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Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 950 52.87 -1 1067247..1068203 - 318 78222178 - Gmet_0958 - IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase 951 62.69 0 1068551..1069330 + 259 78222179 - Gmet_0959 - type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A 952 63.91 0 1069341..1070936 + 531 78222180 - Gmet_0960 - histidine kinase 953 64.32 0 1070933..1072297 + 454 78222181 - Gmet_0961 - two component, sigma54 specific, Fis family transcriptional regulator 954 57.02 0 1072394..1072963 + 189 78222182 - Gmet_0962 - N-terminal methylation 955 54.97 0 1073161..1073673 + 170 78222183 - Gmet_0963 - N-terminal methylation 956 52.16 -1 1073681..1074073 + 130 78222184 - Gmet_0964 - N-terminal methylation 957 57.31 0 1074085..1074768 + 227 78222185 - Gmet_0965 - N-terminal methylation 958 59.39 0 1074786..1075307 + 173 78222186 - Gmet_0966 - hypothetical protein 959 57.06 0 1075357..1078449 + 1030 78222187 - Gmet_0967 - type IV pilin biogenesis protein, putative 960 53.22 -1 1078449..1078790 + 113 78222188 - Gmet_0968 - hypothetical protein 961 50.53 -1 1078807..1079370 + 187 78222189 - Gmet_0969 - hypothetical protein 962 51.74 -1 1079806..1080006 + 66 78222190 - Gmet_0970 - XRE family transcriptional regulator 963 57.77 0 1080028..1081083 + 351 78222191 - Gmet_0971 - Type IV pilus assembly protein PilM 964 57.59 0 1081077..1081649 + 190 78222192 - Gmet_0972 - fimbrial assembly 965 54.10 0 1081670..1082266 + 198 78222193 - Gmet_0973 - pilus assembly protein, PilO 966 58.47 0 1082250..1082798 + 182 78222194 - Gmet_0974 - putative type IV pilus assembly protein PilP 967 57.29 0 1082821..1085433 + 870 78222195 - Gmet_0975 - type II and III secretion system secretin 968 65.06 0 1085509..1086690 + 393 78222196 - Gmet_0976 - chorismate synthase 969 60.36 0 1086692..1087198 + 168 78222197 - Gmet_0977 - shikimate kinase 970 62.88 0 1087200..1088282 + 360 78222198 - Gmet_0978 - 3-dehydroquinate synthase 971 58.61 0 1088285..1089277 + 330 78222199 - Gmet_0979 - TPR repeat-containing protein 972 59.50 0 1089256..1089618 + 120 78222200 - Gmet_0980 - hypothetical protein 973 57.17 0 1089665..1090117 + 150 78222201 - Gmet_0981 - 3-dehydroquinate dehydratase 974 60.15 0 1090121..1091194 + 357 78222202 - Gmet_0982 - peptidase M24 975 61.25 0 1091291..1091770 + 159 78222203 - Gmet_0983 - biotin carboxyl carrier protein 976 60.18 0 1091847..1093187 + 446 78222204 - Gmet_0984 - biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 977 60.65 0 1093191..1093589 + 132 78222205 - Gmet_0985 - glycine cleavage system H protein 978 60.33 0 1093683..1094519 + 278 78222206 - Gmet_0986 - hypothetical protein 979 59.23 0 1094700..1096919 + 739 78222207 - Gmet_0987 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 980 63.36 0 1096922..1097374 - 150 78222208 - Gmet_0988 - NUDIX hydrolase 981 58.25 0 1097444..1097740 - 98 78222209 - Gmet_0989 - hypothetical protein 982 62.58 0 1098034..1099452 + 472 78222210 - Gmet_0990 - phosphoglucomutase/phosphomannomutase alpha/beta/subunit 983 62.49 0 1099747..1100607 + 286 78222211 - Gmet_0991 - Fe-S cluster assembly protein NifU 984 64.03 0 1100604..1101779 + 391 78222212 - Gmet_0992 - cysteine desulfurase 985 66.94 +1 1101979..1103817 + 612 78222213 - Gmet_0993 - carboxylyase-like protein 986 65.41 +1 1103862..1107290 + 1142 78222214 - Gmet_0994 - SNF2-related:helicase-like:Zinc finger, SWIM-type 987 60.52 0 1107408..1109651 - 747 78222215 - Gmet_0995 - VacJ-like lipoprotein 988 58.62 0 1109967..1111022 + 351 78222216 - Gmet_0996 - ABC transporter, substrate-binding protein, aliphatic sulphonates 989 60.69 0 1111009..1111845 + 278 78222217 - Gmet_0997 - ABC transporter-related protein 990 60.54 0 1111835..1112617 + 260 78222218 - Gmet_0998 - binding-protein dependent transport system inner membrane protein 991 59.13 0 1112645..1113679 - 344 78222219 - Gmet_0999 - 4Fe-4S ferredoxin, iron-sulfur binding protein 992 43.98 -2 1113779..1114492 - 237 78222220 - Gmet_1000 - haloacid dehalogenase-like hydrolase 993 41.10 -2 1114587..1115294 - 235 78222221 - Gmet_1001 - hypothetical protein 994 53.59 -1 1115829..1117082 + 417 78222222 - Gmet_1002 - IS204/IS1001/IS1096/IS1165 transposase 995 42.39 -2 1117026..1118195 - 389 78222223 - Gmet_1003 - hypothetical protein 996 65.72 +1 1118547..1119389 + 280 78222224 - Gmet_1004 - formate dehydrogenase formation protein FdhE, putative 997 58.68 0 1119656..1121470 + 604 78222225 - Gmet_1005 - multi-sensor signal transduction histidine kinase 998 61.72 0 1121480..1122490 - 336 78222226 - Gmet_1006 - radical SAM family protein 999 64.89 0 1122508..1122900 - 130 78222227 - Gmet_1007 - TraR/DksA family transcriptional regulator 1000 62.31 0 1122950..1123660 + 236 78222228 - Gmet_1008 - hypothetical protein 1001 63.47 0 1123657..1124187 - 176 78222229 - Gmet_1009 - PBP family phospholipid-binding protein 1002 53.90 0 1124642..1125103 + 153 78222230 - Gmet_1010 - alkylhydroperoxidase AhpD core 1003 51.89 -1 1125302..1125592 + 96 78222231 - Gmet_1011 - antibiotic biosynthesis monooxygenase 1004 57.09 0 1125667..1126209 + 180 78222232 - Gmet_1012 - hemerythrin HHE cation binding region 1005 56.47 0 1126401..1126802 + 133 78222233 - Gmet_1013 - rhodanese-like protein 1006 57.51 0 1126874..1128304 + 476 78222234 - Gmet_1014 - peptidase S1C, Do 1007 54.18 0 1128376..1129632 + 418 78222235 - Gmet_1015 - hypothetical protein 1008 65.21 0 1129707..1132520 + 937 78222236 - Gmet_1016 - aconitate hydratase 1009 50.66 -1 1132673..1133278 + 201 78222237 - Gmet_1017 - hypothetical protein 1010 59.26 0 1133326..1133622 + 98 78222238 - Gmet_1018 - Rieske (2Fe-2S) region 1011 65.32 0 1133639..1134529 + 296 78222239 - Gmet_1019 - hypothetical protein 1012 65.12 0 1134536..1138150 + 1204 78222240 - Gmet_1020 - nitrate oxidoreductase alpha subunit 1013 63.44 0 1138201..1139688 + 495 78222241 - Gmet_1021 - respiratory nitrate reductase beta subunit 1014 58.75 0 1139699..1140481 + 260 78222242 - Gmet_1022 - respiratory nitrate reductase gamma subunit 1015 57.11 0 1141029..1141436 + 135 78222243 - Gmet_1024 - hypothetical protein 1016 56.75 0 1141478..1141840 + 120 78222244 - Gmet_1025 - hypothetical protein 1017 56.44 0 1141939..1142613 + 