version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 106 56.09 0 121302..121613 - 103 39995216 - GSU0105 - cytochrome c family protein, putative 107 59.69 0 121771..122544 + 257 39995217 - GSU0106 - soj protein 108 60.86 0 122567..123376 + 269 39995218 - GSU0107 - ParB-like nuclease domain-containing protein 109 56.10 0 123555..123980 + 141 39995219 - GSU0108 - ATP synthase F0, B' subunit, putative 110 56.16 0 124109..124603 + 164 39995220 atpF GSU0109 - ATP synthase F0, B subunit 111 58.38 0 124600..125142 + 180 39995221 atpH GSU0110 - F0F1 ATP synthase subunit delta 112 59.85 0 125151..126662 + 503 39995222 atpA GSU0111 - F0F1 ATP synthase subunit alpha 113 55.44 0 126684..127547 + 287 39995223 atpG GSU0112 - F0F1 ATP synthase subunit gamma 114 60.86 0 127605..129017 + 470 39995224 atpD GSU0113 - F0F1 ATP synthase subunit beta 115 53.96 -1 129078..129494 + 138 39995225 atpC GSU0114 - F0F1 ATP synthase subunit epsilon 116 60.26 0 129587..130600 + 337 39995226 pdxA GSU0115 - pyridoxal phosphate biosynthetic protein PdxA 117 58.81 0 130603..131556 + 317 39995227 - GSU0116 - transglycosylase 118 57.47 0 131671..132975 - 434 39995228 - GSU0117 - aminotransferase 119 65.02 0 133254..133859 - 201 39995229 - GSU0118 - hypothetical protein 120 60.77 0 133877..134215 - 112 39995230 - GSU0119 - glyoxalase family protein 121 66.67 +1 134385..134819 - 144 39995231 - GSU0120 - hydrogenase maturation protease 122 61.88 0 134859..135527 - 222 39995232 - GSU0121 - nickel-iron hydrogenase, b-type cytochrome subunit 123 63.30 0 135537..137231 - 564 39995233 - GSU0122 - nickel-dependent hydrogenase, large subunit 124 66.21 +1 137241..138326 - 361 39995234 - GSU0123 - nickel-dependent hydrogenase, small subunit 125 69.46 +1 138515..139231 - 238 39995235 - GSU0124 - competence protein F, putative 126 63.15 0 139235..139888 - 217 39995236 - GSU0125 - hypothetical protein 127 62.17 0 139913..140890 - 325 39995237 - GSU0126 - iron-sulfur cluster-binding protein 128 62.07 0 141097..141945 - 282 39995238 - GSU0127 - hypothetical protein 129 67.38 +1 141993..144248 + 751 39995239 priA GSU0128 - primosomal protein n` 130 57.92 0 144291..144839 + 182 39995240 def-1 GSU0129 - polypeptide deformylase 131 64.47 0 144850..145803 + 317 39995241 fmt GSU0130 - methionyl-tRNA formyltransferase 132 59.92 0 145806..146561 + 251 39995242 - GSU0131 - hypothetical protein 133 56.02 0 146719..147225 - 168 39995243 - GSU0132 - hypothetical protein 134 62.30 0 147502..148668 + 388 39995244 - GSU0133 - hypothetical protein 135 64.21 0 148677..149777 - 366 39995245 - GSU0134 - ribonuclease Z 136 62.78 0 149856..150833 - 325 39995246 hemB GSU0135 - delta-aminolevulinic acid dehydratase 137 62.10 0 151068..151505 + 145 39995247 - GSU0136 - hypothetical protein 138 58.66 0 151656..152354 - 232 39995248 - GSU0137 - hypothetical protein 139 59.90 0 152504..154084 + 526 39995249 prfC GSU0138 - peptide chain release factor 3 140 62.11 0 154312..154926 + 204 39995250 - GSU0139 - hypothetical protein 141 65.60 0 155133..155882 + 249 39995251 - GSU0140 - hypothetical protein 142 65.55 0 155890..157056 + 388 39995252 - GSU0141 - hypothetical protein 143 65.07 0 157068..157505 + 145 39995253 pgpA GSU0142 - phosphatidylglycerophosphatase A 144 68.92 +1 157502..158743 + 413 39995254 - GSU0143 - competence/damage-inducible protein CinA 145 62.02 0 158787..160916 + 709 39995255 - GSU0144 - sensory box histidine kinase 146 62.93 0 161049..162065 + 338 39995256 recA GSU0145 - recombinase A 147 63.82 0 162069..163229 + 386 39995257 pilT-1 GSU0146 - twitching motility protein PilT 148 68.54 +1 163258..163737 + 159 39995258 recX GSU0147 - regulatory protein RecX 149 64.88 0 163809..166436 + 875 39995259 alaS GSU0148 - alanyl-tRNA synthetase 150 60.93 0 166459..167574 + 371 39995260 - GSU0149 - sensor histidine kinase/response regulator 151 63.48 0 167708..168586 + 292 39995261 argB GSU0150 - acetylglutamate kinase 152 64.33 0 168667..169866 + 399 39995262 argD GSU0151 - acetylornithine aminotransferase 153 64.04 0 169863..170774 + 303 39995263 argF GSU0152 - ornithine carbamoyltransferase 154 62.82 0 170807..172027 + 406 39995264 argG GSU0153 - argininosuccinate synthase 155 60.59 0 172194..172637 + 147 39995265 - GSU0154 - mutT/nudix family protein 156 63.57 0 172648..173811 + 387 39995266 - GSU0155 - hypothetical protein 157 63.62 0 173833..175209 + 458 39995267 argH GSU0156 - argininosuccinate lyase 158 68.86 +1 175248..176021 + 257 39995268 - GSU0157 - fibronectin type III domain-containing protein 159 63.72 0 176159..177412 + 417 39995269 lysA GSU0158 - diaminopimelate decarboxylase 160 63.69 0 177446..178318 + 290 39995270 dapA GSU0159 - dihydrodipicolinate synthase 161 65.42 0 178340..179140 + 266 39995271 dapB GSU0160 - dihydrodipicolinate reductase 162 45.74 -2 179230..179358 + 42 39995272 - GSU0161 - hypothetical protein 163 62.77 0 179342..180574 + 410 39995273 - GSU0162 - L,L-diaminopimelate aminotransferase 164 52.08 -1 180697..180984 + 95 39995274 - GSU0163 - hypothetical protein 165 56.20 0 180981..181343 + 120 39995275 - GSU0164 - hypothetical protein 166 39.23 -2 181411..182766 + 451 39995276 - GSU0165 - hypothetical protein 167 39.39 -2 182895..182993 - 32 39995277 - GSU0166 - hypothetical protein 168 59.15 0 183332..183637 + 101 39995278 - GSU0167 - hypothetical protein 169 58.44 0 183883..185049 + 388 39995279 - GSU0168 - Fic family protein 170 62.70 0 185171..186808 + 545 39995280 - GSU0169 - ABC transporter, ATP-binding protein 171 64.60 0 186838..187320 + 160 39995281 - GSU0170 - hypothetical protein 172 69.08 +1 187341..187796 + 151 39995282 - GSU0171 - YaiI/YqxD family protein 173 58.47 0 188001..188378 + 125 39995283 - GSU0172 - hypothetical protein 174 68.38 +1 188832..189356 + 174 39995284 - GSU0173 - hypothetical protein 175 63.98 0 189553..191115 - 520 39995285 - GSU0174 - acetyl-CoA hydrolase/transferase family protein 176 66.83 +1 191349..191960 + 203 39995286 - GSU0175 - TetR family transcriptional regulator 177 62.40 0 192082..192456 + 124 39995287 - GSU0176 - hypothetical protein 178 62.26 0 192466..192987 + 173 39995288 - GSU0177 - acetyltransferase 179 58.84 0 193093..193437 - 114 39995289 - GSU0178 - hypothetical protein 180 61.32 0 193592..194227 + 211 39995290 - GSU0179 - NADPH-dependent FMN reductase domain-containing protein 181 59.22 0 194383..194892 + 169 39995291 - GSU0180 - hypothetical protein 182 60.00 0 194938..195867 - 309 39995292 - GSU0181 - putative lipoprotein 183 62.05 0 196023..196325 - 100 39995293 - GSU0182 - putative lipoprotein 184 63.38 0 196424..197731 - 435 39995294 - GSU0183 - putative lipoprotein 185 67.28 +1 198316..198963 + 215 39995295 - GSU0184 - HAD family hydrolase 186 65.68 0 198989..200209 - 406 39995296 - GSU0185 - hypothetical protein 187 64.66 0 200953..201300 - 115 39995297 - GSU0187 - hypothetical protein 188 60.29 0 201297..201641 - 114 39995298 - GSU0188 - hypothetical protein 189 63.92 0 201957..203339 + 460 39995299 dbpA GSU0189 - ATP-dependent RNA helicase DbpA 190 51.28 -1 203317..203628 - 103 39995300 - GSU0190 - hypothetical protein 191 47.26 -2 203766..203966 - 66 39995301 - GSU0191 - cold-shock domain-contain protein 192 52.67 -1 204369..204611 + 80 39995302 - GSU0192 - hypothetical protein 193 66.40 +1 204852..205991 - 379 39995303 - GSU0193 - L-sorbosone dehydrogenase, putative 194 69.25 +1 206161..207243 + 360 39995304 - GSU0194 - hypothetical protein 195 57.99 0 207298..207516 + 72 39995305 - GSU0195 - hypothetical protein 196 66.05 0 207610..208098 - 162 39995306 - GSU0196 - thioesterase family protein 197 67.71 +1 208179..208943 - 254 39995307 - GSU0197 - short chain dehydrogenase/reductase family oxidoreductase 198 64.13 0 209066..209656 + 196 39995308 - GSU0198 - hypothetical protein 199 53.11 -1 209939..210115 - 58 39995309 - GSU0199 - hypothetical protein 200 64.12 0 210179..210649 + 156 39995310 iorA GSU0200 - isoquinoline 1-oxidoreductase, alpha subunit 201 66.99 +1 210646..212817 + 723 39995311 iorB GSU0201 - isoquinoline 1-oxidoreductase, beta subunit 202 68.56 +1 212880..213620 + 246 39995312 - GSU0202 - hypothetical protein 203 69.44 +1 213617..214228 + 203 39995313 - GSU0203 - hypothetical protein 204 64.39 0 214293..215651 + 452 39995314 - GSU0204 - radical SAM domain-containing protein 205 60.93 0 215676..216302 + 208 39995315 - GSU0205 - TetR family transcriptional regulator 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.