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Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3167 61.43 0 3604335..3604754 - 139 78224395 - Gmet_3204 - TraR/DksA family transcriptional regulator 3168 62.93 0 3604842..3606179 - 445 78224396 - Gmet_3205 - hypothetical protein 3169 58.23 0 3606213..3606698 - 161 78224397 - Gmet_3206 - nucleotide-binding protein 3170 61.73 0 3606730..3607458 - 242 78224398 - Gmet_3207 - Outer membrane lipoprotein carrier protein LolA 3171 59.58 0 3607551..3608369 - 272 78224399 - Gmet_3208 - Outer membrane lipoprotein carrier protein LolA 3172 62.37 0 3608388..3608876 - 162 78224400 - Gmet_3209 - CheD, stimulates methylation of MCP proteins 3173 58.21 0 3608873..3609487 - 204 78224401 - Gmet_3210 - CheC, inhibitor of MCP methylation 3174 59.89 0 3609549..3609917 - 122 78224402 - Gmet_3211 - response regulator receiver domain-containing protein 3175 57.65 0 3610020..3610895 - 291 78224403 - Gmet_3212 - MCP methyltransferase, CheR-type 3176 64.55 0 3610982..3611971 - 329 78224404 - Gmet_3213 - thiamine-monophosphate kinase 3177 63.07 0 3611968..3614439 - 823 78224405 - Gmet_3214 - Lon-A peptidase 3178 60.71 0 3614439..3614891 - 150 78224406 - Gmet_3215 - heat shock protein Hsp20 3179 60.09 0 3615370..3617301 + 643 78224407 - Gmet_3216 - TPR repeat-containing protein 3180 54.84 0 3617404..3617589 - 61 78224408 - Gmet_3217 - twin-arginine translocation protein TatA/E 3181 59.60 0 3617851..3618303 + 150 78224409 - Gmet_3218 - response regulator receiver domain-containing protein 3182 63.11 0 3618425..3620422 + 665 78224410 - Gmet_3219 - excinuclease ABC subunit B 3183 64.53 0 3620439..3621140 + 233 78224411 - Gmet_3220 - response regulator receiver domain-containing protein 3184 66.35 +1 3621151..3622401 + 416 78224412 - Gmet_3221 - major facilitator transporter 3185 63.21 0 3622483..3623148 + 221 78224413 - Gmet_3222 - nitrite and sulphite reductase 4Fe-4S region 3186 68.28 +1 3623160..3626387 - 1075 78224414 - Gmet_3223 - UvrD/REP helicase 3187 65.58 +1 3626592..3627977 + 461 78224415 - Gmet_3224 - hypothetical protein 3188 61.85 0 3628008..3629708 + 566 78224416 - Gmet_3225 - peptidoglycan-binding LysM 3189 61.33 0 3629874..3630566 - 230 78224417 - Gmet_3226 - peptidoglycan-binding LysM 3190 62.45 0 3630568..3633558 - 996 78224418 - Gmet_3227 - hypothetical protein 3191 63.25 0 3633756..3635600 + 614 78224419 - Gmet_3228 - excinuclease ABC subunit C 3192 58.87 0 3635640..3636152 - 170 78224420 - Gmet_3229 - thioredoxin-related protein 3193 59.70 0 3636182..3636511 - 109 78224421 - Gmet_3230 - thioredoxin 3194 64.15 0 3636672..3637346 + 224 78224422 - Gmet_3231 - precorrin-2 dehydrogenase 3195 58.46 0 3637343..3638158 + 271 78224423 - Gmet_3232 - cytochrome c assembly protein 3196 61.84 0 3638175..3639479 + 434 78224424 hemA Gmet_3233 - glutamyl-tRNA reductase 3197 66.77 +1 3639530..3640486 + 318 78224425 - Gmet_3234 - porphobilinogen deaminase 3198 66.73 +1 3640496..3642037 + 513 78224426 - Gmet_3235 - uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase 3199 67.33 +1 3642090..3642848 + 