version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3110 58.11 0 3544556..3544777 - 73 78224338 - Gmet_3147 - hypothetical protein 3111 60.22 0 3544862..3545047 - 61 78224339 - Gmet_3148 - putative lipoprotein 3112 61.20 0 3545209..3545574 - 121 78224340 - Gmet_3149 - hypothetical protein 3113 67.14 +1 3545635..3546486 - 283 78224341 - Gmet_3150 - lipoyl synthase 3114 65.60 +1 3546483..3547325 - 280 78224342 - Gmet_3151 - biotin/lipoate A/B protein ligase 3115 65.49 +1 3547303..3548748 - 481 78224343 - Gmet_3152 - glycine dehydrogenase subunit 2 3116 67.04 +1 3548739..3550085 - 448 78224344 - Gmet_3153 - glycine dehydrogenase subunit 1 3117 60.53 0 3550082..3550456 - 124 78224345 - Gmet_3154 - glycine cleavage system H protein 3118 63.64 0 3550507..3551595 - 362 78224346 - Gmet_3155 - glycine cleavage system T protein 3119 64.86 0 3551732..3552064 - 110 78224347 - Gmet_3156 - hydrogenase expression/synthesis, HypA 3120 61.72 0 3552237..3553691 + 484 78224348 - Gmet_3157 - histidine kinase 3121 64.65 0 3553803..3555191 + 462 78224349 - Gmet_3158 - two component, sigma54 specific, Fis family transcriptional regulator 3122 64.91 0 3555314..3557878 + 854 78224350 - Gmet_3159 - Alpha-glucan phosphorylase 3123 68.35 +1 3557975..3559693 + 572 78224351 - Gmet_3160 - hypothetical protein 3124 66.32 +1 3559680..3559964 + 94 78224352 - Gmet_3161 - FlhB domain-containing protein 3125 61.61 0 3560059..3561303 + 414 78224353 - Gmet_3162 - surface antigen (D15) 3126 65.70 +1 3561300..3562232 - 310 78224354 - Gmet_3163 - hypothetical protein 3127 63.61 0 3562229..3563176 - 315 78224355 - Gmet_3164 - XRE family transcriptional regulator 3128 61.11 0 3563325..3563612 + 95 78224356 - Gmet_3165 - cytochrome c3 3129 61.17 0 3563744..3564016 + 90 78224357 - Gmet_3166 - cytochrome c3 3130 66.63 +1 3563997..3566627 + 876 78224358 - Gmet_3167 - helicase c2 3131 57.89 0 3566608..3567063 - 151 78224359 - Gmet_3168 - hypothetical protein 3132 61.77 0 3567233..3568825 - 530 78224360 - Gmet_3169 - phosphoenolpyruvate carboxykinase 3133 61.46 0 3569039..3569230 + 63 78224361 - Gmet_3170 - 4Fe-4S ferredoxin, iron-sulfur binding protein 3134 59.12 0 3569267..3569425 + 52 78224362 - Gmet_3171 - rubredoxin-type Fe(Cys)4 protein 3135 53.33 -1 3569486..3569665 - 59 78224363 - Gmet_3172 - hypothetical protein 3136 60.34 0 3569777..3570850 - 357 78224364 - Gmet_3173 - aminotransferase, class V 3137 59.74 0 3571193..3572707 + 504 78224365 - Gmet_3174 - cytochrome c family protein 3138 63.02 0 3572960..3574414 - 484 78224366 - Gmet_3175 - glycogen/starch synthase, ADP-glucose type 3139 63.47 0 3574468..3575529 - 353 78224367 - Gmet_3176 - galactose-1-phosphate uridyl transferase, class I 3140 65.90 +1 3575507..3577711 - 734 78224368 - Gmet_3177 - glycoside hydrolase family protein 3141 61.81 0 3577708..3580218 - 836 78224369 - Gmet_3178 - phosphoglucomutase/phosphomannomutase family protein 3142 58.40 0 3580316..3580678 - 120 78224370 - Gmet_3179 - response regulator receiver domain-containing protein 3143 