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Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2779 65.79 0 3075175..3076197 - 340 39997889 etfA GSU2796 - electron transfer flavoprotein, alpha subunit 2780 64.96 0 3076562..3077380 - 272 39997890 etfB GSU2797 - electron transfer flavoprotein, beta subunit 2781 70.90 +1 3077578..3078381 - 267 39997891 - GSU2798 - acetyltransferase 2782 64.60 0 3078386..3079258 - 290 39997892 - GSU2799 - radical SAM domain-containing protein 2783 64.19 0 3079699..3080628 + 309 39997893 draG GSU2800 - dinitrogenase reductase activating glycohydrolase 2784 63.26 0 3080715..3082181 + 488 39997894 - GSU2801 - cytochrome c family protein 2785 60.78 0 3082277..3083074 - 265 39997895 dRAT GSU2802 - NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 2786 63.94 0 3083133..3083462 - 109 39997896 - GSU2803 - dinitrogenase iron-molybdenum cofactor family protein 2787 56.06 0 3083491..3083754 - 87 39997897 - GSU2804 - ferredoxin family protein 2788 62.82 0 3083822..3084211 - 129 39997898 nifX GSU2805 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifX 2789 64.46 0 3084293..3087052 - 919 39997899 nifEN GSU2806 - nitrogenase molybdenum-iron cofactor biosynthesis protein NifEN 2790 61.16 0 3087268..3087957 - 229 39997900 - GSU2807 - hypothetical protein 2791 58.95 0 3088058..3088627 + 189 39997901 - GSU2808 - cytochrome c family protein 2792 56.64 0 3088861..3089319 + 152 39997902 - GSU2809 - FUR family transcriptional regulator 2793 60.98 0 3089483..3089605 + 40 39997903 - GSU2810 - hypothetical protein 2794 59.97 0 3089715..3091118 + 467 39997904 hsc GSU2811 - cytochrome c Hsc 2795 60.45 0 3091152..3091553 + 133 39997905 - GSU2812 - glutaredoxin family protein 2796 61.66 0 3091634..3092671 + 345 39997906 ccpA-2 GSU2813 - cytochrome c551 peroxidase 2797 61.61 0 3092806..3093378 + 190 39997907 - GSU2814 - rubrerythrin 2798 60.93 0 3093614..3095863 + 749 39997908 - GSU2815 - sensory box histidine kinase 2799 57.23 0 3095966..3098614 - 882 39997909 - GSU2816 - sensory box histidine kinase/response regulator 2800 54.99 -1 3098717..3099607 - 296 39997910 - GSU2817 - LysR family transcriptional regulator 2801 58.62 0 3099680..3100648 + 322 39997911 - GSU2818 - hypothetical protein 2802 61.56 0 3100763..3102232 - 489 39997912 nifK GSU2819 - nitrogenase molybdenum-iron protein, beta subunit 2803 60.90 0 3102400..3103839 - 479 39997913 nifD GSU2820 - nitrogenase molybdenum-iron protein, alpha chain 2804 60.80 0 3104018..3104887 - 289 39997914 nifH GSU2821 - nitrogenase iron protein 2805 58.51 0 3105261..3105836 - 191 39997915 - GSU2822 - response regulator 2806 66.26 +1 3105998..3106987 + 329 39997916 - GSU2823 - HlyD family secretion protein 2807 64.46 0 3108907..3110040 + 377 39997917 - GSU2825 - hypothetical protein 2808 56.94 0 3110043..3111173 + 376 39997918 - GSU2826 - hypothetical protein 2809 55.56 0 3111249..3111590 - 113 39997919 - GSU2827 - hypothetical protein 2810 61.44 0 3111708..3112568 - 286 39997920 - GSU2828 - GGDEF domain-containing