version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2465 63.01 0 2720267..2722045 + 592 39997575 kdpA GSU2480 - potassium-transporting ATPase subunit A 2466 62.75 0 2722110..2724179 + 689 39997576 kdpB GSU2481 - potassium-transporting ATPase, B subunit 2467 63.16 0 2724225..2724794 + 189 39997577 kdpC GSU2482 - potassium-transporting ATPase, C subunit 2468 68.21 +1 2724833..2727490 + 885 39997578 kdpD GSU2483 - sensor histidine kinase KdpD 2469 68.23 +1 2727480..2728184 + 234 39997579 kdpE GSU2484 - DNA-binding response regulator KdpE 2470 62.54 0 2728476..2730293 + 605 39997580 - GSU2485 - potassium transporter family protein 2471 69.77 +1 2730317..2731636 - 439 39997581 - GSU2486 - hypothetical protein 2472 70.69 +1 2731633..2732577 - 314 39997582 arcC GSU2487 - carbamate kinase 2473 69.41 +1 2732754..2733845 + 363 39997583 - GSU2488 - hypothetical protein 2474 67.24 +1 2733951..2735339 + 462 39997584 - GSU2489 - TatD family deoxyribonuclease 2475 66.23 +1 2735710..2737077 + 455 39997585 - GSU2490 - oxalate/formate antiporter, putative 2476 67.06 +1 2737208..2738470 + 420 39997586 - GSU2491 - major facilitator family transporter 2477 67.55 +1 2738467..2740959 + 830 39997587 - GSU2492 - sensory box histidine kinase 2478 63.98 0 2741307..2742089 - 260 39997588 - GSU2493 - NHL repeat-containing protein 2479 62.38 0 2742194..2743498 - 434 39997589 - GSU2494 - cytochrome c family protein 2480 63.88 0 2743510..2745450 - 646 39997590 - GSU2495 - cytochrome c family protein 2481 59.38 0 2745508..2747223 - 571 39997591 - GSU2496 - hypothetical protein 2482 65.48 0 2747313..2748491 - 392 39997592 - GSU2497 - putative lipoprotein 2483 64.83 0 2748463..2749062 - 199 39997593 - GSU2498 - putative lipoprotein 2484 63.04 0 2749085..2751262 - 725 39997594 - GSU2499 - hypothetical protein 2485 67.30 +1 2751407..2752828 + 473 39997595 - GSU2500 - hypothetical protein 2486 68.95 +1 2752753..2754066 - 437 39997596 - GSU2501 - cytochrome c family protein 2487 66.99 +1 2754063..2757116 - 1017 39997597 - GSU2502 - spermine/spermidine synthase family protein 2488 65.66 0 2757253..2758545 - 430 39997598 - GSU2503 - cytochrome c family protein 2489 62.82 0 2758656..2759954 - 432 39997599 - GSU2504 - cytochrome c family protein 2490 60.97 0 2760200..2761147 - 315 39997600 - GSU2505 - NHL repeat-containing protein 2491 62.54 0 2762042..2763736 - 564 39997601 - GSU2506 - sensory box protein/sigma-54 dependent DNA-binding response regulator 2492 62.11 0 2763705..2765612 - 635 39997602 - GSU2507 - sensor histidine kinase 2493 68.57 +1 2765786..2767465 + 559 39997603 - GSU2508 - TPR domain-containing protein 2494 64.18 0 2767575..2768339 + 254 39997604 - GSU2509 - glycosyl transferase, group 2 family protein 2495 72.49 +2 2768336..2769262 + 308 39997605 - GSU2510 - hypothetical protein 2496 63.81 0 2769311..2771932 - 873 39997606 - GSU2511 - sensory box/GGDEF family protein 2497 66.67 +1 2772045..2772383 - 112 39997607 - GSU2512 - hypothetical protein 2498 65.99 0 2772615..2773055 + 146 39997608 - GSU2513 - cytochrome c family protein 2499 65.66 0 2773469..2773567 - 32 39997609 - GSU2514 - hypothetical protein 2500 61.97 0 2773615..2774040 + 141 39997610 - GSU2515 - cytochrome c family protein, putative 2501 61.56 0 2774345..2775088 - 247 39997611 - GSU2516 - rhodanese-like domain-containing protein 2502 68.92 +1 2775205..2777202 - 665 39997612 - GSU2517 - rhodanese-like domain/cysteine-rich domain-containing protein 2503 58.87 0 2777199..2777621 - 140 39997613 - GSU2518 - hypothetical protein 2504 62.89 0 2777649..2778812 - 387 39997614 - GSU2519 - (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative 2505 67.98 +1 2778846..2779607 - 253 39997615 - GSU2520 - (R)-2-hydroxyglutaryl-CoA dehydratase activator 2506 65.99 0 2779657..2780244 - 195 39997616 - GSU2521 - hypothetical protein 2507 60.61 0 2780416..2780778 - 120 39997617 - GSU2522 - hypothetical protein 2508 68.67 +1 2780905..2781801 + 298 39997618 - GSU2523 - LysR family transcriptional regulator 2509 63.73 0 2781835..2783229 + 464 39997619 - GSU2524 - sigma-54 dependent DNA-binding response regulator 2510 67.26 +1 2783251..2783754 - 167 39997620 - GSU2525 - nitroreductase family protein 2511 57.14 0 2783754..2784488 - 244 39997621 - GSU2526 - hypothetical protein 2512 68.20 +1 2784677..2785978 - 433 39997622 - GSU2527 - nitrite/sulfite reductase domain-containing protein 2513 68.27 +1 2786069..2788183 - 704 39997623 - GSU2528 - hypothetical protein 2514 67.83 +1 2788182..2790251 + 689 39997624 fusA-2 GSU2529 - elongation factor G 2515 70.29 +1 2790261..2791337 - 358 39997625 - GSU2530 - GTPase YjeQ 2516 63.28 0 2791476..2794637 - 1053 39997626 - GSU2531 - sensory box histidine kinase 2517 61.11 0 2794634..2795065 - 143 39997627 - GSU2532 - hypothetical protein 2518 63.70 0 2795087..2796298 - 403 39997628 - GSU2533 - hypothetical protein 2519 64.83 0 2796313..2797671 - 452 39997629 - GSU2534 - sensory box/response regulator 2520 61.26 0 2797751..2798194 - 147 39997630 - GSU2535 - response regulator 2521 65.31 0 2798512..2799324 - 270 39997631 - GSU2536 - dienelactone hydrolase family protein 2522 59.38 0 2799433..2801340 - 635 39997632 speA GSU2537 - arginine decarboxylase 2523 62.84 0 2801539..2802741 - 400 39997633 nspC GSU2538 - carboxynorspermidine decarboxylase 2524 62.74 0 2802886..2804082 - 398 39997634 LYS1 GSU2539 - saccharopine dehydrogenase 2525 60.62 0 2804108..2804653 - 181 39997635 - GSU2540 - Cro/CI family transcriptional regulator 2526 68.51 +1 2804942..2805754 + 270 39997636 proC GSU2541 - pyrroline-5-carboxylate reductase 2527 59.26 0 2805847..2806035 - 62 39997637 - GSU2542 - hypothetical protein 2528 61.52 0 2806022..2806798 - 258 39997638 - GSU2543 - polysaccharide deacetylase domain-containing protein 2529 65.37 0 2806908..2807603 - 231 39997639 - GSU2544 - hypothetical protein 2530 65.45 0 2807613..2808188 - 191 39997640 maf GSU2545 - maf protein 2531 54.61 -1 2808175..2808456 - 93 39997641 - GSU2546 - hypothetical protein 2532 66.51 +1 2808536..2809840 - 434 39997642 gid GSU2547 - tRNA (uracil-5-)-methyltransferase Gid 2533 64.22 0 2809837..2810244 - 135 39997643 - GSU2548 - hypothetical protein 2534 62.53 0 2810320..2812593 - 757 39997644 topA GSU2549 - DNA topoisomerase I 2535 68.16 +1 2812608..2813678 - 356 39997645 drpA GSU2550 - DNA processing protein DprA 2536 63.89 0 2813764..2814771 - 335 39997646 - GSU2551 - LysM domain-containing protein 2537 66.39 +1 2814839..2815567 - 242 39997647 - GSU2552 - putative lipoprotein 2538 62.04 0 2815761..2816474 + 237 39997648 - GSU2553 - glycosyl transferase, group 2 family protein 2539 54.76 -1 2816467..2816760 + 97 39997649 - GSU2554 - hypothetical protein 2540 64.44 0 2816750..2818363 + 537 39997650 - GSU2555 - melittin resistance protein, putative 2541 67.16 +1 2818455..2819669 + 404 39997651 - GSU2556 - U32 family peptidase 2542 69.34 +1 2819677..2820612 + 311 39997652 - GSU2557 - polysaccharide deacetylase family protein 2543 62.25 0 2820654..2821469 + 271 39997653 - GSU2558 - hypothetical protein 2544 65.95 0 2821751..2823292 - 513 39997654 - GSU2559 - exopolyphosphatase, putative 2545 67.90 +1 2823289..2824179 - 296 39997655 - GSU2560 - hypothetical protein 2546 65.71 0 2824228..2824752 - 174 39997656 - GSU2561 - hypothetical protein 2547 71.40 +1 2824780..2825265 - 161 39997657 sixA GSU2562 - phosphohistidine phosphatase SixA 2548 57.50 0 2825411..2825770 + 119 39997658 - GSU2563 - hypothetical protein 2549 65.41 0 2825830..2827107 + 425 39997659 - GSU2564 - hypothetical protein 2550 62.76 0 2827104..2827871 + 255 39997660 - GSU2565 - sensor histidine kinase 2551 53.15 -1 2827850..2827960 - 36 39997661 - GSU2566 - hypothetical protein 2552 64.61 0 2827974..2829725 + 583 39997662 - GSU2567 - sensor histidine kinase 2553 67.97 +1 2829875..2831179 - 434 39997663 - GSU2568 - MiaB-like tRNA modifying enzyme 2554 68.55 +1 2831179..2832240 - 353 39997664 trmU GSU2569 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2555 68.02 +1 2832260..2833444 - 394 39997665 - GSU2570 - cysteine desulfurase 2556 67.35 +1 2833441..2833878 - 145 39997666 - GSU2571 - Rrf2 family protein 2557 64.60 0 2833882..2834559 - 225 39997667 cysE GSU2572 - serine acetyltransferase 2558 72.60 +2 2834710..2835063 - 117 39997668 - GSU2573 - hypothetical protein 2559 63.23 0 2835091..2836197 - 368 39997669 - GSU2574 - response regulator 2560 66.90 +1 2836201..2838753 - 850 39997670 - GSU2575 - sensor histidine kinase/response regulator 2561 62.73 0 2838754..2839617 - 287 39997671 - GSU2576 - HD domain-containing protein 2562 66.00 0 2839604..2839903 - 99 39997672 - GSU2577 - hypothetical protein 2563 64.30 0 2840026..2840406 - 126 39997673 cheW-9 GSU2578 - purine-binding chemotaxis protein CheW 2564 65.93 0 2840564..2842195 - 543 39997674 - GSU2579 - methyl-accepting chemotaxis protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0