version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 385 58.28 0 434308..434748 + 146 78221613 - Gmet_0392 - hypothetical protein 386 58.47 0 434854..435390 + 178 78221614 - Gmet_0393 - colicin V production protein 387 62.31 0 435368..437134 + 588 78221615 - Gmet_0394 - DNA primase 388 58.79 0 437164..438903 + 579 78221616 - Gmet_0395 - RNA polymerase sigma factor RpoD-like 389 62.35 0 438987..439472 + 161 78221617 - Gmet_0396 - hypothetical protein 390 64.17 0 439483..440322 + 279 78221618 - Gmet_0397 - silent information regulator protein Sir2 391 62.74 0 440319..441488 + 389 78221619 - Gmet_0398 - putative RNA methylase:THUMP 392 61.13 0 441805..442923 + 372 78221620 - Gmet_0399 - hypothetical protein 393 61.62 0 442976..443689 + 237 78221621 - Gmet_0400 - hypothetical protein 394 58.74 0 444201..444629 + 142 78221622 - Gmet_0401 - hypothetical protein 395 52.66 -1 444647..445003 + 118 78221623 - Gmet_0402 - hypothetical protein 396 58.07 0 445315..445791 + 158 78221624 - Gmet_0403 - cell division protein MraZ 397 62.53 0 445791..446732 + 313 78221625 - Gmet_0404 - methyltransferase 398 58.33 0 446750..447085 + 111 78221626 - Gmet_0405 - cell division protein, FtsL -like 399 60.33 0 447082..449055 + 657 78221627 - Gmet_0406 - penicillin-binding protein, transpeptidase 400 61.39 0 449113..450648 + 511 78221628 - Gmet_0407 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 401 63.13 0 450650..452062 + 470 78221629 - Gmet_0408 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 402 58.68 0 452062..453138 + 358 78221630 - Gmet_0409 - phospho-N-acetylmuramoyl-pentapeptide-transferase 403 64.53 0 453140..454498 + 452 78221631 - Gmet_0410 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 404 59.49 0 454495..455622 + 375 78221632 - Gmet_0411 - cell cycle protein 405 61.28 0 455619..456713 + 364 78221633 - Gmet_0412 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 406 63.49 0 456716..458101 + 461 78221634 - Gmet_0413 - UDP-N-acetylmuramate--L-alanine ligase 407 63.46 0 458106..459008 + 300 78221635 - Gmet_0414 - UDP-N-acetylmuramate dehydrogenase 408 61.57 0 459049..460932 + 627 78221636 - Gmet_0415 - D-alanine--D-alanine ligase 409 63.83 0 460954..462189 + 411 78221637 - Gmet_0416 - cell division protein FtsA 410 64.59 0 462277..463431 + 384 78221638 - Gmet_0417 - cell division protein FtsZ 411 64.40 0 463602..465275 + 557 78221639 - Gmet_0418 - radical SAM family protein 412 61.38 0 465281..467473 - 730 78221640 - Gmet_0419 - Terpene synthase:squalene cyclase 413 56.64 0 467520..468167 - 215 78221641 - Gmet_0420 - TetR family transcriptional regulator 414 65.43 +1 468309..469034 - 241 78221642 - Gmet_0421 - transport-associated protein 415 64.87 0 469092..469871 - 259 78221643 - Gmet_0422 - Short-chain dehydrogenase/reductase SDR 416 63.72 0 470123..471004 + 293 78221644 - Gmet_0423 - radical SAM family protein 417 57.04 0 471097..471366 + 89 78221645 - Gmet_0424 - hypothetical protein 418 54.51 0 471515..471769 + 84 78221646 - Gmet_0425 - hypothetical protein 419 64.08 0 472019..474103 + 694 78221647 flhA Gmet_0426 - flagellar biosynthesis protein FlhA 420 63.94 0 474093..475451 + 452 78221648 - Gmet_0427 - GTP-binding signal recognition particle 421 62.93 0 475448..476383 + 311 78221649 - Gmet_0428 - NifH/frxC:cobyrinic acid a,c-diamide synthase 422 61.09 0 476380..477132 + 250 78221650 - Gmet_0429 - sigma 28 (flagella/sporulation) 423 63.92 0 477137..477865 + 242 78221651 - Gmet_0430 - hypothetical protein 424 61.85 0 477948..478736 + 262 78221652 flgG Gmet_0431 - flagellar basal body rod protein FlgG 425 65.82 +1 478783..479493 + 236 78221653 - Gmet_0432 - flageller protein FlgA 426 63.00 0 479548..480228 + 226 78221654 - Gmet_0433 - flagellar L-ring protein 427 65.57 +1 480303..481400 + 365 78221655 flgI Gmet_0434 - flagellar basal body P-ring protein 428 61.48 0 481561..481926 + 121 78221656 - Gmet_0435 - flagellar protein FlgJ-like protein 429 63.95 0 481923..482216 + 97 78221657 - Gmet_0436 - anti-sigma-28 factor, FlgM 430 62.25 0 482234..482731 + 165 78221658 - Gmet_0437 - FlgN 431 57.81 0 482735..484168 + 477 78221659 - Gmet_0438 - flagellar hook-associated protein 432 54.80 0 484210..485094 + 294 78221660 - Gmet_0439 - flagellin-like 433 56.54 0 485123..485359 + 78 78221661 - Gmet_0440 - carbon storage regulator, CsrA / carbon storage regulator, CsrA 434 53.90 0 485366..485827 + 153 78221662 - Gmet_0441 - flagellar assembly protein FliW 435 59.26 0 485967..486911 + 314 78221663 - Gmet_0442 - flagellin-like 436 55.31 0 487069..488292 + 407 78221664 - Gmet_0443 - IS204/IS1001/IS1096/IS1165 transposase 437 47.61 -2 488384..489847 + 487 78221665 - Gmet_0444 - flagellar hook-associated protein 2-like 438 45.63 -2 489861..490283 + 140 78221666 - Gmet_0445 - flagellar protein FliS 439 51.08 -1 490292..490708 + 138 78221667 - Gmet_0446 - hypothetical protein 440 53.17 -1 490796..493315 - 839 78221668 - Gmet_0447 - TPR repeat-containing protein 441 58.54 0 493334..495313 - 659 78221669 - Gmet_0448 - glycoside hydrolase family protein 442 56.38 0 495313..496527 - 404 78221670 - Gmet_0449 - putative glycolate oxidase 443 57.21 0 496574..497398 - 274 78221671 - Gmet_0450 - Short-chain dehydrogenase/reductase SDR 444 54.01 0 497403..498824 - 473 78221672 - Gmet_0451 - glucuronate isomerase 445 51.41 -1 498874..499758 - 294 78221673 - Gmet_0452 - hypothetical protein 446 50.44 -1 499769..500686 - 305 78221674 - Gmet_0453 - hypothetical protein 447 54.43 0 500679..502460 - 593 78221675 - Gmet_0454 - acylneuraminate cytidylyltransferase 448 57.84 0 502453..503313 - 286 78221676 - Gmet_0455 - N-acetylneuraminate synthase 449 47.89 -2 503535..505553 - 672 78221677 - Gmet_0456 - 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like 450 63.16 0 505594..506790 - 398 78221678 - Gmet_0457 - DegT/DnrJ/EryC1/StrS aminotransferase 451 56.95 0 506787..507815 - 342 78221679 - Gmet_0458 - polysaccharide biosynthesis protein CapD 452 61.54 0 508186..508965 + 259 78221680 - Gmet_0459 - hypothetical protein 453 60.07 0 509050..509853 - 267 78221681 - Gmet_0460 - OmpA/MotB 454 58.69 0 509860..510624 - 254 78221682 - Gmet_0461 - MotA/TolQ/ExbB proton channel 455 53.41 -1 510676..510939 - 87 78221683 - Gmet_0462 - flagellar protein 456 55.73 0 511206..511580 + 124 78221684 - Gmet_0463 - flagellar protein FlaG protein 457 59.06 0 511771..512625 - 284 78221685 - Gmet_0464 - metal dependent phosphohydrolase 458 62.93 0 512782..513396 + 204 78221686 - Gmet_0465 - GTPase EngB 459 66.67 +1 513757..514275 + 172 78221687 - Gmet_0466 - adenosylcobinamide kinase 460 65.82 +1 514370..515431 + 353 78221688 - Gmet_0467 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 461 65.18 0 515487..516293 + 268 78221689 - Gmet_0468 - cobalamin-5'-phosphate synthase 462 64.03 0 516304..516909 + 201 78221690 - Gmet_0469 - phosphoglycerate/bisphosphoglycerate mutase 463 66.02 +1 516914..518302 + 462 78221691 - Gmet_0470 - cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) 464 65.60 +1 518299..519606 + 435 78221692 - Gmet_0471 - thiamine biosynthesis protein ThiC 465 67.26 +1 519822..520499 + 225 161723103 - Gmet_0472 - cobalt transport protein CbiM 466 61.70 0 520496..520777 + 93 78221694 - Gmet_0473 - cobalamin biosynthesis protein CbiM 467 67.20 +1 520780..521532 + 250 78221695 - Gmet_0474 - cobalt ABC transporter CbiQ, permease subunit 468 65.01 0 521523..522365 + 280 78221696 - Gmet_0475 - cobalt transport protein ATP-binding subunit 469 62.41 0 522445..522867 + 140 78221697 - Gmet_0476 - cobalamin (vitamin B12) biosynthesis CbiX protein 470 68.37 +1 522867..523511 + 214 78221698 - Gmet_0477 - precorrin-8X methylmutase 471 66.85 +1 523536..524645 + 369 78221699 - Gmet_0478 - cobalamin (vitamin B12) biosynthesis CbiD protein 472 57.55 0 524682..524999 + 105 78221700 - Gmet_0479 - DNA polymerase, beta-like region 473 56.98 0 524986..525336 + 116 78221701 - Gmet_0480 - hypothetical protein 474 63.63 0 525353..526570 + 405 78221702 - Gmet_0481 - precorrin-6Y C5,15-methyltransferase (decarboxylating) 475 64.11 0 526567..527271 + 234 78221703 - Gmet_0482 - precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase 476 66.41 +1 527281..528057 + 258 78221704 - Gmet_0483 - precorrin-4 C11-methyltransferase 477 66.76 +1 528103..529158 + 351 78221705 - Gmet_0484 - cobalamin (vitamin B12) biosynthesis CbiG protein 478 66.67 +1 529268..531661 + 797 78221706 - Gmet_0485 - cobyric acid synthase CobQ:precorrin-3B C17-methyltransferase region 479 68.03 +1 531658..532614 + 318 78221707 - Gmet_0486 - adenosylcobinamide-phosphate synthase 480 64.25 0 532747..533946 + 399 78221708 - Gmet_0487 - L-threonine O-3-phosphate decarboxylase 481 52.87 -1 533869..534825 - 318 78221709 - Gmet_0488 - IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase 482 66.15 +1 535134..536492 - 452 78221710 - Gmet_0489 - hypothetical protein 483 66.45 +1 536527..536991 - 154 78221711 - Gmet_0490 - hypothetical protein 484 64.89 0 537175..538131 + 318 78221712 - Gmet_0491 - periplasmic solute binding protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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