protein 2811 59.02 0 3112696..3114081 - 461 39997921 - GSU2829 - deoxyribodipyrimidine photolyase, putative 2812 56.25 0 3114556..3115083 - 175 39997922 rplQ GSU2830 - 50S ribosomal protein L17 2813 52.39 -1 3115118..3116140 - 340 39997923 rpoA GSU2831 - DNA-directed RNA polymerase subunit alpha 2814 53.43 -1 3116173..3116799 - 208 39997924 rpsD GSU2832 - 30S ribosomal protein S4 2815 56.82 0 3116837..3117232 - 131 39997925 rpsK GSU2833 - 30S ribosomal protein S11 2816 57.18 0 3117254..3117622 - 122 39997926 rpsM GSU2834 - 30S ribosomal protein S13 2817 53.41 -1 3117790..3118536 - 248 39997927 map GSU2835 - methionine aminopeptidase, type I 2818 54.59 -1 3118533..3119186 - 217 39997928 adk GSU2836 - adenylate kinase 2819 52.60 -1 3119208..3120515 - 435 39997929 secY GSU2837 - preprotein translocase subunit SecY 2820 54.81 -1 3120512..3120958 - 148 39997930 rplO GSU2838 - 50S ribosomal protein L15 2821 52.22 -1 3120978..3121157 - 59 39997931 rpmD GSU2839 - 50S ribosomal protein L30 2822 55.01 -1 3121179..3121667 - 162 39997932 rpsE GSU2840 - 30S ribosomal protein S5 2823 53.91 -1 3121690..3122034 - 114 39997933 rplR GSU2841 - 50S ribosomal protein L18 2824 53.89 -1 3122077..3122616 - 179 39997934 rplF GSU2842 - 50S ribosomal protein L6 2825 53.38 -1 3122645..3123043 - 132 39997935 rpsH GSU2843 - 30S ribosomal protein S8 2826 52.69 -1 3123080..3123265 - 61 39997936 rpsN GSU2844 - 30S ribosomal protein S14 2827 50.56 -1 3123285..3123824 - 179 39997937 rplE GSU2845 - 50S ribosomal protein L5 2828 51.99 -1 3123839..3124165 - 108 39997938 rplX GSU2846 - 50S ribosomal protein L24 2829 51.49 -1 3124189..3124557 - 122 39997939 rplN GSU2847 - 50S ribosomal protein L14 2830 46.90 -2 3124571..3124828 - 85 39997940 rpsQ GSU2848 - 30S ribosomal protein S17 2831 46.15 -2 3124841..3125035 - 64 39997941 rpmC GSU2849 - 50S ribosomal protein L29 2832 55.08 -1 3125019..3125441 - 140 39997942 rplP GSU2850 - 50S ribosomal protein L16 2833 52.67 -1 3125460..3126095 - 211 39997943 rpsC GSU2851 - 30S ribosomal protein S3 2834 55.36 0 3126113..3126448 - 111 39997944 rplV GSU2852 - 50S ribosomal protein L22 2835 49.29 -2 3126471..3126752 - 93 39997945 rpsS GSU2853 - 30S ribosomal protein S19 2836 53.70 -1 3126780..3127604 - 274 39997946 rplB GSU2854 - 50S ribosomal protein L2 2837 50.18 -1 3127629..3127913 - 94 39997947 rplW GSU2855 - 50S ribosomal protein L23 2838 50.48 -1 3127910..3128533 - 207 39997948 rplD GSU2856 - 50S ribosomal protein L4 2839 55.13 -1 3128558..3129190 - 210 39997949 rplC GSU2857 - 50S ribosomal protein L3 2840 53.40 -1 3129218..3129526 - 102 39997950 rpsJ GSU2858 - 30S ribosomal protein S10 2841 60.54 0 3129545..3130735 - 396 39997951 tuf-1 GSU2859 - elongation factor Tu 2842 54.59 -1 3130763..3132841 - 692 39997952 fusA-3 GSU2860 - elongation factor G 2843 54.35 -1 3132883..3133353 - 156 39997953 rpsG GSU2861 - 30S ribosomal protein S7 2844 58.86 0 3138159..3142271 - 1370 39997954 rpoB GSU2863 - DNA-directed RNA polymerase subunit beta 2845 58.59 0 3142434..3142817 - 127 39997955 rplL