version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1480 61.44 0 1633917..1634777 + 286 39996590 aroE GSU1490 - shikimate 5-dehydrogenase 1481 58.64 0 1634843..1636549 + 568 39996591 - GSU1491 - type IV pilus biogenesis protein PilB 1482 59.84 0 1636677..1637774 + 365 39996592 pilT-4 GSU1492 - twitching motility protein PilT 1483 55.09 -1 1637811..1639028 + 405 39996593 - GSU1493 - type IV pilus biogenesis protein PilC 1484 59.35 0 1639032..1640684 + 550 39996594 - GSU1494 - sensory box histidine kinase 1485 58.46 0 1640718..1642094 + 458 39996595 - GSU1495 - sigma-54 dependent DNA-binding response regulator 1486 49.08 -2 1642257..1642529 + 90 39996596 - GSU1496 - pilin domain-containing protein 1487 44.80 -2 1642557..1642931 + 124 39996597 - GSU1497 - hypothetical protein 1488 43.80 -2 1642999..1644747 + 582 39996598 - GSU1498 - hypothetical protein 1489 49.12 -2 1644744..1645535 + 263 39996599 - GSU1499 - hypothetical protein 1490 50.81 -1 1645589..1646389 + 266 39996600 - GSU1500 - hypothetical protein 1491 49.23 -2 1646403..1647314 + 303 39996601 - GSU1501 - ABC transporter, ATP-binding protein 1492 53.92 -1 1647311..1648165 + 284 39996602 - GSU1502 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1493 56.48 0 1648173..1649075 + 300 39996603 - GSU1503 - glycosyl transferase, group 2 family protein 1494 56.10 0 1649079..1649930 + 283 39996604 - GSU1504 - ABC transporter permease 1495 53.11 -1 1649937..1651205 + 422 39996605 - GSU1505 - ABC transporter, ATP-binding protein 1496 53.54 -1 1651202..1652161 + 319 39996606 - GSU1506 - hypothetical protein 1497 49.64 -2 1652233..1653195 + 320 39996607 - GSU1507 - heptosyltransferase family protein, putative 1498 39.09 -2 1653235..1654380 + 381 39996608 - GSU1508 - hypothetical protein 1499 37.55 -2 1654388..1655383 + 331 39996609 - GSU1509 - glycosyl transferase, group 2 family protein 1500 46.41 -2 1655522..1656454 + 310 39996610 - GSU1510 - glycosyl transferase, group 2 family protein 1501 41.60 -2 1657352..1658500 + 382 39996611 - GSU1511 - glycosyl transferase, group 1 family protein 1502 57.80 0 1658573..1659937 + 454 39996612 - GSU1512 - amine oxidase, flavin-containing 1503 50.59 -1 1659934..1660860 + 308 39996613 - GSU1513 - hypothetical protein 1504 59.89 0 1660857..1661948 + 363 39996614 - GSU1514 - heptosyltransferase family protein 1505 59.08 0 1662153..1664063 + 636 39996615 thrS GSU1515 - threonyl-tRNA synthetase 1506 54.72 -1 1664075..1664593 + 172 39996616 infC GSU1516 - translation initiation factor IF-3 1507 53.54 -1 1664631..1664828 + 65 39996617 rpmI GSU1517 - 50S ribosomal protein L35 1508 57.06 0 1664918..1665271 + 117 39996618 rplT GSU1518 - 50S ribosomal protein L20 1509 59.22 0 1665346..1666365 + 339 39996619 pheS GSU1519 - phenylalanyl-tRNA synthetase, alpha subunit 1510 60.39 0 1666433..1668838 + 801 39996620 pheT GSU1520 - phenylalanyl-tRNA synthetase, beta subunit 1511 50.72 -1 1668933..1669208 + 91 39996621 ihfA-1 GSU1521 - integration host factor, alpha subunit 1512 54.80 -1 1669226..1669579 + 117 39996622 - GSU1522 - transcriptional regulator, putative 1513 59.82 0 1669765..1670553 + 262 39996623 surE GSU1523 - stationary-phase survival protein SurE 1514 60.22 0 1670581..1671231 + 216 39996624 pcM GSU1524 - protein-L-isoaspartate O-methyltransferase 1515 57.35 0 1671264..1672250 + 328 39996625 - GSU1525 - sigma-70 family RNA polymerase sigma factor 1516 57.95 0 1672285..1672800 + 171 39996626 apt GSU1526 - adenine phosphoribosyltransferase 1517 59.84 0 1673198..1674487 + 429 39996627 - GSU1527 - hypothetical protein 1518 58.19 0 1674735..1675631 + 298 39996628 - GSU1528 - ABC transporter, periplasmic substrate-binding protein 1519 58.75 0 1675821..1678232 + 803 39996629 - GSU1529 - sensory box histidine kinase/response regulator 1520 62.67 0 1678319..1679194 - 291 39996630 hisG GSU1530 - ATP phosphoribosyltransferase 1521 59.26 0 1679191..1679568 - 125 39996631 hisI GSU1531 - phosphoribosyl-AMP cyclohydrolase 1522 69.88 +1 1679914..1680255 + 113 39996632 - GSU1532 - hypothetical protein 1523 70.52 +1 1680276..1683440 + 1054 39996633 recC GSU1533 - exodeoxyribonuclease V, gamma subunit 1524 71.18 +1 1683437..1687051 + 1204 39996634 recB GSU1534 - exodeoxyribonuclease V, beta subunit 1525 69.74 +1 1687048..1688835 + 595 39996635 recD GSU1535 - exodeoxyribonuclease V, alpha subunit 1526 72.58 +2 1688874..1689566 - 230 39996636 - GSU1536 - hypothetical protein 1527 66.36 +1 1689563..1691185 - 540 39996637 - GSU1537 - general secretion pathway protein-related protein 1528 65.08 0 1691494..1692753 + 419 39996638 - GSU1538 - methylamine utilization protein MauG, putative 1529 67.65 +1 1692893..1693708 + 271 39996639 xth GSU1539 - exonuclease III 1530 42.72 -2 1694228..1695442 + 404 39996640 - GSU1540 - putative lipoprotein 1531 53.23 -1 1695669..1696472 + 267 39996641 - GSU1541 - hypothetical protein 1532 54.76 -1 1696510..1696803 - 97 39996642 - GSU1542 - Cro/CI family transcriptional regulator 1533 51.95 -1 1696802..1697134 + 110 39996643 - GSU1543 - hypothetical protein 1534 63.31 0 1697206..1697652 + 148 39996644 - GSU1544 - hypothetical protein 1535 62.28 0 1697747..1698361 + 204 39996645 - GSU1545 - amino acid transporter LysE 1536 56.75 0 1698540..1699406 + 288 39996646 - GSU1546 - hypothetical protein 1537 67.44 +1 1699486..1700907 + 473 39996647 - GSU1547 - TPR domain-containing protein 1538 65.78 0 1701044..1701493 + 149 39996648 - GSU1548 - hypothetical protein 1539 66.34 +1 1701521..1702129 + 202 39996649 - GSU1549 - putative lipoprotein 1540 65.69 0 1702101..1702304 - 67 39996650 - GSU1550 - 4-oxalocrotonate tautomerase family protein 1541 63.44 0 1702598..1704583 + 661 39996651 - GSU1551 - signal domain-containing protein 1542 62.71 0 1704642..1705172 + 176 39996652 - GSU1552 - hypothetical protein 1543 60.10 0 1705183..1705563 + 126 39996653 - GSU1553 - hypothetical protein 1544 63.85 0 1705571..1706740 + 389 39996654 - GSU1554 - GGDEF domain-containing protein 1545 59.96 0 1706780..1710118 - 1112 39996655 - GSU1555 - sensory box histidine kinase/response regulator 1546 60.32 0 