version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2976 64.70 0 3289047..3289757 - 236 39998086 cobI GSU2995 - precorrin-2 C20-methyltransferase 2977 63.55 0 3289754..3290971 - 405 39998087 cobL GSU2996 - precorrin-6y c5,15-methyltransferase 2978 68.69 +1 3291016..3292104 - 362 39998088 cbiD GSU2997 - cobalamin biosynthesis protein CbiD 2979 64.09 0 3292111..3292653 - 180 39998089 - GSU2998 - nitroimidazole resistance protein, putative 2980 68.07 +1 3292653..3293294 - 213 39998090 cobH GSU2999 - precorrin-8X methylmutase 2981 65.62 0 3293294..3293677 - 127 39998091 - GSU3000 - cbiX protein 2982 65.12 0 3293679..3294518 - 279 39998092 - GSU3001 - cobalt ABC transporter, ATP-binding protein 2983 67.86 +1 3294515..3295270 - 251 39998093 - GSU3002 - cobalt ABC transporter, permease protein 2984 61.82 0 3295267..3295782 - 171 39998094 - GSU3003 - hypothetical protein 2985 66.46 +1 3295769..3296734 - 321 161579497 - GSU3004 - cobalt transport protein CbiM 2986 67.05 +1 3297117..3298424 - 435 39998096 thiC-2 GSU3005 - thiamine biosynthesis protein ThiC 2987 66.45 +1 3298421..3299815 - 464 39998097 cobB GSU3006 - cobyrinic acid a,c-diamide synthase 2988 63.76 0 3299819..3300472 - 217 39998098 - GSU3007 - phosphoglycerate mutase family protein, putative 2989 68.02 +1 3300552..3301292 - 246 39998099 cobS GSU3008 - cobalamin 5'-phosphate synthase 2990 64.59 0 3301289..3302347 - 352 39998100 cobT GSU3009 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2991 64.93 0 3302370..3302888 - 172 39998101 cobU GSU3010 - bifunctional cobalamin biosynthesis protein CobU 2992 56.25 0 3302867..3303058 - 63 39998102 - GSU3011 - hypothetical protein 2993 53.94 -1 3303119..3303283 + 54 39998103 - GSU3012 - hypothetical protein 2994 62.80 0 3303260..3303880 - 206 39998104 - GSU3013 - GTPase EngB 2995 57.43 0 3303989..3304897 + 302 39998105 - GSU3014 - HD domain-containing protein 2996 59.84 0 3305088..3305468 - 126 39998106 - GSU3015 - flagellin FlaG, putative 2997 62.65 0 3305627..3311104 - 1825 39998107 - GSU3016 - hypothetical protein 2998 55.38 0 3311632..3311826 + 64 39998108 - GSU3017 - hypothetical protein 2999 42.16 -2 3311879..3312637 + 252 39998109 - GSU3018 - hypothetical protein 3000 49.11 -2 3312678..3314636 + 652 39998110 - GSU3019 - dehydrogenase, E1 component, alpha and beta subunits 3001 49.37 -2 3314633..3315748 + 371 39998111 - GSU3020 - hexapeptide transferase family protein 3002 54.77 -1 3315770..3316954 + 394 39998112 - GSU3021 - DegT/DnrJ/EryC1/StrS family protein 3003 52.62 -1 3316979..3320353 + 1124 39998113 - GSU3022 - hypothetical protein 3004 60.34 0 3320350..3327555 + 2401 39998114 - GSU3023 - glycosyl transferase, group 1/2 family protein 3005 66.35 +1 3327458..3329374 + 638 39998115 - GSU3024 - hypothetical protein 3006 66.09 +1 3329371..3330924 + 517 39998116 - GSU3025 - heptosyltransferase family protein 3007 57.35 0 3330990..3331268 + 92 39998117 - GSU3026 - flagellar protein FlbD, putative 3008 59.08 0 3331289..3332053 + 254 39998118 - GSU3027 - chemotaxis MotA protein 3009 60.67 0 