GSU2864 - 50S ribosomal protein L7/L12 2846 57.90 0 3142865..3143389 - 174 39997956 rplJ GSU2865 - 50S ribosomal protein L10 2847 60.71 0 3143569..3144273 - 234 39997957 rplA GSU2866 - 50S ribosomal protein L1 2848 56.10 0 3144291..3144716 - 141 39997958 rplK GSU2867 - 50S ribosomal protein L11 2849 54.73 -1 3144778..3145305 - 175 39997959 nusG GSU2868 - transcription antitermination protein NusG 2850 54.23 -1 3145321..3145521 - 66 39997960 secE GSU2869 - preprotein translocase subunit SecE 2851 50.67 -1 3145659..3145808 - 49 39997961 rpmG GSU2870 - 50S ribosomal protein L33 2852 60.71 0 3145862..3147052 - 396 39997962 tuf-2 GSU2871 - elongation factor Tu 2853 61.87 0 3147726..3148538 - 270 39997963 - GSU2872 - electron transfer flavoprotein 2854 66.94 +1 3148608..3150425 - 605 39997964 - GSU2873 - radical SAM domain-containing protein 2855 63.21 0 3150441..3151481 - 346 39997965 argC GSU2874 - N-acetyl-gamma-glutamyl-phosphate reductase 2856 60.81 0 3151592..3151984 - 130 39997966 rpsI GSU2875 - 30S ribosomal protein S9 2857 56.48 0 3152018..3152449 - 143 39997967 rplM GSU2876 - 50S ribosomal protein L13 2858 66.12 +1 3152554..3153288 - 244 39997968 truA GSU2877 - tRNA pseudouridine synthase A 2859 63.59 0 3153358..3154461 - 367 39997969 - GSU2878 - aspartate-semialdehyde dehydrogenase 2860 64.55 0 3154503..3155591 - 362 39997970 leuB GSU2879 - 3-isopropylmalate dehydrogenase 2861 60.91 0 3155698..3156531 - 277 39997971 - GSU2880 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 2862 64.90 0 3156513..3157814 + 433 39997972 - GSU2881 - hypothetical protein 2863 67.10 +1 3157976..3160042 - 688 39997973 - GSU2882 - cytochrome c family protein 2864 67.33 +1 3160224..3162932 - 902 39997974 - GSU2883 - cytochrome c family protein 2865 67.47 +1 3163008..3166124 - 1038 39997975 - GSU2884 - cytochrome c family protein 2866 65.84 0 3166135..3168801 - 888 39997976 - GSU2885 - NHL repeat-containing protein 2867 64.07 0 3169273..3170544 + 423 39997977 - GSU2886 - TonB-dependent receptor, putative 2868 65.01 0 3170511..3173165 - 884 39997978 - GSU2887 - cytochrome c family protein 2869 61.90 0 3173653..3175164 - 503 39997979 - GSU2888 - B12 binding /radical SAM domain-containing protein 2870 59.89 0 3175424..3175777 - 117 39997980 - GSU2889 - hypothetical protein 2871 60.51 0 3175814..3176641 - 275 39997981 - GSU2890 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 2872 65.49 0 3176689..3177966 - 425 39997982 - GSU2891 - hypothetical protein 2873 70.18 +1 3178124..3178294 - 56 39997983 - GSU2892 - hypothetical protein 2874 63.55 0 3178281..3179501 - 406 39997984 - GSU2893 - hypothetical protein 2875 62.20 0 3180104..3180841 + 245 39997985 - GSU2894 - hypothetical protein 2876 64.98 0 3180870..3181403 - 177 39997986 - GSU2895 - hypothetical protein 2877 63.78 0 3181453..3182493 - 346 39997987 - GSU2896 - ankyrin-related protein 2878 58.33 0 3182630..3182725 - 31 39997988 - GSU2897 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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