version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2515 70.29 +1 2790261..2791337 - 358 39997625 - GSU2530 - GTPase YjeQ 2516 63.28 0 2791476..2794637 - 1053 39997626 - GSU2531 - sensory box histidine kinase 2517 61.11 0 2794634..2795065 - 143 39997627 - GSU2532 - hypothetical protein 2518 63.70 0 2795087..2796298 - 403 39997628 - GSU2533 - hypothetical protein 2519 64.83 0 2796313..2797671 - 452 39997629 - GSU2534 - sensory box/response regulator 2520 61.26 0 2797751..2798194 - 147 39997630 - GSU2535 - response regulator 2521 65.31 0 2798512..2799324 - 270 39997631 - GSU2536 - dienelactone hydrolase family protein 2522 59.38 0 2799433..2801340 - 635 39997632 speA GSU2537 - arginine decarboxylase 2523 62.84 0 2801539..2802741 - 400 39997633 nspC GSU2538 - carboxynorspermidine decarboxylase 2524 62.74 0 2802886..2804082 - 398 39997634 LYS1 GSU2539 - saccharopine dehydrogenase 2525 60.62 0 2804108..2804653 - 181 39997635 - GSU2540 - Cro/CI family transcriptional regulator 2526 68.51 +1 2804942..2805754 + 270 39997636 proC GSU2541 - pyrroline-5-carboxylate reductase 2527 59.26 0 2805847..2806035 - 62 39997637 - GSU2542 - hypothetical protein 2528 61.52 0 2806022..2806798 - 258 39997638 - GSU2543 - polysaccharide deacetylase domain-containing protein 2529 65.37 0 2806908..2807603 - 231 39997639 - GSU2544 - hypothetical protein 2530 65.45 0 2807613..2808188 - 191 39997640 maf GSU2545 - maf protein 2531 54.61 -1 2808175..2808456 - 93 39997641 - GSU2546 - hypothetical protein 2532 66.51 +1 2808536..2809840 - 434 39997642 gid GSU2547 - tRNA (uracil-5-)-methyltransferase Gid 2533 64.22 0 2809837..2810244 - 135 39997643 - GSU2548 - hypothetical protein 2534 62.53 0 2810320..2812593 - 757 39997644 topA GSU2549 - DNA topoisomerase I 2535 68.16 +1 2812608..2813678 - 356 39997645 drpA GSU2550 - DNA processing protein DprA 2536 63.89 0 2813764..2814771 - 335 39997646 - GSU2551 - LysM domain-containing protein 2537 66.39 +1 2814839..2815567 - 242 39997647 - GSU2552 - putative lipoprotein 2538 62.04 0 2815761..2816474 + 237 39997648 - GSU2553 - glycosyl transferase, group 2 family protein 2539 54.76 -1 2816467..2816760 + 97 39997649 - GSU2554 - hypothetical protein 2540 64.44 0 2816750..2818363 + 537 39997650 - GSU2555 - melittin resistance protein, putative 2541 67.16 +1 2818455..2819669 + 404 39997651 - GSU2556 - U32 family peptidase 2542 69.34 +1 2819677..2820612 + 311 39997652 - GSU2557 - polysaccharide deacetylase family protein 2543 62.25 0 2820654..2821469 + 271 39997653 - GSU2558 - hypothetical protein 2544 65.95 0 2821751..2823292 - 513 39997654 - GSU2559 - exopolyphosphatase, putative 2545 67.90 +1 2823289..2824179 - 296 39997655 - GSU2560 - hypothetical protein 2546 65.71 0 2824228..2824752 - 174 39997656 - GSU2561 - hypothetical protein 2547 71.40 +1 2824780..2825265 - 161 39997657 sixA GSU2562 - phosphohistidine phosphatase SixA 2548 57.50 0 2825411..2825770 + 119 39997658 - GSU2563 - hypothetical protein 2549 65.41 0 2825830..2827107 + 425 39997659 - GSU2564 - hypothetical protein 2550 62.76 0 2827104..2827871 + 255 39997660 - GSU2565 - sensor histidine kinase 2551 53.15 -1 2827850..2827960 - 36 39997661 - GSU2566 - hypothetical protein 2552 64.61 0 2827974..2829725 + 583 39997662 - GSU2567 - sensor histidine kinase 2553 67.97 +1 2829875..2831179 - 434 39997663 - GSU2568 - MiaB-like tRNA modifying enzyme 2554 68.55 +1 2831179..2832240 - 353 39997664 trmU GSU2569 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2555 68.02 +1 2832260..2833444 - 394 39997665 - GSU2570 - cysteine desulfurase 2556 67.35 +1 2833441..2833878 - 145 39997666 - GSU2571 - Rrf2 family protein 2557 64.60 0 2833882..2834559 - 225 39997667 cysE GSU2572 - serine acetyltransferase 2558 72.60 +2 2834710..2835063 - 117 39997668 - GSU2573 - hypothetical protein 2559 63.23 0 2835091..2836197 - 368 39997669 - GSU2574 - response regulator 2560 66.90 +1 2836201..2838753 - 850 39997670 - GSU2575 - sensor histidine kinase/response regulator 2561 62.73 0 2838754..2839617 - 287 39997671 - GSU2576 - HD domain-containing protein 2562 66.00 0 2839604..2839903 - 99 39997672 - GSU2577 - hypothetical protein 2563 64.30 0 2840026..2840406 - 126 39997673 cheW-9 GSU2578 - purine-binding chemotaxis protein CheW 2564 65.93 0 2840564..2842195 - 543 39997674 - GSU2579 - methyl-accepting chemotaxis protein 2565 60.44 0 2842215..2842487 - 90 39997675 - GSU2580 - hypothetical protein 2566 67.40 +1 2842690..2844060 - 456 39997676 - GSU2581 - sigma-54 dependent transcriptional regulator 2567 60.38 0 2844240..2845544 + 434 39997677 - GSU2582 - hypothetical protein 2568 61.45 0 2846014..2846646 - 210 39997678 - GSU2583 - isochorismatase family protein 2569 69.01 +1 2846785..2848278 - 497 39997679 - GSU2584 - putative lipoprotein 2570 66.67 +1 2848269..2848505 - 78 39997680 - GSU2585 - hypothetical protein 2571 58.83 0 2848699..2850447 - 582 39997681 - GSU2586 - hypothetical protein 2572 55.71 0 2850867..2851295 + 142 39997682 - GSU2587 - MarR family transcriptional regulator 2573 56.95 0 2851313..2852671 + 452 39997683 lpdA-2 GSU2588 - alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase 2574 53.54 -1 2852695..2852793 + 32 39997684 - GSU2589 - hypothetical protein 2575 40.29 -2 2854449..2855555 - 368 39997685 - GSU2590 - hypothetical protein 2576 54.02 -1 2855722..2856504 + 260 39997686 - GSU2591 - ISGsu5, transposase 2577 42.26 -2 2857020..2858330 - 436 39997687 - GSU2592 - hypothetical protein 2578 58.77 0 2858365..2859390 + 341 39997688 - GSU2593 - ISGsu6, transposase OrfA 2579 58.24 0 2859387..2860181 + 264 39997689 - GSU2594 - transposase/IS protein 2580 48.25 -2 2861237..2861350 + 37 39997690 - GSU2595 - hypothetical protein 2581 45.63 -2 2862308..2862982 - 224 39997691 - GSU2596 - putative lipoprotein 2582 55.34 0 2863246..2864331 - 361 39997692 - GSU2597 - ISGsu2, transposase 2583 48.48 -2 2865007..2865105 + 32 39997693 - GSU2598 - hypothetical protein 2584 51.77 -1 2865265..2866311 - 348 39997694 - GSU2599 - ISGsu4, transposase 2585 69.06 +1 2867897..2869654 - 585 39997695 - GSU2601 - TPR domain/SecC motif-containing domain protein 2586 58.76 0 2869900..2870190 - 96 39997696 huP-1 GSU2602 - DNA-binding protein HU 2587 63.94 0 2870277..2872001 - 574 39997697 rpsA GSU2603 - 30S ribosomal protein S1 2588 62.54 0 2872104..2872952 - 282 39997698 lytB GSU2604 - penicillin tolerance protein LytB 2589 69.23 +1 2872990..2873691 - 233 39997699 cmk GSU2605 - cytidylate kinase 2590 69.77 +1 2873688..2874977 - 429 39997700 aroA GSU2606 - 3-phosphoshikimate 1-carboxyvinyltransferase 2591 68.84 +1 2874994..2875866 - 290 39997701 - GSU2607 - prephenate dehydrogenase 2592 63.23 0 2875863..2876939 - 358 39997702 pheA GSU2608 - chorismate mutase/prephenate dehydratase 2593 63.73 0 2877043..2878980 - 645 39997703 - GSU2609 - type IV pilus assembly protein, putative 2594 65.24 0 2879012..2880550 - 512 39997704 - GSU2610 - LysM domain-containing protein 2595 67.25 +1 2880625..2882007 - 460 39997705 - GSU2611 - hypothetical protein 2596 63.31 0 2882323..2882829 - 168 39997706 - GSU2612 - rubrerythrin/rubredoxin protein, putative 2597 61.62 0 2882887..2883777 - 296 39997707 - GSU2613 - cation efflux family protein 2598 67.99 +1 2883767..2885503 - 578 39997708 recJ GSU2614 - single-stranded-DNA-specific exonuclease RecJ 2599 60.58 0 2885565..2886155 - 196 39997709 - GSU2615 - TPR domain-containing protein 2600 58.53 0 2886169..2887077 - 302 39997710 secF GSU2616 - preprotein translocase subunit SecF 2601 62.23 0 2887086..2888687 - 533 39997711 secD GSU2617 - preprotein translocase subunit SecD 2602 62.31 0 2888713..2889033 - 106 39997712 - GSU2618 - preprotein translocase, YajC subunit 2603 64.71 0 2889104..2890225 - 373 39997713 tgt-2 GSU2619 - queuine tRNA-ribosyltransferase 2604 67.93 +1 2890299..2891330 - 343 39997714 queA GSU2620 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2605 64.29 0 2891317..2892282 - 321 39997715 - GSU2621 - stage II sporulation-related protein 2606 59.79 0 2892888..2895026 + 712 39997716 - GSU2622 - HAMP domain/GAF domain/HD domain-containing protein 2607 66.46 +1 2895130..2896092 + 320 39997717 - GSU2623 - peptide ABC transporter, ATP-binding protein 2608 62.25 0 2896089..2897084 + 331 39997718 - GSU2624 - peptide ABC transporter, ATP-binding protein 2609 55.56 0 2897198..2897476 + 92 39997719 - GSU2625 - ArsR family transcriptional regulator 2610 64.32 0 2897545..2898735 + 396 39997720 - GSU2626 - hypothetical protein 2611 67.79 +1 2898797..2899600 - 267 39997721 - GSU2627 - biotin synthesis protein, putative 2612 66.06 0 2899593..2900414 - 273 39997722 - GSU2628 - non-heme peroxidase, putative 2613 68.54 +1 2900426..2901601 - 391 39997723 bioF GSU2629 - 8-amino-7-oxononanoate synthase 2614 65.64 0 2901768..2902451 + 227 39997724 - GSU2630 - serine/threonine protein phosphatase, putative 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0