version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 64 63.51 0 79477..79698 + 73 39995174 - GSU0063 - hypothetical protein 65 55.00 -1 79725..81044 - 439 39995175 - GSU0064 - integrative genetic element Gsu32, integrase 66 58.15 0 81425..81964 + 179 39995176 - GSU0065 - cytidine/deoxycytidylate deaminase family protein 67 59.04 0 82566..83273 + 235 39995177 - GSU0066 - AhpC/Tsa family protein, selenocysteine-containing 68 57.87 0 83254..83901 + 215 39995178 - GSU0067 - carbonic anhydrase 69 60.46 0 84006..84488 + 160 39995179 - GSU0068 - cytochrome c family protein 70 61.63 0 84481..85254 + 257 39995180 - GSU0069 - oxidoreductase, iron-sulfur cluster-binding subunit 71 58.93 0 85257..86510 + 417 39995181 - GSU0070 - oxidoreductase, membrane subunit 72 54.89 -1 86581..87030 - 149 39995182 - GSU0071 - hypothetical protein 73 48.96 -2 87371..87466 - 31 39995183 - GSU0072 - hypothetical protein 74 60.70 0 87476..88078 - 200 39995184 - GSU0073 - outer membrane protein, putative 75 62.84 0 88132..88785 - 217 39995185 elbB GSU0074 - isoprenoid biosynthesis protein 76 64.81 0 88858..89775 - 305 39995186 - GSU0075 - hypothetical protein 77 63.50 0 89887..90486 + 199 39995187 - GSU0076 - hypothetical protein 78 59.00 0 90505..90765 + 86 39995188 - GSU0077 - hypothetical protein 79 65.50 0 90775..91116 + 113 39995189 - GSU0078 - hypothetical protein 80 58.54 0 91135..91725 - 196 39995190 - GSU0079 - Cro/CI family transcriptional regulator 81 63.06 0 91907..93322 + 471 39995191 degQ GSU0080 - protease degQ 82 61.36 0 93366..93629 + 87 39995192 - GSU0081 - hypothetical protein 83 65.43 0 93714..94682 + 322 39995193 rluD GSU0082 - ribosomal large subunit pseudouridine synthase D 84 64.92 0 94685..95485 + 266 39995194 - GSU0083 - hypothetical protein 85 67.43 +1 95499..96674 + 391 39995195 - GSU0084 - hypothetical protein 86 64.06 0 96773..97615 - 280 39995196 - GSU0085 - heterodisulfide reductase, cytochrome reductase subunit 87 57.35 0 97614..98021 + 135 39995197 - GSU0086 - hypothetical protein 88 63.38 0 98008..99012 - 334 39995198 - GSU0087 - heterodisulfide reductase, iron-sulfur binding subunit, putative 89 65.70 0 99056..99985 - 309 39995199 - GSU0088 - heterodisulfide reductase subunit 90 62.28 0 100019..100519 - 166 39995200 - GSU0089 - heterodisulfide reductase subunit 91 64.26 0 100519..102516 - 665 39995201 - GSU0090 - heterodisulfide reductase subunit 92 64.09 0 102517..103407 - 296 39995202 - GSU0091 - heterodisulfide reductase subunit 93 59.74 0 103404..103952 - 182 39995203 - GSU0092 - heterodisulfide reductase subunit 94 61.92 0 104580..106412 + 610 39995204 - GSU0093 - ABC transporter, ATP-binding/permease protein 95 63.51 0 106783..108522 + 579 39995205 dnaX GSU0094 - DNA polymerase III, gamma and tau subunits 96 56.19 0 108593..108907 + 104 39995206 - GSU0095 - hypothetical protein 97 62.63 0 109096..109689 + 197 39995207 recR GSU0096 - recombination protein RecR 98 62.90 0 109754..113341 + 1195 39995208 - GSU0097 - pyruvate ferredoxin/flavodoxin oxidoreductase 99 57.93 0 113608..114099 + 163 39995209 - GSU0098 - MglB protein 100 56.29 0 114118..114705 + 195 39995210 - GSU0099 - MglA protein 101 53.33 -1 114689..114793 - 34 39995211 - GSU0100 - hypothetical protein 102 62.45 0 114856..116634 + 592 39995212 - GSU0101 - ABC transporter, ATP-binding/permease protein 103 63.79 0 116665..118575 + 636 39995213 selB GSU0102 - selenocysteine-specific translation elongation factor 104 58.24 0 118723..120834 + 703 39995214 - GSU0103 - sensory box histidine kinase 105 61.03 0 120852..121241 + 129 39995215 - GSU0104 - response regulator, putative 106 56.09 0 121302..121613 - 103 39995216 - GSU0105 - cytochrome c family protein, putative 107 59.69 0 121771..122544 + 257 39995217 - GSU0106 - soj protein 108 60.86 0 122567..123376 + 269 39995218 - GSU0107 - ParB-like nuclease domain-containing protein 109 56.10 0 123555..123980 + 141 39995219 - GSU0108 - ATP synthase F0, B' subunit, putative 110 56.16 0 124109..124603 + 164 39995220 atpF GSU0109 - ATP synthase F0, B subunit 111 58.38 0 124600..125142 + 180 39995221 atpH GSU0110 - F0F1 ATP synthase subunit delta 112 59.85 0 125151..126662 + 503 39995222 atpA GSU0111 - F0F1 ATP synthase subunit alpha 113 55.44 0 126684..127547 + 287 39995223 atpG GSU0112 - F0F1 ATP synthase subunit gamma 114 60.86 0 127605..129017 + 470 39995224 atpD GSU0113 - F0F1 ATP synthase subunit beta 115 53.96 -1 129078..129494 + 138 39995225 atpC GSU0114 - F0F1 ATP synthase subunit epsilon 116 60.26 0 129587..130600 + 337 39995226 pdxA GSU0115 - pyridoxal phosphate biosynthetic protein PdxA 117 58.81 0 130603..131556 + 317 39995227 - GSU0116 - transglycosylase 118 57.47 0 131671..132975 - 434 39995228 - GSU0117 - aminotransferase 119 65.02 0 133254..133859 - 201 39995229 - GSU0118 - hypothetical protein 120 60.77 0 133877..134215 - 112 39995230 - GSU0119 - glyoxalase family protein 121 66.67 +1 134385..134819 - 144 39995231 - GSU0120 - hydrogenase maturation protease 122 61.88 0 134859..135527 - 222 39995232 - GSU0121 - nickel-iron hydrogenase, b-type cytochrome subunit 123 63.30 0 135537..137231 - 564 39995233 - GSU0122 - nickel-dependent hydrogenase, large subunit 124 66.21 +1 137241..138326 - 361 39995234 - GSU0123 - nickel-dependent hydrogenase, small subunit 125 69.46 +1 138515..139231 - 238 39995235 - GSU0124 - competence protein F, putative 126 63.15 0 139235..139888 - 217 39995236 - GSU0125 - hypothetical protein 127 62.17 0 139913..140890 - 325 39995237 - GSU0126 - iron-sulfur cluster-binding protein 128 62.07 0 141097..141945 - 282 39995238 - GSU0127 - hypothetical protein 129 67.38 +1 141993..144248 + 751 39995239 priA GSU0128 - primosomal protein n` 130 57.92 0 144291..144839 + 182 39995240 def-1 GSU0129 - polypeptide deformylase 131 64.47 0 144850..145803 + 317 39995241 fmt GSU0130 - methionyl-tRNA formyltransferase 132 59.92 0 145806..146561 + 251 39995242 - GSU0131 - hypothetical protein 133 56.02 0 146719..147225 - 168 39995243 - GSU0132 - hypothetical protein 134 62.30 0 147502..148668 + 388 39995244 - GSU0133 - hypothetical protein 135 64.21 0 148677..149777 - 366 39995245 - GSU0134 - ribonuclease Z 136 62.78 0 149856..150833 - 325 39995246 hemB GSU0135 - delta-aminolevulinic acid dehydratase 137 62.10 0 151068..151505 + 145 39995247 - GSU0136 - hypothetical protein 138 58.66 0 151656..152354 - 232 39995248 - GSU0137 - hypothetical protein 139 59.90 0 152504..154084 + 526 39995249 prfC GSU0138 - peptide chain release factor 3 140 62.11 0 154312..154926 + 204 39995250 - GSU0139 - hypothetical protein 141 65.60 0 155133..155882 + 249 39995251 - GSU0140 - hypothetical protein 142 65.55 0 155890..157056 + 388 39995252 - GSU0141 - hypothetical protein 143 65.07 0 157068..157505 + 145 39995253 pgpA GSU0142 - phosphatidylglycerophosphatase A 144 68.92 +1 157502..158743 + 413 39995254 - GSU0143 - competence/damage-inducible protein CinA 145 62.02 0 158787..160916 + 709 39995255 - GSU0144 - sensory box histidine kinase 146 62.93 0 161049..162065 + 338 39995256 recA GSU0145 - recombinase A 147 63.82 0 162069..163229 + 386 39995257 pilT-1 GSU0146 - twitching motility protein PilT 148 68.54 +1 163258..163737 + 159 39995258 recX GSU0147 - regulatory protein RecX 149 64.88 0 163809..166436 + 875 39995259 alaS GSU0148 - alanyl-tRNA synthetase 150 60.93 0 166459..167574 + 371 39995260 - GSU0149 - sensor histidine kinase/response regulator 151 63.48 0 167708..168586 + 292 39995261 argB GSU0150 - acetylglutamate kinase 152 64.33 0 168667..169866 + 399 39995262 argD GSU0151 - acetylornithine aminotransferase 153 64.04 0 169863..170774 + 303 39995263 argF GSU0152 - ornithine carbamoyltransferase 154 62.82 0 170807..172027 + 406 39995264 argG GSU0153 - argininosuccinate synthase 155 60.59 0 172194..172637 + 147 39995265 - GSU0154 - mutT/nudix family protein 156 63.57 0 172648..173811 + 387 39995266 - GSU0155 - hypothetical protein 157 63.62 0 173833..175209 + 458 39995267 argH GSU0156 - argininosuccinate lyase 158 68.86 +1 175248..176021 + 257 39995268 - GSU0157 - fibronectin type III domain-containing protein 159 63.72 0 176159..177412 + 417 39995269 lysA GSU0158 - diaminopimelate decarboxylase 160 63.69 0 177446..178318 + 290 39995270 dapA GSU0159 - dihydrodipicolinate synthase 161 65.42 0 178340..179140 + 266 39995271 dapB GSU0160 - dihydrodipicolinate reductase 162 45.74 -2 179230..179358 + 42 39995272 - GSU0161 - hypothetical protein 163 62.77 0 179342..180574 + 410 39995273 - GSU0162 - L,L-diaminopimelate aminotransferase 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.