3332063..3332863 + 266 39998119 motB GSU3028 - chemotaxis MotB protein 3010 64.17 0 3332939..3336349 - 1136 39998120 - GSU3029 - 2-acyl-glycerophospho-ethanolamine acyltransferase 3011 65.13 0 3336366..3337343 - 325 39998121 - GSU3030 - hypothetical protein 3012 61.85 0 3337484..3339019 + 511 39998122 - GSU3031 - sigma-54 dependent transcriptional regulator 3013 64.07 0 3339016..3340593 - 525 39998123 - GSU3032 - hypothetical protein 3014 62.56 0 3340671..3341474 - 267 39998124 - GSU3033 - hypothetical protein 3015 62.28 0 3341490..3341945 - 151 39998125 - GSU3034 - hypothetical protein 3016 60.52 0 3342011..3342433 - 140 39998126 - GSU3035 - hypothetical protein 3017 55.63 0 3342430..3342864 - 144 39998127 fliS GSU3036 - flagellar protein FliS 3018 58.01 0 3342898..3344307 - 469 39998128 fliD GSU3037 - flagellar hook-associated protein 2 3019 65.34 0 3344677..3345507 - 276 39998129 fliC GSU3038 - flagellin FliC 3020 50.00 -1 3345608..3345811 + 67 39998130 - GSU3039 - hypothetical protein 3021 59.17 0 3345798..3346277 - 159 39998131 - GSU3040 - flagellar assembly protein FliW 3022 54.58 -1 3346282..3346521 - 79 39998132 csrA GSU3041 - carbon storage regulator 3023 59.42 0 3346545..3347441 - 298 39998133 flgL GSU3042 - flagellar hook-associated protein FlgL 3024 61.30 0 3347451..3348884 - 477 39998134 flgK GSU3043 - flagellar hook-associated protein FlgK 3025 63.62 0 3348886..3349377 - 163 39998135 - GSU3044 - hypothetical protein 3026 64.24 0 3349396..3349683 - 95 39998136 flgM GSU3045 - negative regulator of flagellin synthesis FlgM 3027 64.30 0 3349686..3350066 - 126 39998137 - GSU3046 - flagellar protein FlgJ-like protein 3028 62.96 0 3350209..3351315 - 368 39998138 flgI GSU3047 - flagellar basal body P-ring protein 3029 61.71 0 3351462..3352127 - 221 39998139 flgH GSU3048 - flagellar L-ring protein FlgH 3030 50.83 -1 3352126..3352245 + 39 39998140 - GSU3049 - hypothetical protein 3031 63.86 0 3352242..3352988 - 248 39998141 - GSU3050 - flagella basal body P-ring formation protein flgA, putative 3032 63.24 0 3352996..3353784 - 262 39998142 flgG GSU3051 - flagellar basal body rod protein FlgG 3033 60.77 0 3353883..3354611 - 242 39998143 flgG-2 GSU3052 - flagellar basal-body rod protein FlgG 3034 59.10 0 3354638..3355390 - 250 39998144 fliA GSU3053 - RNA polymerase sigma factor for flagellar operon 3035 61.18 0 3355387..3356316 - 309 39998145 - GSU3054 - ParA family protein 3036 63.35 0 3356313..3357638 - 441 39998146 - GSU3055 - flagellar biosynthetic protein FlhF, putative 3037 62.31 0 3357658..3359748 - 696 39998147 flhA GSU3056 - flagellar biosynthesis protein FlhA 3038 66.03 0 3360147..3361559 - 470 39998148 gltA GSU3057 - putative oxidoreductase 3039 64.76 0 3361556..3362392 - 278 39998149 - GSU3058 - ferredoxin--NADP(+) reductase subunit alpha 3040 62.13 0 3362756..3363637 - 293 39998150 - GSU3059 - radical SAM domain-containing protein 3041 56.86 0 3363768..3364379 + 203 39998151 - GSU3060 - TetR family transcriptional regulator 3042 62.43 0 3364460..3366652 + 730 39998152 shc-2 GSU3061 - squalene-hopene