version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2552 64.61 0 2827974..2829725 + 583 39997662 - GSU2567 - sensor histidine kinase 2553 67.97 +1 2829875..2831179 - 434 39997663 - GSU2568 - MiaB-like tRNA modifying enzyme 2554 68.55 +1 2831179..2832240 - 353 39997664 trmU GSU2569 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2555 68.02 +1 2832260..2833444 - 394 39997665 - GSU2570 - cysteine desulfurase 2556 67.35 +1 2833441..2833878 - 145 39997666 - GSU2571 - Rrf2 family protein 2557 64.60 0 2833882..2834559 - 225 39997667 cysE GSU2572 - serine acetyltransferase 2558 72.60 +2 2834710..2835063 - 117 39997668 - GSU2573 - hypothetical protein 2559 63.23 0 2835091..2836197 - 368 39997669 - GSU2574 - response regulator 2560 66.90 +1 2836201..2838753 - 850 39997670 - GSU2575 - sensor histidine kinase/response regulator 2561 62.73 0 2838754..2839617 - 287 39997671 - GSU2576 - HD domain-containing protein 2562 66.00 0 2839604..2839903 - 99 39997672 - GSU2577 - hypothetical protein 2563 64.30 0 2840026..2840406 - 126 39997673 cheW-9 GSU2578 - purine-binding chemotaxis protein CheW 2564 65.93 0 2840564..2842195 - 543 39997674 - GSU2579 - methyl-accepting chemotaxis protein 2565 60.44 0 2842215..2842487 - 90 39997675 - GSU2580 - hypothetical protein 2566 67.40 +1 2842690..2844060 - 456 39997676 - GSU2581 - sigma-54 dependent transcriptional regulator 2567 60.38 0 2844240..2845544 + 434 39997677 - GSU2582 - hypothetical protein 2568 61.45 0 2846014..2846646 - 210 39997678 - GSU2583 - isochorismatase family protein 2569 69.01 +1 2846785..2848278 - 497 39997679 - GSU2584 - putative lipoprotein 2570 66.67 +1 2848269..2848505 - 78 39997680 - GSU2585 - hypothetical protein 2571 58.83 0 2848699..2850447 - 582 39997681 - GSU2586 - hypothetical protein 2572 55.71 0 2850867..2851295 + 142 39997682 - GSU2587 - MarR family transcriptional regulator 2573 56.95 0 2851313..2852671 + 452 39997683 lpdA-2 GSU2588 - alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase 2574 53.54 -1 2852695..2852793 + 32 39997684 - GSU2589 - hypothetical protein 2575 40.29 -2 2854449..2855555 - 368 39997685 - GSU2590 - hypothetical protein 2576 54.02 -1 2855722..2856504 + 260 39997686 - GSU2591 - ISGsu5, transposase 2577 42.26 -2 2857020..2858330 - 436 39997687 - GSU2592 - hypothetical protein 2578 58.77 0 2858365..2859390 + 341 39997688 - GSU2593 - ISGsu6, transposase OrfA 2579 58.24 0 2859387..2860181 + 264 39997689 - GSU2594 - transposase/IS protein 2580 48.25 -2 2861237..2861350 + 37 39997690 - GSU2595 - hypothetical protein 2581 45.63 -2 2862308..2862982 - 224 39997691 - GSU2596 - putative lipoprotein 2582 55.34 0 2863246..2864331 - 361 39997692 - GSU2597 - ISGsu2, transposase 2583 48.48 -2 2865007..2865105 + 32 39997693 - GSU2598 - hypothetical protein 2584 51.77 -1 2865265..2866311 - 348 39997694 - GSU2599 - ISGsu4, transposase 2585 69.06 +1 2867897..2869654 - 585 39997695 - GSU2601 - TPR domain/SecC motif-containing domain protein 2586 58.76 0 2869900..2870190 - 96 39997696 huP-1 GSU2602 - DNA-binding protein HU 2587 63.94 0 2870277..2872001 - 574 39997697 rpsA GSU2603 - 30S ribosomal protein S1 2588 62.54 0 2872104..2872952 - 282 39997698 lytB GSU2604 - penicillin tolerance protein LytB 2589 69.23 +1 2872990..2873691 - 233 39997699 cmk GSU2605 - cytidylate kinase 2590 69.77 +1 2873688..2874977 - 429 39997700 aroA GSU2606 - 3-phosphoshikimate 1-carboxyvinyltransferase 2591 68.84 +1 2874994..2875866 - 290 39997701 - GSU2607 - prephenate dehydrogenase 2592 63.23 0 2875863..2876939 - 358 39997702 pheA GSU2608 - chorismate mutase/prephenate dehydratase 2593 63.73 0 2877043..2878980 - 645 39997703 - GSU2609 - type IV pilus assembly protein, putative 2594 65.24 0 2879012..2880550 - 512 39997704 - GSU2610 - LysM domain-containing protein 2595 67.25 +1 2880625..2882007 - 460 39997705 - GSU2611 - hypothetical protein 2596 63.31 0 2882323..2882829 - 168 39997706 - GSU2612 - rubrerythrin/rubredoxin protein, putative 2597 61.62 0 2882887..2883777 - 296 39997707 - GSU2613 - cation efflux family protein 2598 67.99 +1 2883767..2885503 - 578 39997708 recJ GSU2614 - single-stranded-DNA-specific exonuclease RecJ 2599 60.58 0 2885565..2886155 - 196 39997709 - GSU2615 - TPR domain-containing protein 2600 58.53 0 2886169..2887077 - 302 39997710 secF GSU2616 - preprotein translocase subunit SecF 2601 62.23 0 2887086..2888687 - 533 39997711 secD GSU2617 - preprotein translocase subunit SecD 2602 62.31 0 2888713..2889033 - 106 39997712 - GSU2618 - preprotein translocase, YajC