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Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1980 54.04 -1 2185291..2185971 - 226 39997090 - GSU1992 - Crp/FNR family transcriptional regulator 1981 41.67 -2 2186192..2186335 - 47 39997091 - GSU1993 - hypothetical protein 1982 54.90 -1 2186413..2187024 + 203 39997092 - GSU1994 - hypothetical protein 1983 55.69 0 2187104..2187832 - 242 39997093 - GSU1995 - hypothetical protein 1984 57.75 0 2187920..2188951 + 343 39997094 - GSU1996 - cytochrome c family protein 1985 61.44 0 2189041..2190342 - 433 39997095 - GSU1997 - PDZ domain-containing protein 1986 62.17 0 2190339..2191451 - 370 39997096 - GSU1998 - transporter, putative 1987 53.78 -1 2191488..2191712 - 74 39997097 hfq GSU1999 - hfq protein 1988 60.26 0 2191725..2192660 - 311 39997098 miaA GSU2000 - tRNA delta(2)-isopentenylpyrophosphate transferase 1989 65.51 0 2192669..2194489 - 606 39997099 mutL GSU2001 - DNA mismatch repair protein MutL 1990 61.05 0 2194489..2195592 - 367 39997100 - GSU2002 - hypothetical protein 1991 58.17 0 2195781..2196227 - 148 39997101 - GSU2003 - hypothetical protein 1992 63.68 0 2196283..2198121 - 612 39997102 - GSU2004 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein 1993 60.10 0 2198517..2199674 + 385 39997103 - GSU2005 - branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative 1994 58.13 0 2199786..2200652 + 288 39997104 - GSU2006 - branched-chain amino acid ABC transporter, permease protein 1995 58.85 0 2200668..2201741 + 357 39997105 - GSU2007 - branched-chain amino acid ABC transporter, permease protein 1996 60.42 0 2201752..2202471 + 239 39997106 - GSU2008 - branched-chain amino acid ABC transporter, ATP-binding protein 1997 58.87 0 2202499..2203203 + 234 39997107 - GSU2009 - branched-chain amino acid ABC transporter, ATP-binding protein 1998 54.71 -1 2203228..2203662 + 144 39997108 - GSU2010 - CBS domain-containing protein 1999 60.46 0 2203783..2204958 - 391 39997109 - GSU2011 - cysteine desulfurase 2000 57.69 0 2204955..2205812 - 285 39997110 - GSU2012 - NifU family protein 2001 59.62 0 2205968..2207386 - 472 39997111 - GSU2013 - phosphoglucomutase/phosphomannomutase family protein 2002 58.42 0 2207669..2207959 + 96 39997112 - GSU2014 - hypothetical protein 2003 60.49 0 2208031..2208483 + 150 39997113 - GSU2015 - mutT/nudix family protein 2004 56.75 0 2208461..2210860 - 799 39997114 - GSU2016 - sensory box/GGDEF family protein 2005 59.98 0 2210896..2211717 - 273 39997115 - GSU2017 - hypothetical protein 2006 56.64 0 2211797..2212195 - 132 39997116 gcvH-2 GSU2018 - glycine cleavage system H protein 2007 57.49 0 2212199..2213539 - 446 39997117 accC GSU2019 - acetyl-CoA carboxylase, biotin carboxylase 2008 59.75 0 2213570..2214046 - 158 39997118 accB GSU2020 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2009 60.21 0 2214096..2215163 - 355 39997119 pepQ-2 GSU2021 - xaa-pro dipeptidase 2010 58.94 0 2215167..2215619 - 150 39997120 aroQ GSU2022 - 3-dehydroquinate dehydratase 2011 60.33 0 2215648..2216010 - 120 39997121 - GSU2023 - hypothetical protein 2012 58.29 0 2215989..2217110 - 373 39997122 - GSU2024 - hypothetical protein 2013 60.79 0 2217113..2218201 - 362 39997123 aroB GSU2025 - 3-dehydroquinate synthase 2014 60.80 0 2218198..2218725 - 175 39997124 aroK GSU2026 - shikimate kinase 2015 61.25 0 2218709..2219890 - 393 39997125 aroC GSU2027 - chorismate synthase 2016 59.14 0 2219965..2222649 - 894 39997126 - GSU2028 - type IV pilus biogenesis protein PilQ 2017 57.56 0 2222660..2223208 - 182 39997127 - GSU2029 - putative lipoprotein 2018 53.60 -1 2223192..2223788 - 198 39997128 - GSU2030 - type IV pilus biogenesis protein PilO 2019 53.47 -1 2223826..2224401 - 191 39997129 - GSU2031 - type IV pilus biogenesis protein PilN 2020 55.68 0 2224395..2225450 - 351 39997130 - GSU2032 - type IV pilus biogenesis protein PilM 2021 44.80 -2 2225471..2225845 - 124 39997131 - GSU2033 - transcriptional regulator, putative 2022 55.89 0 2226192..2226785 - 197 39997132 - GSU2034 - hypothetical protein 2023 57.96 0 2226863..2227861 - 332 39997133 - GSU2035 - hypothetical protein 2024 56.15 0 2228053..2228442 - 129 39997134 - GSU2036 - hypothetical protein 2025 55.14 -1 2228420..2228905 - 161 39997135 - GSU2037 - hypothetical protein 2026 58.77 0 2228907..2234594 - 1895 39997136 - GSU2038 - hypothetical protein 2027 52.81 -1 2234591..2234893 - 100 39997137 - GSU2039 - hypothetical protein 2028 56.06 0 2235058..2235189 + 43 39997138 - GSU2040 - hypothetical protein 2029 60.75 0 2235760..2237127 - 455 39997139 - GSU2041 - sigma-54 dependent DNA-binding response regulator 2030 