version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1426 58.10 0 1574846..1575370 + 174 39996536 - GSU1436 - hypothetical protein 1427 57.99 0 1575391..1576185 + 264 39996537 - GSU1437 - M48 family peptidase 1428 60.07 0 1576188..1577066 + 292 39996538 - GSU1438 - hypothetical protein 1429 62.64 0 1577012..1578055 - 347 39996539 - GSU1439 - hypothetical protein 1430 62.99 0 1577267..1578244 + 325 39996540 - GSU1440 - hypothetical protein 1431 58.60 0 1578257..1578541 + 94 39996541 - GSU1441 - ferredoxin family protein 1432 54.70 -1 1578631..1579332 + 233 39996542 - GSU1442 - carbonic anhydrase family protein 1433 55.17 -1 1579416..1581380 - 654 39996543 - GSU1443 - sensor histidine kinase/response regulator 1434 59.73 0 1581389..1582282 - 297 39996544 - GSU1444 - hypothetical protein 1435 55.72 0 1582943..1584724 + 593 39996545 - GSU1445 - TonB-dependent receptor, putative 1436 60.44 0 1585073..1586404 + 443 39996546 - GSU1446 - radical SAM domain-containing protein 1437 55.25 -1 1586465..1586683 - 72 39996547 - GSU1447 - hypothetical protein 1438 62.17 0 1586708..1587574 - 288 39996548 - GSU1448 - phosphotransferase domain-containing protein 1439 55.56 0 1587690..1587968 + 92 39996549 - GSU1449 - hypothetical protein 1440 57.46 0 1587992..1588621 + 209 39996550 - GSU1450 - endonuclease III, putative 1441 59.40 0 1588799..1589665 + 288 39996551 - GSU1451 - 3-hydroxyisobutyrate dehydrogenase family protein 1442 60.42 0 1589716..1591203 - 495 39996552 - GSU1452 - RNA methyltransferase 1443 56.60 0 1591350..1592462 + 370 39996553 - GSU1453 - hypothetical protein 1444 56.45 0 1592452..1593870 + 472 39996554 - GSU1454 - glycosyl transferase, group 2 family protein 1445 60.61 0 1593842..1594039 + 65 39996555 - GSU1455 - hypothetical protein 1446 63.94 0 1594036..1596453 + 805 39996556 - GSU1456 - hypothetical protein 1447 61.34 0 1596512..1597225 + 237 39996557 - GSU1457 - polysaccharide deacetylase domain-containing protein 1448 62.22 0 1597229..1598803 + 524 39996558 - GSU1458 - TPR domain-containing protein 1449 61.49 0 1598892..1599953 + 353 39996559 ispG GSU1459 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate 1450 61.76 0 1599970..1601682 + 570 39996560 proS GSU1460 - prolyl-tRNA synthetase 1451 63.19 0 1601706..1602425 + 239 39996561 pyrF GSU1461 - orotidine 5`-phosphate decarboxylase 1452 60.57 0 1602445..1603182 + 245 39996562 - GSU1462 - RNA methyltransferase 1453 56.36 0 1603748..1605532 + 594 39996563 aspS GSU1463 - aspartyl-tRNA synthetase 1454 57.39 0 1605546..1606235 + 229 39996564 - GSU1464 - LysM domain-containing protein 1455 54.43 -1 1606538..1608760 + 740 39996565 icd GSU1465 - isocitrate dehydrogenase, NADP-dependent 1456 58.07 0 1608804..1609757 + 317 39996566 mdh GSU1466 - malate dehydrogenase 1457 48.72 -2 1609952..1610146 + 64 39996567 - GSU1467 - iron-sulfur cluster-binding protein 1458 56.70 0 1610170..1611303 + 377 39996568 - GSU1468 - 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1459 57.42 0 1611306..1612127 + 273 39996569 - GSU1469 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1460 