1710355..1711284 - 309 39996656 - GSU1556 - hypothetical protein 1547 60.24 0 1711580..1712404 + 274 39996657 - GSU1557 - mechanosensitive ion channel family protein 1548 67.59 +1 1712555..1712662 + 35 39996658 - GSU1558 - hypothetical protein 1549 53.51 -1 1712798..1712911 + 37 39996659 - GSU1559 - hypothetical protein 1550 66.18 +1 1713165..1714403 + 412 39996660 - GSU1560 - radical SAM domain-containing protein 1551 64.35 0 1714573..1716561 + 662 39996661 - GSU1561 - 1A family penicillin-binding protein 1552 63.33 0 1716575..1716874 + 99 39996662 - GSU1562 - hypothetical protein 1553 56.25 0 1716856..1716951 - 31 39996663 - GSU1563 - hypothetical protein 1554 63.51 0 1717831..1719891 + 686 39996664 - GSU1564 - Glu/Leu/Phe/Val dehydrogenase family protein 1555 58.85 0 1719920..1720111 + 63 39996665 - GSU1565 - hypothetical protein 1556 54.47 -1 1720220..1720678 + 152 39996666 - GSU1566 - hypothetical protein 1557 61.44 0 1721015..1721875 + 286 39996667 - GSU1567 - M48 family peptidase 1558 58.84 0 1721898..1722191 + 97 39996668 - GSU1568 - hypothetical protein 1559 49.54 -2 1722264..1722479 + 71 39996669 - GSU1569 - CopG family transcriptional regulator 1560 53.33 -1 1722702..1723646 + 314 39996670 - GSU1570 - TerC family membrane protein 1561 61.20 0 1723859..1724956 + 365 39996671 - GSU1571 - hypothetical protein 1562 58.71 0 1725013..1725540 + 175 39996672 - GSU1572 - riboflavin biosynthesis protein RibD domain-containing protein 1563 57.94 0 1725783..1726538 + 251 39996673 - GSU1573 - CAAX amino terminal protease family protein 1564 57.68 0 1726535..1726801 + 88 39996674 - GSU1574 - hypothetical protein 1565 62.14 0 1726864..1727592 + 242 39996675 - GSU1575 - hypothetical protein 1566 58.98 0 1727617..1728423 + 268 39996676 - GSU1576 - short chain dehydrogenase/reductase family oxidoreductase 1567 61.96 0 1729228..1729758 + 176 39996677 cobO GSU1577 - cob(I)alamin adenosyltransferase 1568 62.22 0 1729770..1730174 + 134 39996678 - GSU1578 - B12-binding protein 1569 62.81 0 1730261..1731220 + 319 39996679 - GSU1579 - LAO/AO transport system ATPase 1570 59.14 0 1731236..1732165 + 309 39996680 - GSU1580 - ErfK/YbiS/YcfS/YnhG family protein 1571 60.84 0 1732220..1734862 + 880 39996681 - GSU1581 - polyA polymerase family protein 1572 60.65 0 1734899..1736260 - 453 39996682 bioA GSU1582 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase 1573 61.96 0 1736253..1736975 - 240 39996683 bioD GSU1583 - dethiobiotin synthase 1574 60.51 0 1736968..1737957 - 329 39996684 bioB GSU1584 - biotin synthetase 1575 56.67 0 1738189..1738668 + 159 39996685 - GSU1585 - hypothetical protein 1576 58.64 0 1738694..1739851 + 385 39996686 nusA GSU1586 - transcription elongation factor NusA 1577 58.09 0 1739855..1740472 + 205 39996687 - GSU1587 - ribosomal protein L7Ae family protein 1578 59.95 0 1740450..1743101 + 883 39996688 infB GSU1588 - translation initiation factor IF-2 1579 53.78 -1 1743169..1743525 + 118 39996689 rbfA GSU1589 - ribosome-binding factor A 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0