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Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 513 61.35 0 557767..558819 - 350 78221741 - Gmet_0520 - arsenical-resistance protein ACR3 514 60.05 0 558812..559234 - 140 78221742 - Gmet_0521 - protein tyrosine phosphatase 515 64.33 0 559290..559631 - 113 78221743 - Gmet_0522 - ArsR family transcriptional regulator 516 67.58 +1 559682..560989 - 435 78221744 - Gmet_0523 - ABC transporter-related protein 517 65.63 +1 560999..562738 - 579 78221745 - Gmet_0524 - binding-protein dependent transport system inner membrane protein 518 65.11 0 562814..563584 - 256 78221746 - Gmet_0525 - PAP2 family protein 519 61.72 0 563587..565488 - 633 78221747 - Gmet_0526 - sulfatase 520 64.09 0 565591..567024 - 477 78221748 - Gmet_0527 - heavy metal sensor signal transduction histidine kinase 521 65.48 +1 567005..567676 - 223 78221749 - Gmet_0528 - two component heavy metal response transcriptional regulator 522 58.78 0 567810..569444 - 544 78221750 - Gmet_0529 - methyl-accepting chemotaxis sensory transducer 523 56.53 0 569585..570541 - 318 78221751 - Gmet_0530 - LysR family transcriptional regulator 524 58.74 0 570801..572138 + 445 78221752 - Gmet_0531 - rhodanese-like protein 525 56.97 0 572210..573457 + 415 78221753 - Gmet_0532 - phosphate-selective porin O and P 526 58.10 0 573496..573810 + 104 78221754 - Gmet_0533 - hypothetical protein 527 59.69 0 573924..574898 + 324 78221755 - Gmet_0534 - cytochrome c family protein 528 57.63 0 574956..575276 + 106 78221756 - Gmet_0535 - hypothetical protein 529 62.76 0 575370..577265 + 631 78221757 - Gmet_0536 - cytochrome c family protein 530 66.99 +1 577213..578457 + 414 78221758 - Gmet_0537 - cytochrome c family protein 531 63.38 0 578412..578807 + 131 78221759 - Gmet_0538 - Rieske (2Fe-2S) region 532 63.77 0 578804..579424 + 206 78221760 - Gmet_0539 - cytochrome b/b6-like 533 64.78 0 579122..579970 - 282 78221761 - Gmet_0540 - hypothetical protein 534 63.48 0 580097..580660 + 187 78221762 - Gmet_0541 - hypothetical protein 535 61.42 0 580657..581247 - 196 78221763 - Gmet_0542 - hypothetical protein 536 57.73 0 581260..581550 - 96 78221764 - Gmet_0543 - cytochrome c, putative 537 63.64 0 581669..582460 - 263 78221765 - Gmet_0544 - CoA enzyme activase 538 61.35 0 582467..583444 - 325 78221766 - Gmet_0545 - hypothetical protein 539 56.73 0 583449..583790 - 113 78221767 - Gmet_0546 - hypothetical protein 540 66.19 +1 583981..584811 + 276 78221768 - Gmet_0547 - glutamate racemase 541 63.61 0 584817..585404 + 195 78221769 - Gmet_0548 - hypothetical protein 542 68.24 +1 585401..587815 + 804 78221770 - Gmet_0549 - methionine synthase (B12-dependent) 543 58.81 0 587916..588335 + 139 78221771 - Gmet_0550 - hypothetical protein 544 63.88 0 588332..589192 + 286 78221772 - Gmet_0551 - transketolase subunit A 545 64.97 0 589383..590327 + 314 78221773 - Gmet_0552 - transketolase subunit B 546 60.94 0 590335..590910 + 191 78221774 - Gmet_0553 - hypothetical protein 547 59.20 0 591018..592517 + 499 78221775 - Gmet_0554 - histidine kinase 548 59.32 0 592626..593999 + 457 78221776 - Gmet_0555 - two component, sigma54 specific, Fis family transcriptional regulator 549 62.22 0 594359..597058 + 899 78221777 - Gmet_0556 - NHL repeat-containing protein 550 54.57 0 597124..597966 + 280 78221778 - Gmet_0557 - cytochrome c family protein 551 63.52 0 597996..601106 + 1036 78221779 - Gmet_0558 - cytochrome c family protein 552 64.07 0 601354..603852 + 832 78221780 - Gmet_0559 - parallel beta-helix repeat-containing protein 553 65.94 +1 603849..604538 + 229 78221781 - Gmet_0560 - hypothetical protein 554 60.78 0 604598..605158 + 186 78221782 - Gmet_0561 - putative lipoprotein 555 62.54 0 605166..606110 + 314 78221783 - Gmet_0562 - hypothetical protein 556 64.67 0 606130..608031 + 633 78221784 - Gmet_0563 - permease 557 58.57 0 608095..608415 + 106 78221785 - Gmet_0564 - hypothetical protein 558 66.03 +1 608602..608916 + 104 78221786 - Gmet_0565 - hypothetical protein 559 66.17 +1 608906..609904 + 332 78221787 - Gmet_0566 - radical SAM family protein 560 66.90 +1 609941..610810 + 289 78221788 - Gmet_0567 - hypothetical protein 561 62.14 0 610848..611753 + 301 78221789 - Gmet_0568 - hypothetical protein 562 66.85 +1 611904..612458 + 184 78221790 - Gmet_0569 - TPR repeat-containing