224 78222245 - Gmet_1026 - two component transcriptional regulator 1018 56.49 0 1142610..1144043 + 477 78222246 - Gmet_1027 - histidine kinase 1019 56.67 0 1144774..1145223 + 149 78222247 - Gmet_1029 - hypothetical protein 1020 57.36 0 1145481..1146329 + 282 78222248 - Gmet_1030 - metallo-beta-lactamase family protein 1021 53.59 -1 1146339..1147034 - 231 78222249 - Gmet_1031 - hypothetical protein 1022 57.24 0 1147230..1148735 + 501 78222250 - Gmet_1032 - Zinc finger/thioredoxin putative 1023 53.33 -1 1148853..1149077 - 74 78222251 - Gmet_1033 - 4Fe-4S ferredoxin, iron-sulfur binding protein 1024 56.79 0 1149287..1150552 + 421 78222252 - Gmet_1034 - acetate kinase 1025 63.77 0 1150703..1151704 - 333 78222253 - Gmet_1035 - phosphotransacetylase 1026 67.48 +1 1151824..1152315 - 163 78222254 - Gmet_1036 - molybdopterin adenylyltransferase 1027 66.46 +1 1152312..1152794 - 160 78222255 - Gmet_1037 - GTP cyclohydrolase subunit MoaC 1028 67.16 +1 1152809..1154026 - 405 78222256 - Gmet_1038 - molybdopterin molybdochelatase 1029 66.26 +1 1153981..1154724 - 247 78222257 - Gmet_1039 - ABC transporter-related protein 1030 65.65 +1 1154731..1155417 - 228 78222258 - Gmet_1040 - binding-protein dependent transport system inner membrane protein 1031 60.37 0 1155472..1156281 - 269 78222259 - Gmet_1041 - extracellular solute-binding protein 1032 60.32 0 1156444..1157688 - 414 78222260 - Gmet_1042 - phosphate-selective porin O and P 1033 64.77 0 1158038..1158880 - 280 78222261 - Gmet_1043 - UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB 1034 60.00 0 1158882..1159106 - 74 78222262 - Gmet_1044 - thiamine S 1035 64.70 0 1159181..1160911 - 576 78222263 - Gmet_1045 - aldehyde ferredoxin oxidoreductase 1036 65.21 0 1161195..1162358 - 387 78222264 - Gmet_1046 - Iron-containing alcohol dehydrogenase 1037 58.22 0 1162870..1163094 + 74 78222265 - Gmet_1047 - CopG-like DNA-binding protein 1038 50.49 -1 1163682..1165523 - 613 78222266 - Gmet_1048 - hypothetical protein 1039 48.37 -1 1165608..1166558 - 316 78222267 - Gmet_1049 - hypothetical protein 1040 58.33 0 1166724..1167191 - 155 78222268 - Gmet_1050 - hypothetical protein 1041 55.37 0 1167261..1167623 - 120 78222269 - Gmet_1051 - hypothetical protein 1042 48.04 -1 1167620..1167925 - 101 78222270 - Gmet_1052 - hypothetical protein 1043 65.01 0 1168240..1169388 + 382 78222271 - Gmet_1053 - Iron-containing alcohol dehydrogenase 1044 60.22 0 1169529..1171187 + 552 78222272 - Gmet_1054 - GAF sensor signal transduction histidine kinase 1045 64.24 0 1171210..1172736 + 508 78222273 - Gmet_1055 - two component, sigma54 specific, Fis family transcriptional regulator 1046 56.68 0 1172992..1173552 - 186 78222274 - Gmet_1056 - hypothetical protein 1047 65.18 0 1173596..1175617 - 673 78222275 - Gmet_1057 - histidine kinase 1048 65.23 0 1175618..1177006 - 462 78222276 - Gmet_1058 - two component, sigma54 specific, Fis family transcriptional regulator 1049 63.70 0 1177284..1180316 + 1010 78222277 - Gmet_1059 - formate dehydrogenase alpha subunit 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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