60.20 0 3580680..3582302 - 540 78224371 - Gmet_3180 - GAF sensor signal transduction histidine kinase 3144 51.77 -1 3582394..3582675 - 93 78224372 - Gmet_3181 - hypothetical protein 3145 66.38 +1 3582804..3584177 - 457 78224373 - Gmet_3182 - Poly(A) polymerase, PcnB 3146 53.25 -1 3584328..3585497 + 389 78224374 - Gmet_3183 - transposase IS4 3147 58.52 0 3585558..3585962 + 134 78224375 - Gmet_3184 - hypothetical protein 3148 66.11 +1 3586014..3586727 + 237 78224376 - Gmet_3185 - Iron-sulfur cluster-binding protein 3149 60.07 0 3586850..3587455 + 201 78224377 - Gmet_3186 - Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3150 65.77 +1 3587525..3589759 + 744 78224378 - Gmet_3187 - DNA polymerase B, exonuclease 3151 59.47 0 3589836..3590252 + 138 78224379 - Gmet_3188 - hypothetical protein 3152 62.43 0 3590249..3590626 + 125 78224380 - Gmet_3189 - hypothetical protein 3153 51.76 -1 3590611..3591093 + 160 78224381 - Gmet_3190 - hypothetical protein 3154 64.85 0 3591280..3593808 + 842 78224382 - Gmet_3191 - radical SAM family protein 3155 62.21 0 3593798..3595300 + 500 78224383 - Gmet_3192 - ribonuclease G 3156 64.89 0 3595319..3596497 + 392 78224384 purT Gmet_3193 - phosphoribosylglycinamide formyltransferase 2 3157 59.08 0 3596522..3596824 + 100 78224385 - Gmet_3194 - Rieske (2Fe-2S) region 3158 54.37 0 3596902..3597210 + 102 78224386 rplU Gmet_3195 - 50S ribosomal protein L21 3159 62.79 0 3597292..3597549 + 85 78224387 rpmA Gmet_3196 - 50S ribosomal protein L27 3160 64.60 0 3597639..3598655 + 338 78224388 obgE Gmet_3197 - GTPase ObgE 3161 66.31 +1 3598666..3599787 + 373 78224389 - Gmet_3198 - gamma-glutamyl kinase 3162 64.92 0 3599883..3601139 + 418 78224390 - Gmet_3199 - glutamate-5-semialdehyde dehydrogenase 3163 63.75 0 3601171..3601821 + 216 78224391 - Gmet_3200 - nicotinate-nucleotide adenylyltransferase 3164 61.36 0 3601811..3602206 + 131 78224392 - Gmet_3201 - Iojap-related protein 3165 64.73 0 3602203..3602667 + 154 78224393 - Gmet_3202 - hypothetical protein 3166 65.56 +1 3602698..3604236 + 512 78224394 - Gmet_3203 - phosphoglyceromutase 3167 61.43 0 3604335..3604754 - 139 78224395 - Gmet_3204 - TraR/DksA family transcriptional regulator 3168 62.93 0 3604842..3606179 - 445 78224396 - Gmet_3205 - hypothetical protein 3169 58.23 0 3606213..3606698 - 161 78224397 - Gmet_3206 - nucleotide-binding protein 3170 61.73 0 3606730..3607458 - 242 78224398 - Gmet_3207 - Outer membrane lipoprotein carrier protein LolA 3171 59.58 0 3607551..3608369 - 272 78224399 - Gmet_3208 - Outer membrane lipoprotein carrier protein LolA 3172 62.37 0 3608388..3608876 - 162 78224400 - Gmet_3209 - CheD, stimulates methylation of MCP proteins 3173 58.21 0 3608873..3609487 - 204 78224401 - Gmet_3210 - CheC, inhibitor of MCP methylation 3174 59.89 0 3609549..3609917 - 122 78224402 - Gmet_3211 - response regulator receiver domain-containing protein 3175 57.65 0 3610020..3610895 - 291 78224403 - Gmet_3212 - MCP methyltransferase, CheR-type 3176 64.55 0 3610982..3611971 - 329 78224404 - Gmet_3213 - thiamine-monophosphate kinase 3177 63.07 0 3611968..3614439 - 823 78224405 - Gmet_3214 - Lon-A peptidase 3178 60.71 0 3614439..3614891 - 150 78224406 - Gmet_3215 - heat shock protein Hsp20 3179 60.09 0 3615370..3617301 + 643 78224407 - Gmet_3216 - TPR repeat-containing protein 3180 54.84 0 3617404..3617589 - 61 78224408 - Gmet_3217 - twin-arginine translocation protein TatA/E 3181 59.60 0 3617851..3618303 + 150 78224409 - Gmet_3218 - response regulator receiver domain-containing protein 3182 63.11 0 3618425..3620422 + 665 78224410 - Gmet_3219 - excinuclease ABC subunit B 3183 64.53 0 3620439..3621140 + 233 78224411 - Gmet_3220 - response regulator receiver domain-containing protein 3184 66.35 +1 3621151..3622401 + 416 78224412 - Gmet_3221 - major facilitator transporter 3185 63.21 0 3622483..3623148 + 221 78224413 - Gmet_3222 - nitrite and sulphite reductase 4Fe-4S region 3186 68.28 +1 3623160..3626387 - 1075 78224414 - Gmet_3223 - UvrD/REP helicase 3187 65.58 +1 3626592..3627977 + 461 78224415 - Gmet_3224 - hypothetical protein 3188 61.85 0 3628008..3629708 + 566 78224416 - Gmet_3225 - peptidoglycan-binding LysM 3189 61.33 0 3629874..3630566 - 230 78224417 - Gmet_3226 - peptidoglycan-binding LysM 3190 62.45 0 3630568..3633558 - 996 78224418 - Gmet_3227 - hypothetical protein 3191 63.25 0 3633756..3635600 + 614 78224419 - Gmet_3228 - excinuclease ABC subunit C 3192 58.87 0 3635640..3636152 - 170 78224420 - Gmet_3229 - thioredoxin-related protein 3193 59.70 0 3636182..3636511 - 109 78224421 - Gmet_3230 - thioredoxin 3194 64.15 0 3636672..3637346 + 224 78224422 - Gmet_3231 - precorrin-2 dehydrogenase 3195 58.46 0 3637343..3638158 + 271 78224423 - Gmet_3232 - cytochrome c assembly protein 3196 61.84 0 3638175..3639479 + 434 78224424 hemA Gmet_3233 - glutamyl-tRNA reductase 3197 66.77 +1 3639530..3640486 + 318 78224425 - Gmet_3234 - porphobilinogen deaminase 3198 66.73 +1 3640496..3642037 + 513 78224426 - Gmet_3235 - uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase 3199 67.33 +1 3642090..3642848 + 252 78224427 - Gmet_3236 - TatD-related deoxyribonuclease:amidohydrolase 2 3200 63.80 0 3643065..3643832 + 255 78224428 - Gmet_3237 - UBA/THIF-type NAD/FAD binding fold 3201 58.03 0 3643911..3644408 + 165 78224429 - Gmet_3238 - rubrerythrin 3202 64.91 0 3644496..3646550 - 684 78224430 hppA Gmet_3239 - membrane-bound proton-translocating pyrophosphatase 3203 60.40 0 3646784..3647230 + 148 78224431 - Gmet_3240 - ferric uptake regulator family protein 3204 53.15 -1 3647255..3647365 + 36 78224432 - Gmet_3241 - hypothetical protein 3205 55.89 0 3647381..3647872 + 163 78224433 - Gmet_3242 - rubrerythrin 3206 59.84 0 3647981..3649195 + 404 78224434 - Gmet_3243 - Beta-lactamase-like:flavodoxin/nitric oxide synthase 3207 66.43 +1 3649202..3650464 + 420 78224435 - Gmet_3244 - hypothetical protein 3208 63.55 0 3650590..3651969 + 459 78224436 - Gmet_3245 - FAD linked oxidase-like 3209 66.35 +1 3652167..3653432 + 421 78224437 - Gmet_3246 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0