protein 563 68.93 +1 612458..613519 + 353 78221791 - Gmet_0570 - hypothetical protein 564 61.76 0 613780..619326 + 1848 78221792 - Gmet_0571 - cytochrome c family protein 565 55.93 0 619357..620679 + 440 78221793 - Gmet_0572 - hypothetical protein 566 52.09 -1 620728..621564 + 278 78221794 - Gmet_0573 - cytochrome c assembly protein 567 49.03 -1 621561..622076 + 171 78221795 - Gmet_0574 - hypothetical protein 568 63.74 0 622606..625989 + 1127 78221796 - Gmet_0575 - cytochrome c family protein 569 61.82 0 626056..629910 + 1284 78221797 - Gmet_0576 - hypothetical protein 570 61.47 0 629945..630733 + 262 78221798 - Gmet_0577 - parallel beta-helix repeat-containing protein 571 61.05 0 630833..632149 + 438 78221799 - Gmet_0578 - hypothetical protein 572 59.75 0 632149..632958 + 269 78221800 - Gmet_0579 - cytochrome c assembly protein 573 62.03 0 633445..636054 + 869 78221801 - Gmet_0580 - high-molecular-weight cytochrome c 574 62.08 0 636065..644803 + 2912 78221802 - Gmet_0581 - high-molecular-weight cytochrome c 575 59.71 0 645133..646167 + 344 78221803 - Gmet_0582 - ankyrin 576 62.41 0 646169..648682 + 837 78221804 - Gmet_0583 - spermine synthase 577 63.68 0 648685..650325 + 546 78221805 - Gmet_0584 - hypothetical protein 578 64.62 0 650373..651593 + 406 78221806 - Gmet_0585 - glycosyl transferase family protein 579 65.62 +1 651593..652645 + 350 78221807 - Gmet_0586 - radical SAM family protein 580 65.25 0 652645..653775 + 376 78221808 - Gmet_0587 - radical SAM family protein 581 63.08 0 653772..655613 + 613 78221809 - Gmet_0588 - TPR repeat-containing protein 582 56.68 0 655692..656372 + 226 78221810 - Gmet_0589 - glycosyl transferase family protein 583 61.73 0 656467..657216 + 249 78221811 - Gmet_0590 - hypothetical protein 584 65.27 0 657213..659216 + 667 78221812 - Gmet_0591 - hypothetical protein 585 61.74 0 659273..660592 + 439 78221813 - Gmet_0592 - hypothetical protein 586 62.62 0 660621..661139 + 172 78221814 - Gmet_0593 - hypothetical protein 587 59.90 0 661203..662030 + 275 78221815 - Gmet_0594 - cytochrome c assembly protein 588 64.02 0 662073..663320 + 415 78221816 - Gmet_0595 - hypothetical protein 589 56.67 0 663322..663681 + 119 78221817 - Gmet_0596 - hypothetical protein 590 60.09 0 663892..665397 + 501 78221818 - Gmet_0597 - radical SAM family protein 591 63.16 0 665619..668039 + 806 78221819 - Gmet_0598 - PKD 592 63.65 0 665889..669140 - 1083 78221820 - Gmet_0599 - hypothetical protein 593 61.01 0 669424..671562 + 712 78221821 - Gmet_0600 - PKD 594 59.43 0 671608..672657 + 349 78221822 - Gmet_0601 - hypothetical protein 595 62.72 0 672920..674008 + 362 78221823 - Gmet_0602 - 3-isopropylmalate dehydrogenase 596 63.31 0 674045..675145 + 366 78221824 - Gmet_0603 - aspartate-semialdehyde dehydrogenase 597 61.08 0 675149..676168 + 339 78221825 - Gmet_0604 - aspartate semialdehyde dehydrogenase 598 60.83 0 676216..676986 + 256 78221826 truA Gmet_0605 - tRNA pseudouridine synthase A 599 53.94 0 677088..677519 + 143 78221827 rplM Gmet_0606 - 50S ribosomal protein L13 600 58.27 0 677555..677947 + 130 78221828 rpsI Gmet_0607 - 30S ribosomal protein S9 601 59.75 0 678076..679116 + 346 78221829 argC Gmet_0608 - N-acetyl-gamma-glutamyl-phosphate reductase 602 61.20 0 679126..680937 + 603 78221830 - Gmet_0609 - radical SAM family protein 603 58.86 0 682481..683671 + 396 78221831 - Gmet_0611 - elongation factor Tu 604 44.00 -2 683739..683888 + 49 78221832 rpmG Gmet_0612 - 50S ribosomal protein L33 605 51.61 -1 684038..684223 + 61 78221833 secE Gmet_0613 - preprotein translocase subunit SecE 606 48.11 -1 684239..684766 + 175 78221834 - Gmet_0614 - transcription antitermination protein nusG 607 55.08 0 684831..685253 + 140 78221835 rplK Gmet_0615 - 50S ribosomal protein L11 608 58.87 0 685276..685980 + 234 78221836 rplA Gmet_0616 - 50S ribosomal protein L1 609 52.57 -1 686156..686680 + 174 78221837 rplJ Gmet_0617 - 50S ribosomal protein L10 610 56.77 0 686730..687113 + 127 78221838 rplL Gmet_0618 - 50S ribosomal protein L7/L12 611 56.43 0 687276..691388 + 1370 78221839 rpoB Gmet_0619 - DNA-directed RNA polymerase subunit beta 612 56.88 0 691466..695644 + 1392 78221840 - Gmet_0620 - DNA-directed RNA polymerase, subunit beta-prime 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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