subunit 2603 64.71 0 2889104..2890225 - 373 39997713 tgt-2 GSU2619 - queuine tRNA-ribosyltransferase 2604 67.93 +1 2890299..2891330 - 343 39997714 queA GSU2620 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2605 64.29 0 2891317..2892282 - 321 39997715 - GSU2621 - stage II sporulation-related protein 2606 59.79 0 2892888..2895026 + 712 39997716 - GSU2622 - HAMP domain/GAF domain/HD domain-containing protein 2607 66.46 +1 2895130..2896092 + 320 39997717 - GSU2623 - peptide ABC transporter, ATP-binding protein 2608 62.25 0 2896089..2897084 + 331 39997718 - GSU2624 - peptide ABC transporter, ATP-binding protein 2609 55.56 0 2897198..2897476 + 92 39997719 - GSU2625 - ArsR family transcriptional regulator 2610 64.32 0 2897545..2898735 + 396 39997720 - GSU2626 - hypothetical protein 2611 67.79 +1 2898797..2899600 - 267 39997721 - GSU2627 - biotin synthesis protein, putative 2612 66.06 0 2899593..2900414 - 273 39997722 - GSU2628 - non-heme peroxidase, putative 2613 68.54 +1 2900426..2901601 - 391 39997723 bioF GSU2629 - 8-amino-7-oxononanoate synthase 2614 65.64 0 2901768..2902451 + 227 39997724 - GSU2630 - serine/threonine protein phosphatase, putative 2615 59.47 0 2902448..2902864 + 138 39997725 - GSU2631 - hypothetical protein 2616 65.37 0 2902943..2904178 + 411 39997726 - GSU2632 - GGDEF domain-containing protein 2617 62.46 0 2904304..2904921 + 205 39997727 - GSU2633 - putative lipoprotein 2618 58.63 0 2905012..2905347 - 111 39997728 - GSU2634 - hypothetical protein 2619 56.19 0 2905385..2905804 - 139 39997729 - GSU2635 - hypothetical protein 2620 64.67 0 2905877..2907730 - 617 39997730 - GSU2636 - alpha-amylase family protein 2621 61.70 0 2907815..2908801 - 328 39997731 - GSU2637 - alcohol dehydrogenase, zinc-containing 2622 67.50 +1 2908915..2909394 - 159 39997732 - GSU2638 - hypothetical protein 2623 67.57 +1 2909401..2911500 - 699 39997733 - GSU2639 - hypothetical protein 2624 61.52 0 2911658..2912356 - 232 39997734 - GSU2640 - hypothetical protein 2625 59.18 0 2912401..2913135 - 244 39997735 - GSU2641 - hypothetical protein 2626 62.46 0 2913384..2914073 - 229 39997736 - GSU2642 - cytochrome c family protein 2627 60.42 0 2914105..2914536 - 143 39997737 - GSU2643 - cytochrome c family protein 2628 61.69 0 2914617..2915861 - 414 39997738 - GSU2644 - hypothetical protein 2629 62.44 0 2915960..2916835 - 291 39997739 - GSU2645 - cytochrome c family protein 2630 57.96 0 2917145..2917477 + 110 39997740 - GSU2646 - hypothetical protein 2631 65.86 0 2917553..2918422 - 289 39997741 - GSU2647 - hypothetical protein 2632 57.28 0 2918536..2919057 - 173 39997742 - GSU2648 - hypothetical protein 2633 60.86 0 2919433..2920242 + 269 39997743 - GSU2649 - amino acid ABC transporter, amino acid-binding protein 2634 63.88 0 2920249..2921037 + 262 39997744 - GSU2650 - amino acid ABC transporter, permease protein, putative 2635 66.53 +1 2921027..2921758 + 243 39997745 - GSU2651 - amino acid ABC transporter, ATP-binding protein 2636 60.90 0 2921970..2923148 + 392 39997746 - GSU2652 - methyl-accepting chemotaxis protein 2637 67.29 +1 2923302..2924756 + 484 39997747 - GSU2653 - MATE efflux family protein 2638 68.46 +1 2924871..2925929 + 352 39997748 pdhA GSU2654 - pyruvate dehydrogenase complex E1 component, alpha subunit 2639 69.57 +1 2925945..2926907 + 320 39997749 pdhB GSU2655 - pyruvate dehydrogenase complex E1 component, beta subunit 2640 66.16 +1 2927243..2928421 + 392 39997750 aceF GSU2656 - branched-chain alpha-keto acid dehydrogenase subunit E2 2641 61.51 0 2928502..2931024 - 840 39997751 - GSU2657 - spore coat protein A 2642 52.81 -1 2931002..2931232 + 76 39997752 - GSU2658 - putative lipoprotein 2643 53.15 -1 2931410..2931631 + 73 39997753 - GSU2659 - hypothetical protein 2644 62.28 0 2931669..2932124 + 151 39997754 - GSU2660 - hypothetical protein 2645 63.49 0 2932127..2932693 + 188 39997755 - GSU2661 - hypothetical protein 2646 64.83 0 2932790..2934262 - 490 39997756 - GSU2662 - hypothetical protein 2647 58.79 0 2934433..2934597 - 54 39997757 - GSU2663 - putative lipoprotein 2648 64.33 0 2934692..2939182 - 1496 39997758 - GSU2664 - outer membrane efflux protein 2649 65.37 0 2939179..2940339 - 386 39997759 - GSU2665 - RND family efflux transporter MFP subunit 2650 61.84 0 2940336..2940977 - 213 39997760 - GSU2666 - TetR family transcriptional regulator 2651 62.32 0 2941214..2942710 + 498 39997761 - GSU2667 - sensory box histidine kinase 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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