version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2900 62.95 0 3218541..3219374 - 277 39998010 - GSU2919 - transketolase, N-terminal subunit 2901 50.45 -1 3219402..3219512 + 36 39998011 - GSU2920 - hypothetical protein 2902 66.38 +1 3219940..3222354 - 804 39998012 - GSU2921 - 5-methyltetrahydrofolate-homocysteine methyltransferase, truncation 2903 62.96 0 3222448..3223041 - 197 39998013 - GSU2922 - hypothetical protein 2904 63.61 0 3223038..3223856 - 272 39998014 murI GSU2923 - glutamate racemase 2905 52.34 -1 3224073..3224414 + 113 39998015 - GSU2924 - hypothetical protein 2906 62.56 0 3224422..3225396 + 324 39998016 - GSU2925 - hypothetical protein 2907 65.35 0 3225393..3226154 + 253 39998017 - GSU2926 - (R)-2-hydroxyglutaryl-CoA dehydratase activator, putative 2908 54.74 -1 3226255..3226539 + 94 39998018 - GSU2927 - cytochrome c, putative 2909 63.08 0 3226547..3227131 + 194 39998019 - GSU2928 - hypothetical protein 2910 57.58 0 3227205..3227600 + 131 39998020 - GSU2929 - hypothetical protein 2911 65.70 0 3227678..3228295 - 205 39998021 - GSU2930 - cytochrome c family protein 2912 68.60 +1 3228374..3228838 + 154 39998022 - GSU2931 - hypothetical protein 2913 62.16 0 3228939..3229559 - 206 39998023 - GSU2932 - cytochrome b/b6 2914 66.92 +1 3229556..3229951 - 131 39998024 - GSU2933 - cytochrome b/b6 complex, iron-sulfur subunit 2915 68.90 +1 3229906..3231159 - 417 39998025 - GSU2934 - cytochrome c family protein 2916 65.10 0 3231104..3233077 - 657 39998026 - GSU2935 - cytochrome c family protein 2917 58.26 0 3233101..3233421 - 106 39998027 - GSU2936 - hypothetical protein 2918 60.10 0 3233479..3234453 - 324 39998028 - GSU2937 - cytochrome c family protein 2919 60.63 0 3234566..3234880 - 104 39998029 - GSU2938 - hypothetical protein 2920 59.05 0 3234920..3236140 - 406 39998030 - GSU2939 - outer membrane porin FmdC, putative 2921 59.63 0 3236208..3237614 - 468 39998031 - GSU2940 - putative lipoprotein 2922 59.62 0 3237885..3238820 + 311 39998032 - GSU2941 - LysR family transcriptional regulator 2923 62.45 0 3238978..3240612 + 544 39998033 - GSU2942 - methyl-accepting chemotaxis protein 2924 63.70 0 3240768..3241205 + 145 39998034 - GSU2943 - hypothetical protein 2925 61.65 0 3241463..3242758 + 431 39998035 - GSU2944 - (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit, putative 2926 67.07 +1 3242763..3243509 + 248 39998036 - GSU2945 - (R)-2-hydroxyglutaryl-CoA dehydratase activator, putative 2927 62.95 0 3243689..3244360 + 223 39998037 - GSU2946 - DNA-binding heavy metal response regulator 2928 63.87 0 3244341..3245768 + 475 39998038 - GSU2947 - sensor histidine kinase 2929 62.25 0 3245954..3247855 + 633 39998039 - GSU2948 - hypothetical protein 2930 65.51 0 3247858..3248718 + 286 39998040 - GSU2949 - PAP2 family protein 2931 65.24 0 3248816..3250432 + 538 39998041 - GSU2950 - ABC transporter, permease protein 2932 66.74 +1 3250442..3251749 + 435 39998042 - GSU2951 - ABC transporter, ATP-binding protein 2933 61.99 0 3251800..3252141 + 113 39998043 - GSU2952 - ArsR family transcriptional regulator 2934 63.12 0 3252197..3252619 + 140 39998044 arsC GSU2953 - arsenate reductase 2935 61.82 0 3252612..3253664 + 350 39998045 acr3 GSU2954 - arsenical-resistance protein 2936 57.17 0 3253679..3254626 + 315 39998046 - GSU2955 - hypothetical protein 2937 51.48 -1 3254643..3254879 + 78 39998047 - GSU2956 - redox-active disulfide protein 2 2938 62.43 0 3254879..3255256 + 125 39998048 - GSU2957 - thioredoxin family protein 2939 64.77 0 3255253..3255939 + 228 39998049 - GSU2958 - thiol:disulfide interchange protein, putative 2940 63.79 0 3255969..3256628 + 219 39998050 - GSU2959 - hypothetical protein 2941 64.26 0 3256634..3257671 - 345 39998051 modC GSU2960 - molybdenum ABC transporter, ATP-binding protein modC 2942 61.26 0 3257691..3258374 - 227 39998052 modB GSU2961 - molybdenum ABC transporter, permease protein modB 2943 60.82 0 3258378..3259130 - 250 39998053 modA GSU2962 - molybdenum ABC transporter, periplasmic molybdenum-binding protein modA 2944 63.97 0 3259168..3260019 - 283 39998054 - GSU2963 - modD protein 2945 60.37 0 3260255..3261064 - 269 39998055 modE GSU2964 - molybdenum transport regulatory protein ModE 2946 62.11 0 3261189..3261737 - 182 39998056 - GSU2965 - hypothetical protein 2947 58.56 0 3261759..3261980 + 73 39998057 - GSU2966 - hypothetical protein 2948 60.16 0 3262124..3262615 + 163 39998058 - GSU2967 - hypothetical protein 2949 62.45 0 3262848..3263108 + 86 39998059 - GSU2968 - hypothetical protein 2950 60.97 0 3263301..3264248 + 315 39998060 - GSU2969 - sensory box/GGDEF family protein 2951 59.11 0 3264290..3264580 + 96 39998061 - GSU2970 - hypothetical protein 2952 61.95 0 3264683..3264979 + 98 39998062 - GSU2972 - hypothetical protein 2953 63.82 0 3264691..3264936 - 81 39998063 - GSU2971 - hypothetical protein 2954 58.70 0 3265018..3265431 - 137 39998064 - GSU2973 - putative lipoprotein 2955 66.39 +1 3265450..3267267 - 605 39998065 - GSU2974 - bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 2956 65.21 0 3267264..3268916 - 550 39998066 - GSU2975 - putative manganese-dependent inorganic pyrophosphatase 2957 61.47 0 3269006..3269602 + 198 39998067 - GSU2976 - DedA family protein 2958 60.78 0 3269687..3270331 - 214 39998068 - GSU2977 - putative translaldolase 2959 59.84 0 3270375..3270623 - 82 39998069 - GSU2978 - hypothetical protein 2960 63.01 0 3270642..3271133 - 163 39998070 folK GSU2979 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2961 60.00 0 3271194..3271613 - 139 39998071 - GSU2980 - nickel responsive regulator 2962 70.69 +1 3271715..3272584 - 289 39998072 - GSU2981 - TonB-dependent receptor, putative 2963 61.48 0 3272590..3274689 - 699 39998073 - GSU2982 - TonB dependent receptor, putative 2964 60.34 0 3275022..3275558 - 178 39998074 - GSU2983 - hypothetical protein 2965 62.76 0 3275601..3276419 - 272 39998075 - GSU2984 - ABC transporter, permease protein 2966 66.67 +1 3276434..3277186 - 250 39998076 - GSU2985 - ABC transporter, ATP-binding protein 2967 65.14 0 3277177..3278157 - 326 39998077 - GSU2986 - adhesion lipoprotein 2968 61.90 0 3278158..3278577 - 139 39998078 - GSU2987 - FUR family transcriptional regulator 2969 66.30 +1 3279233..3280603 + 456 39998079 - GSU2988 - hypothetical protein 2970 69.43 +1 3280633..3281718 - 361 39998080 - GSU2989 - L-threonine-O-3-phosphate decarboxylase, putative 2971 67.81 +1 3281715..3282677 - 320 39998081 cobD GSU2990 - cobalamin biosynthesis protein CobD 2972 63.52 0 3282674..3284707 - 677 39998082 - GSU2991 - sensor histidine kinase 2973 65.04 0 3284732..3286330 - 532 39998083 cobQ GSU2992 - cobyric acid synthase 2974 66.76 +1 3287136..3288191 - 351 39998084 - GSU2993 - cobalamin biosynthesis protein CbiG, putative 2975 69.31 +1 3288222..3289016 - 264 39998085 cobM GSU2994 - precorrin-4 C11-methyltransferase 2976 64.70 0 3289047..3289757 - 236 39998086 cobI GSU2995 - precorrin-2 C20-methyltransferase 2977 63.55 0 3289754..3290971 - 405 39998087 cobL GSU2996 - precorrin-6y c5,15-methyltransferase 2978 68.69 +1 3291016..3292104 - 362 39998088 cbiD GSU2997 - cobalamin biosynthesis protein CbiD 2979 64.09 0 3292111..3292653 - 180 39998089 - GSU2998 - nitroimidazole resistance protein, putative 2980 68.07 +1 3292653..3293294 - 213 39998090 cobH GSU2999 - precorrin-8X methylmutase 2981 65.62 0 3293294..3293677 - 127 39998091 - GSU3000 - cbiX protein 2982 65.12 0 3293679..3294518 - 279 39998092 - GSU3001 - cobalt ABC transporter, ATP-binding protein 2983 67.86 +1 3294515..3295270 - 251 39998093 - GSU3002 - cobalt ABC transporter, permease protein 2984 61.82 0 3295267..3295782 - 171 39998094 - GSU3003 - hypothetical protein 2985 66.46 +1 3295769..3296734 - 321 161579497 - GSU3004 - cobalt transport protein CbiM 2986 67.05 +1 3297117..3298424 - 435 39998096 thiC-2 GSU3005 - thiamine biosynthesis protein ThiC 2987 66.45 +1 3298421..3299815 - 464 39998097 cobB GSU3006 - cobyrinic acid a,c-diamide synthase 2988 63.76 0 3299819..3300472 - 217 39998098 - GSU3007 - phosphoglycerate mutase family protein, putative 2989 68.02 +1 3300552..3301292 - 246 39998099 cobS GSU3008 - cobalamin 5'-phosphate synthase 2990 64.59 0 3301289..3302347 - 352 39998100 cobT GSU3009 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2991 64.93 0 3302370..3302888 - 172 39998101 cobU GSU3010 - bifunctional cobalamin biosynthesis protein CobU 2992 56.25 0 3302867..3303058 - 63 39998102 - GSU3011 - hypothetical protein 2993 53.94 -1 3303119..3303283 + 54 39998103 - GSU3012 - hypothetical protein 2994 62.80 0 3303260..3303880 - 206 39998104 - GSU3013 - GTPase EngB 2995 57.43 0 3303989..3304897 + 302 39998105 - GSU3014 - HD domain-containing protein 2996 59.84 0 3305088..3305468 - 126 39998106 - GSU3015 - flagellin FlaG, putative 2997 62.65 0 3305627..3311104 - 1825 39998107 - GSU3016 - hypothetical protein 2998 55.38 0 3311632..3311826 + 64 39998108 - GSU3017 - hypothetical protein 2999 42.16 -2 3311879..3312637 + 252 39998109 - GSU3018 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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