63.37 0 2237164..2238738 - 524 39997140 - GSU2042 - sensor histidine kinase 2031 59.23 0 2238751..2239530 - 259 39997141 pilD GSU2043 - type 4 prepilin-like proteins leader peptide processing enzyme 2032 60.81 0 2239587..2241875 - 762 39997142 - GSU2044 - sensory box/GGDEF family protein 2033 61.90 0 2242180..2244843 - 887 39997143 valS GSU2045 - valyl-tRNA synthetase 2034 61.98 0 2244947..2246161 - 404 39997144 - GSU2046 - response regulator 2035 62.37 0 2246279..2247466 - 395 39997145 - GSU2047 - hypothetical protein 2036 59.45 0 2247599..2248000 - 133 39997146 - GSU2048 - hypothetical protein 2037 63.03 0 2248053..2249234 - 393 39997147 argJ GSU2049 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2038 60.50 0 2249292..2251985 - 897 39997148 secA GSU2050 - preprotein translocase subunit SecA 2039 63.44 0 2252242..2253543 - 433 39997149 - GSU2051 - phenylacetate-coenzyme A ligase, putative 2040 67.40 +1 2253583..2254131 - 182 39997150 - GSU2052 - indolepyruvate oxidoreductase subunit B 2041 67.06 +1 2254128..2255909 - 593 39997151 - GSU2053 - indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative 2042 38.99 -2 2255951..2256109 + 52 39997152 - GSU2054 - hypothetical protein 2043 61.35 0 2256159..2257193 + 344 39997153 - GSU2055 - extracellular solute-binding protein 2044 61.90 0 2257267..2257749 + 160 39997154 - GSU2056 - tripartite ATP-independent periplasmic transporters, DctQ component, putative 2045 62.32 0 2257785..2259050 + 421 39997155 - GSU2057 - hypothetical protein 2046 48.98 -2 2259039..2259185 - 48 39997156 - GSU2058 - hypothetical protein 2047 58.13 0 2259172..2259651 + 159 39997157 - GSU2059 - hypothetical protein 2048 64.21 0 2259760..2261100 - 446 39997158 - GSU2060 - pmbA protein, putative 2049 58.44 0 2261110..2261559 - 149 39997159 - GSU2061 - acetyltransferase 2050 58.74 0 2261604..2262524 - 306 39997160 - GSU2062 - GGDEF domain-containing protein 2051 61.75 0 2262514..2263368 - 284 39997161 - GSU2063 - HD domain-containing protein 2052 65.83 0 2263755..2265431 - 558 39997162 recN GSU2064 - DNA repair protein RecN 2053 62.92 0 2265431..2266285 - 284 39997163 ppnK GSU2065 - ATP-NAD kinase 2054 60.29 0 2266427..2268937 + 836 39997164 glgP GSU2066 - glycogen phosphorylase 2055 61.07 0 2268975..2270297 + 440 39997165 - GSU2067 - recombination factor protein RarA 2056 62.40 0 2270294..2271253 + 319 39997166 - GSU2068 - 6-phosphofructokinase 2057 63.54 0 2271279..2271917 - 212 39997167 - GSU2069 - HAD family hydrolase 2058 59.80 0 2271901..2272206 - 101 39997168 - GSU2070 - HNH endonuclease family protein 2059 62.67 0 2272223..2272672 - 149 39997169 rnhA GSU2071 - ribonuclease HI 2060 58.81 0 2272656..2273279 - 207 39997170 - GSU2072 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative 2061 61.14 0 2273510..2278849 - 1779 39997171 - GSU2073 - EF hand domain/PKD domain-containing protein 2062 58.07 0 2278904..2279869 - 321 39997172 - GSU2074 - peptidyl-prolyl cis-trans isomerase domain-containing protein 2063 62.55 0 2279884..2281341 - 485 39997173 - GSU2075 - subtilisin 2064 60.83 0 2281463..2282884 - 473 39997174 - GSU2076 - cytochrome c family protein 2065 42.39 -2 2283949..2284191 + 80 39997175 - GSU2077 - hypothetical protein 2066 56.68 0 2284208..2285308 - 366 39997176 rodA GSU2078 - rod shape-determining protein RodA 2067 60.99 0 2285312..2287231 - 639 39997177 mrdA GSU2079 - penicillin-binding protein 2 2068 57.00 0 2287228..2287713 - 161 39997178 - GSU2080 - rod shape-determining protein MreD, putative 2069 60.00 0 2287706..2288530 - 274 39997179 mreC GSU2081 - rod shape-determining protein MreC 2070 62.37 0 2288634..2289122 - 162 39997180 - GSU2082 - hypothetical protein 2071 61.13 0 2289112..2290014 - 300 39997181 rfbA GSU2083 - glucose-1-phosphate thymidylyltransferase 2072 63.54 0 2290096..2290671 - 191 39997182 - GSU2084 - HAD superfamily hydrolase 2073 65.51 0 2290675..2292147 - 490 39997183 - GSU2085 - ADP-heptose synthase 2074 64.56 0 2292155..2293105 - 316 39997184 - GSU2086 - hypothetical protein 2075 64.21 0 2293102..2293671 - 189 39997185 gmhA GSU2087 - phosphoheptose isomerase 2076 65.71 0 2293668..2294822 - 384 39997186 - GSU2088 - glycosyl transferase, group 2 family protein 2077 62.64 0 2294930..2295973 - 347 39997187 mreB GSU2089 - rod shape-determining protein MreB 2078 60.92 0 2296177..2297760 + 527 39997188 - GSU2090 - hypothetical protein 2079 61.50 0 2297786..2298676 + 296 39997189 purC GSU2091 - phosphoribosylaminoimidazole-succinocarboxamide synthase 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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