56.47 0 1612153..1612701 + 182 39996570 - GSU1470 - keto/oxoacid ferredoxin oxidoreductase, gamma subunit 1461 55.36 0 1612857..1614032 + 391 39996571 - GSU1471 - HD domain-containing protein 1462 51.92 -1 1614107..1615069 + 320 39996572 - GSU1472 - hypothetical protein 1463 51.90 -1 1615103..1615840 + 245 39996573 - GSU1473 - hypothetical protein 1464 55.28 -1 1615949..1616563 + 204 39996574 - GSU1474 - DedA family protein 1465 59.90 0 1616582..1617349 + 255 39996575 - GSU1475 - RNA methyltransferase 1466 56.80 0 1617346..1617639 + 97 39996576 - GSU1476 - hypothetical protein 1467 57.61 0 1617666..1618250 + 194 39996577 - GSU1477 - LemA family protein 1468 62.56 0 1618247..1619146 + 299 39996578 - GSU1478 - hypothetical protein 1469 62.20 0 1619163..1619789 + 208 39996579 - GSU1479 - hypothetical protein 1470 59.97 0 1619796..1621349 - 517 39996580 - GSU1480 - EmrB/QacA family drug resistance transporter 1471 64.25 0 1621362..1622480 - 372 39996581 - GSU1481 - multidrug resistance protein, putative 1472 61.90 0 1622483..1623763 - 426 39996582 - GSU1482 - outer membrane efflux protein 1473 58.22 0 1623741..1624190 - 149 39996583 - GSU1483 - MarR family transcriptional regulator 1474 61.76 0 1624300..1626543 - 747 39996584 - GSU1484 - soluble lytic murein transglycosylase, putative 1475 62.52 0 1626769..1629060 + 763 39996585 - GSU1485 - ribonuclease R, putative 1476 55.71 0 1629155..1630021 + 288 39996586 - GSU1486 - MttB family protein 1477 59.96 0 1630018..1630986 + 322 39996587 ribF GSU1487 - riboflavin biosynthesis protein RibF 1478 62.73 0 1631034..1632023 + 329 39996588 - GSU1488 - hypothetical protein 1479 57.59 0 1632043..1633914 + 623 39996589 - GSU1489 - hypothetical protein 1480 61.44 0 1633917..1634777 + 286 39996590 aroE GSU1490 - shikimate 5-dehydrogenase 1481 58.64 0 1634843..1636549 + 568 39996591 - GSU1491 - type IV pilus biogenesis protein PilB 1482 59.84 0 1636677..1637774 + 365 39996592 pilT-4 GSU1492 - twitching motility protein PilT 1483 55.09 -1 1637811..1639028 + 405 39996593 - GSU1493 - type IV pilus biogenesis protein PilC 1484 59.35 0 1639032..1640684 + 550 39996594 - GSU1494 - sensory box histidine kinase 1485 58.46 0 1640718..1642094 + 458 39996595 - GSU1495 - sigma-54 dependent DNA-binding response regulator 1486 49.08 -2 1642257..1642529 + 90 39996596 - GSU1496 - pilin domain-containing protein 1487 44.80 -2 1642557..1642931 + 124 39996597 - GSU1497 - hypothetical protein 1488 43.80 -2 1642999..1644747 + 582 39996598 - GSU1498 - hypothetical protein 1489 49.12 -2 1644744..1645535 + 263 39996599 - GSU1499 - hypothetical protein 1490 50.81 -1 1645589..1646389 + 266 39996600 - GSU1500 - hypothetical protein 1491 49.23 -2 1646403..1647314 + 303 39996601 - GSU1501 - ABC transporter, ATP-binding protein 1492 53.92 -1 1647311..1648165 + 284 39996602 - GSU1502 - phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase 1493 56.48 0 1648173..1649075 + 300 39996603 - GSU1503 - glycosyl transferase, group 2 family protein 1494 56.10 0 1649079..1649930 + 283 39996604 - GSU1504 - ABC transporter permease 1495 53.11 -1 1649937..1651205 + 422 39996605 - GSU1505 - ABC transporter, ATP-binding protein 1496 53.54 -1 1651202..1652161 + 319 39996606 - GSU1506 - hypothetical protein 1497 49.64 -2 1652233..1653195 + 320 39996607 - GSU1507 - heptosyltransferase family protein, putative 1498 39.09 -2 1653235..1654380 + 381 39996608 - GSU1508 - hypothetical protein 1499 37.55 -2 1654388..1655383 + 331 39996609 - GSU1509 - glycosyl transferase, group 2 family protein 1500 46.41 -2 1655522..1656454 + 310 39996610 - GSU1510 - glycosyl transferase, group 2 family protein 1501 41.60 -2 1657352..1658500 + 382 39996611 - GSU1511 - glycosyl transferase, group 1 family protein 1502 57.80 0 1658573..1659937 + 454 39996612 - GSU1512 - amine oxidase, flavin-containing 1503 50.59 -1 1659934..1660860 + 308 39996613 - GSU1513 - hypothetical protein 1504 59.89 0 1660857..1661948 + 363 39996614 - GSU1514 - heptosyltransferase family protein 1505 59.08 0 1662153..1664063 + 636 39996615 thrS GSU1515 - threonyl-tRNA synthetase 1506 54.72 -1 1664075..1664593 + 172 39996616 infC GSU1516 - translation initiation factor IF-3 1507 53.54 -1 1664631..1664828 + 65 39996617 rpmI GSU1517 - 50S ribosomal protein L35 1508 57.06 0 1664918..1665271 + 117 39996618 rplT GSU1518 - 50S ribosomal protein L20 1509 59.22 0 1665346..1666365 + 339 39996619 pheS GSU1519 - phenylalanyl-tRNA synthetase, alpha subunit 1510 60.39 0 1666433..1668838 + 801 39996620 pheT GSU1520 - phenylalanyl-tRNA synthetase, beta subunit 1511 50.72 -1 1668933..1669208 + 91 39996621 ihfA-1 GSU1521 - integration host factor, alpha subunit 1512 54.80 -1 1669226..1669579 + 117 39996622 - GSU1522 - transcriptional regulator, putative 1513 59.82 0 1669765..1670553 + 262 39996623 surE GSU1523 - stationary-phase survival protein SurE 1514 60.22 0 1670581..1671231 + 216 39996624 pcM GSU1524 - protein-L-isoaspartate O-methyltransferase 1515 57.35 0 1671264..1672250 + 328 39996625 - GSU1525 - sigma-70 family RNA polymerase sigma factor 1516 57.95 0 1672285..1672800 + 171 39996626 apt GSU1526 - adenine phosphoribosyltransferase 1517 59.84 0 1673198..1674487 + 429 39996627 - GSU1527 - hypothetical protein 1518 58.19 0 1674735..1675631 + 298 39996628 - GSU1528 - ABC transporter, periplasmic substrate-binding protein 1519 58.75 0 1675821..1678232 + 803 39996629 - GSU1529 - sensory box histidine kinase/response regulator 1520 62.67 0 1678319..1679194 - 291 39996630 hisG GSU1530 - ATP phosphoribosyltransferase 1521 59.26 0 1679191..1679568 - 125 39996631 hisI GSU1531 - phosphoribosyl-AMP cyclohydrolase 1522 69.88 +1 1679914..1680255 + 113 39996632 - GSU1532 - hypothetical protein 1523 70.52 +1 1680276..1683440 + 1054 39996633 recC GSU1533 - exodeoxyribonuclease V, gamma subunit 1524 71.18 +1 1683437..1687051 + 1204 39996634 recB GSU1534 - exodeoxyribonuclease V, beta subunit 1525 69.74 +1 1687048..1688835 + 595 39996635 recD GSU1535 - exodeoxyribonuclease V, alpha subunit 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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