3401902 - 209 39998187 hisH GSU3097 - imidazole glycerol phosphate synthase subunit HisH 3078 59.69 0 3401904..3402491 - 195 39998188 hisB GSU3098 - imidazoleglycerol-phosphate dehydratase 3079 62.49 0 3402517..3403569 - 350 39998189 hisC GSU3099 - histidinol-phosphate aminotransferase 3080 65.19 0 3403592..3404881 - 429 39998190 hisD GSU3100 - histidinol dehydrogenase 3081 59.31 0 3404878..3405516 - 212 39998191 hisG GSU3101 - ATP phosphoribosyltransferase catalytic subunit 3082 61.56 0 3405581..3406834 - 417 39998192 murA GSU3102 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3083 63.63 0 3406891..3407745 - 284 39998193 - GSU3103 - HemK family modification methylase 3084 62.36 0 3407771..3408838 - 355 39998194 prfA GSU3104 - peptide chain release factor 1 3085 59.75 0 3408858..3409811 - 317 39998195 - GSU3105 - hypothetical protein 3086 64.23 0 3409808..3410506 - 232 39998196 thyX GSU3106 - FAD-dependent thymidylate synthase 3087 53.54 -1 3410597..3410794 - 65 39998197 rpmE GSU3107 - 50S ribosomal protein L31 3088 58.65 0 3410940..3412187 - 415 39998198 rho GSU3108 - transcription termination factor Rho 3089 61.89 0 3412645..3413418 + 257 39998199 - GSU3109 - IclR family transcriptional regulator 3090 60.84 0 3413447..3413755 - 102 39998200 - GSU3110 - hypothetical protein 3091 56.60 0 3413770..3414057 - 95 39998201 - GSU3111 - hypothetical protein 3092 62.33 0 3414131..3416368 - 745 39998202 - GSU3112 - cell division protein FtsK, putative 3093 62.67 0 3416422..3418023 - 533 39998203 - GSU3113 - metallo-beta-lactamase family protein 3094 64.18 0 3418114..3418515 - 133 39998204 - GSU3114 - hypothetical protein 3095 68.89 +1 3418522..3418701 - 59 39998205 - GSU3115 - hypothetical protein 3096 64.68 0 3418703..3419407 - 234 39998206 - GSU3116 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 3097 64.40 0 3419688..3420128 + 146 39998207 ssb-2 GSU3117 - single-strand binding protein 3098 62.43 0 3420191..3420874 - 227 39998208 - GSU3118 - DNA-binding response regulator 3099 65.12 0 3420871..3422421 - 516 39998209 - GSU3119 - sensor histidine kinase 3100 63.10 0 3422490..3422966 + 158 39998210 - GSU3120 - hypothetical protein 3101 60.43 0 3423035..3423499 + 154 39998211 - GSU3121 - EF hand domain-containing protein 3102 59.36 0 3423529..3424596 - 355 39998212 - GSU3122 - metallo-beta-lactamase family protein 3103 58.06 0 3424668..3425039 - 123 39998213 - GSU3123 - aldehyde ferredoxin oxidoreductase domain-containing protein 3104 61.33 0 3425036..3425485 - 149 39998214 - GSU3124 - iron-sulfur cluster-binding protein 3105 64.12 0 3425543..3426601 - 352 39998215 - GSU3125 - alcohol dehydrogenase, zinc-containing 3106 63.58 0 3426711..3427715 - 334 39998216 - GSU3126 - aldo/keto reductase family oxidoreductase 3107 63.58 0 3427883..3428821 + 312 39998217 - GSU3127 - AraC family transcriptional regulator 3108 56.28 0 3428934..3429116 + 60 39998218 - GSU3128 - hypothetical protein 3109 66.00 0 3429286..3430644 + 452 39998219 - GSU3129 - MATE efflux family protein 3110 64.71 0 3430691..3431353 - 220 39998220 - GSU3130 - putative lipoprotein 3111 66.78 +1 3431433..3434960 - 1175 39998221 - GSU3131 - hypothetical protein 3112 61.40 0 3435206..3435490 - 94 39998222 huP-2 GSU3132 - DNA-binding protein HU 3113 61.23 0 3435686..3438076 - 796 39998223 - GSU3133 - 1A family penicillin-binding protein 3114 64.24 0 3438253..3439281 + 342 39998224 - GSU3134 - hypothetical protein 3115 61.49 0 3439285..3439767 - 160 39998225 lspA GSU3135 - lipoprotein signal peptidase 3116 63.82 0 3439773..3442544 - 923 39998226 ileS GSU3136 - isoleucyl-tRNA synthetase 3117 65.48 0 3442747..3444522 + 591 39998227 - GSU3137 - cytochrome c family protein 3118 61.99 0 3444551..3446005 + 484 39998228 - GSU3138 - sensor histidine kinase/response regulator 3119 60.31 0 3446013..3446861 - 282 39998229 - GSU3139 - hypothetical protein 3120 66.43 +1 3446890..3448962 - 690 39998230 - GSU3140 - peptidase, M1 family protein 3121 66.04 0 3449070..3449546 - 158 39998231 - GSU3141 - hypothetical protein 3122 62.35 0 3449646..3450665 - 339 39998232 - GSU3142 - 3-deoxy-7-phosphoheptulonate synthase 3123 61.38 0 3451151..3451585 + 144 39998233 - GSU3143 - peptidyl-prolyl cis-trans isomerase, FKBP-type, putative 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0