cyclase 3043 62.94 0 3366639..3368330 - 563 39998153 - GSU3062 - radical SAM domain-containing protein 3044 62.15 0 3368488..3369639 - 383 39998154 ftsZ GSU3063 - cell division protein FtsZ 3045 62.30 0 3369691..3370926 - 411 39998155 ftsA GSU3064 - cell division protein FtsA 3046 63.06 0 3370942..3371772 - 276 39998156 ftsQ GSU3065 - cell division protein FtsQ 3047 62.78 0 3371784..3372734 - 316 39998157 ddl GSU3066 - D-alanine--D-alanine ligase 3048 64.82 0 3372764..3373630 - 288 39998158 murB GSU3067 - UDP-N-acetylenolpyruvoylglucosamine reductase 3049 62.20 0 3373685..3375073 - 462 39998159 murC GSU3068 - UDP-N-acetylmuramate--alanine ligase 3050 63.65 0 3375076..3376170 - 364 39998160 murG GSU3069 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 3051 59.06 0 3376167..3377231 - 354 39998161 - GSU3070 - cell cycle protein FtsW 3052 65.42 0 3377285..3378643 - 452 39998162 murD GSU3071 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 3053 58.96 0 3378645..3379721 - 358 39998163 mraY GSU3072 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3054 62.48 0 3381149..3382678 - 509 39998164 murE GSU3074 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase 3055 59.98 0 3382710..3384683 - 657 39998165 - GSU3075 - penicillin-binding protein 3056 59.52 0 3384680..3385015 - 111 39998166 - GSU3076 - cell division protein FtsL, putative 3057 63.03 0 3385043..3385978 - 311 39998167 mraW GSU3077 - S-adenosyl-methyltransferase MraW 3058 55.77 0 3385982..3386458 - 158 39998168 - GSU3078 - cell division protein MraZ 3059 59.54 0 3386899..3387249 - 116 39998169 - GSU3079 - hypothetical protein 3060 59.02 0 3387299..3387847 - 182 39998170 - GSU3080 - hypothetical protein 3061 62.39 0 3388257..3388607 - 116 39998171 - GSU3081 - hypothetical protein 3062 56.20 0 3388646..3389008 + 120 39998172 - GSU3082 - ISGsu7, transposase OrfA 3063 56.79 0 3389005..3389895 + 296 39998173 - GSU3083 - ISGsu7, transposase OrfB 3064 56.49 0 3389874..3390335 - 153 39998174 - GSU3084 - hypothetical protein 3065 60.46 0 3390382..3391509 - 375 39998175 - GSU3085 - hypothetical protein 3066 63.86 0 3391779..3392954 - 391 39998176 - GSU3086 - hypothetical protein 3067 61.35 0 3392958..3393785 - 275 39998177 - GSU3087 - Sir2 family transcriptional regulator 3068 60.46 0 3393821..3394303 - 160 39998178 - GSU3088 - YbaK/EbsC protein 3069 57.84 0 3394412..3396145 - 577 39998179 rpoD GSU3089 - RNA polymerase sigma factor RpoD 3070 61.85 0 3396176..3397939 - 587 39998180 dnaG GSU3090 - DNA primase 3071 60.52 0 3397917..3398453 - 178 39998181 - GSU3091 - CvpA family protein 3072 61.45 0 3398549..3398989 - 146 39998182 - GSU3092 - YqeY family protein 3073 48.99 -2 3399113..3399310 - 65 39998183 rpsU GSU3093 - 30S ribosomal protein S21 3074 55.05 -1 3399456..3399782 - 108 39998184 - GSU3094 - phosphoribosyl-ATP pyrophosphohydrolase 3075 64.96 0 3399779..3400540 - 253 39998185 hisF GSU3095 - imidazole glycerol phosphate synthase subunit HisF 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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