252 78224427 - Gmet_3236 - TatD-related deoxyribonuclease:amidohydrolase 2 3200 63.80 0 3643065..3643832 + 255 78224428 - Gmet_3237 - UBA/THIF-type NAD/FAD binding fold 3201 58.03 0 3643911..3644408 + 165 78224429 - Gmet_3238 - rubrerythrin 3202 64.91 0 3644496..3646550 - 684 78224430 hppA Gmet_3239 - membrane-bound proton-translocating pyrophosphatase 3203 60.40 0 3646784..3647230 + 148 78224431 - Gmet_3240 - ferric uptake regulator family protein 3204 53.15 -1 3647255..3647365 + 36 78224432 - Gmet_3241 - hypothetical protein 3205 55.89 0 3647381..3647872 + 163 78224433 - Gmet_3242 - rubrerythrin 3206 59.84 0 3647981..3649195 + 404 78224434 - Gmet_3243 - Beta-lactamase-like:flavodoxin/nitric oxide synthase 3207 66.43 +1 3649202..3650464 + 420 78224435 - Gmet_3244 - hypothetical protein 3208 63.55 0 3650590..3651969 + 459 78224436 - Gmet_3245 - FAD linked oxidase-like 3209 66.35 +1 3652167..3653432 + 421 78224437 - Gmet_3246 - hypothetical protein 3210 57.27 0 3653676..3654239 + 187 78224438 - Gmet_3247 - XRE family transcriptional regulator 3211 63.77 0 3654378..3656102 + 574 78224439 - Gmet_3248 - carboxyl transferase 3212 62.88 0 3656275..3659154 + 959 78224440 - Gmet_3249 - biotin/lipoyl attachment 3213 58.33 0 3659261..3659896 + 211 78224441 - Gmet_3250 - thymidylate kinase 3214 63.35 0 3659989..3661647 + 552 78224442 - Gmet_3251 - methylmalonyl-CoA mutase 3215 45.50 -2 3661619..3662062 + 147 78224443 - Gmet_3252 - hypothetical protein 3216 62.47 0 3662111..3662515 + 134 78224444 - Gmet_3253 - methylmalonyl-CoA epimerase 3217 59.69 0 3663042..3664460 + 472 78224445 - Gmet_3254 - LamB porin family protein, putative 3218 52.48 -1 3664590..3664871 + 93 78224446 - Gmet_3255 - hypothetical protein 3219 62.75 0 3665060..3666592 + 510 78224447 - Gmet_3256 - hypothetical protein 3220 57.89 0 3666618..3667016 + 132 78224448 - Gmet_3257 - DNA polymerase, beta-like region 3221 51.90 -1 3667009..3667428 + 139 78224449 - Gmet_3258 - hypothetical protein 3222 63.37 0 3667602..3668906 + 434 78224450 hisZ Gmet_3259 - ATP phosphoribosyltransferase regulatory subunit 3223 60.87 0 3668920..3670212 + 430 78224451 - Gmet_3260 - adenylosuccinate synthetase 3224 59.25 0 3670633..3671427 - 264 78224452 - Gmet_3261 - hypothetical protein 3225 61.14 0 3671554..3672150 - 198 78224453 - Gmet_3262 - lytic transglycosylase, catalytic 3226 58.14 0 3672337..3673731 - 464 78224454 - Gmet_3263 - two component, sigma54 specific, Fis family transcriptional regulator 3227 47.04 -2 3673828..3674148 + 106 78224455 - Gmet_3264 - hypothetical protein 3228 58.79 0 3674187..3674681 + 164 78224456 - Gmet_3265 - CheW protein 3229 62.55 0 3674719..3676542 + 607 78224457 - Gmet_3266 - CheA signal transduction histidine kinase 3230 54.08 0 3676587..3677420 + 277 78224458 - Gmet_3267 - MCP methyltransferase, CheR-type 3231 61.41 0 3677438..3678331 + 297 78224459 - Gmet_3268 - metal dependent phosphohydrolase 3232 64.06 0 3678338..3679411 + 357 78224460 - Gmet_3269 - response regulator receiver (CheY-like) modulated CheB methylesterase 3233 65.08 0 3679408..3679722 - 104 78224461 - Gmet_3270 - hypothetical protein 3234 66.48 +1 3679823..3680914 + 363 78224462 - Gmet_3271 - MCP methyltransferase, CheR-type 3235 62.49 0 3680901..3681881 - 326 78224463 - Gmet_3272 - 3-oxoacyl-[acyl-carrier-protein] synthase III 3236 61.68 0 3681999..3682319 - 106 78224464 - Gmet_3273 - hypothetical protein 3237 65.12 0 3682438..3683085 + 215 78224465 - Gmet_3274 - HEAT repeat-containing PBS lyase 3238 63.55 0 3683108..3684454 - 448 78224466 - Gmet_3275 - metal dependent phosphohydrolase 3239 66.31 +1 3684447..3686120 - 557 78224467 - Gmet_3276 - HEAT repeat-containing PBS lyase 3240 67.11 +1 3686289..3687638 + 449 78224468 - Gmet_3277 - DNA repair protein RadA 3241 58.82 0 3687740..3688096 + 118 78224469 - Gmet_3278 - TraR/DksA family transcriptional regulator 3242 59.17 0 3688154..3689980 + 608 78224470 - Gmet_3279 - GAF sensor signal transduction histidine kinase 3243 46.95 -2 3690128..3690619 - 163 78224471 - Gmet_3280 - hypothetical protein 3244 58.49 0 3690629..3691423 - 264 78224472 - Gmet_3281 - transposase/IS protein 3245 58.09 0 3691420..3692445 - 341 78224473 - Gmet_3282 - integrase catalytic subunit 3246 58.58 0 3692527..3693540 - 337 78224474 - Gmet_3283 - transposase IS4 3247 58.24 0 3694109..3694927 + 272 78224475 - Gmet_3284 - enoyl-CoA hydratase/isomerase 3248 55.03 0 3694914..3696743 + 609 78224476 - Gmet_3285 - sigma-54 dependent trancsriptional regulator 3249 58.47 0 3697191..3697946 + 251 78224477 - Gmet_3286 - IclR family transcriptional regulator 3250 53.07 -1 3698032..3698340 + 102 78224478 - Gmet_3287 - hypothetical protein 3251 61.38 0 3698350..3700317 + 655 78224479 - Gmet_3288 - Na+/solute symporter 3252 63.17 0 3700810..3701982 + 390 78224480 - Gmet_3289 - isovaleryl-CoA dehydrogenase 3253 64.43 0 3702037..3703644 + 535 78224481 - Gmet_3290 - carboxyl transferase 3254 68.81 +1 3703790..3704581 + 263 78224482 - Gmet_3291 - enoyl-CoA hydratase/isomerase 3255 66.87 +1 3704587..3706593 + 668 78224483 - Gmet_3292 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit 3256 65.81 +1 3706595..3707524 + 309 78224484 - Gmet_3293 - hydroxymethylglutaryl-CoA lyase 3257 60.81 0 3707551..3708864 + 437 78224485 - Gmet_3294 - Acetyl-CoA hydrolase/transferase 3258 63.04 0 3709007..3709585 + 192 78224486 - Gmet_3295 - hypothetical protein 3259 61.88 0 3709618..3710307 + 229 78224487 - Gmet_3296 - 3-oxoacid CoA-transferase, subunit A 3260 63.32 0 3710325..3710981 + 218 78224488 - Gmet_3297 - butyryl-CoA:acetate CoA transferase 3261 62.71 0 3711015..3711545 + 176 78224489 - Gmet_3298 - hypothetical protein 3262 62.58 0 3711681..3713027 + 448 78224490 - Gmet_3299 - hypothetical protein 3263 60.62 0 3713109..3713885 + 258 78224491 - Gmet_3300 - electron transfer flavoprotein subunit beta 3264 61.86 0 3713948..3714862 + 304 78224492 - Gmet_3301 - electron transfer flavoprotein subunit alpha 3265 64.97 0 3714912..3716087 + 391 78224493 - Gmet_3302 - thiolase 3266 58.87 0 3716370..3717716 - 448 78224494 - Gmet_3303 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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