version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2997 57.19 0 3417813..3418139 - 108 78224225 - Gmet_3032 - hypothetical protein 2998 69.55 +1 3418230..3419444 - 404 78224226 - Gmet_3033 - tRNA pseudouridine synthase D, TruD 2999 60.92 0 3419441..3420154 - 237 78224227 - Gmet_3034 - putative methyltransferase 3000 64.46 0 3420212..3421528 + 438 78224228 - Gmet_3035 - ATP-dependent RNA helicase RhlB 3001 64.31 0 3421619..3422848 - 409 78224229 - Gmet_3036 - hypothetical protein 3002 66.53 +1 3422845..3423570 - 241 78224230 - Gmet_3037 - ABC transporter-related protein 3003 63.37 0 3423571..3424782 - 403 78224231 - Gmet_3038 - secretion protein HlyD 3004 53.25 -1 3425233..3426402 + 389 78224232 - Gmet_3039 - transposase IS4 3005 66.58 +1 3426420..3427550 - 376 78224233 - Gmet_3040 - hypothetical protein 3006 67.47 +1 3427547..3428788 - 413 78224234 - Gmet_3041 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 3007 66.21 +1 3428975..3429859 + 294 78224235 - Gmet_3042 - tyrosine recombinase XerD subunit 3008 66.89 +1 3430237..3431595 + 452 78224236 - Gmet_3043 - DEAD/DEAH box helicase-like 3009 60.96 0 3431741..3433336 - 531 78224237 - Gmet_3044 - Acetyl-CoA hydrolase/transferase 3010 62.11 0 3433596..3434297 - 233 78224238 - Gmet_3045 - Mg chelatase-related protein 3011 51.52 -1 3434469..3435128 + 219 78224239 - Gmet_3046 - hypothetical protein 3012 52.07 -1 3435106..3437016 + 636 78224240 - Gmet_3047 - transposase 3013 55.70 0 3437018..3437929 + 303 78224241 - Gmet_3048 - TniB 3014 52.93 -1 3437926..3439119 + 397 78224242 - Gmet_3049 - hypothetical protein 3015 48.39 -1 3439706..3445078 + 1790 78224243 - Gmet_3050 - superfamily I DNA/RNA helicase 3016 43.73 -2 3445091..3446341 + 416 78224244 - Gmet_3051 - hypothetical protein 3017 42.52 -2 3446349..3448667 - 772 78224245 - Gmet_3052 - peptidase S1C, HrtA/DegP2/Q/S 3018 51.57 -1 3449164..3449706 - 180 78224246 - Gmet_3053 - SNase-like nuclease 3019 51.49 -1 3449720..3450154 - 144 78224247 - Gmet_3054 - hypothetical protein 3020 61.95 0 3450169..3450825 - 218 78224248 - Gmet_3055 - DNA polymerase III, epsilon subunit 3021 56.81 0 3450825..3451037 - 70 78224249 - Gmet_3056 - histone-like DNA-binding protein 3022 47.28 -2 3451422..3451715 + 97 78224250 - Gmet_3057 - histone-like DNA-binding protein 3023 50.07 -1 3451721..3454702 - 993 78224251 - Gmet_3058 - helicase-like 3024 48.87 -1 3454707..3456482 - 591 78224252 - Gmet_3059 - hypothetical protein 3025 50.41 -1 3456479..3457696 - 405 78224253 - Gmet_3060 - hypothetical protein 3026 53.65 -1 3457708..3458913 - 401 78224254 - Gmet_3061 - hypothetical protein 3027 53.70 -1 3458900..3462322 - 1140 78224255 - Gmet_3062 - hypothetical protein 3028 55.39 0 3462319..3462939 - 206 78224256 - Gmet_3063 - hypothetical protein 3029 54.11 0 3462943..3464367 - 474 78224257 - Gmet_3064 - hypothetical protein 3030 56.19 0 3464632..3464946 - 104 78224258 - Gmet_3065 - hypothetical protein 3031 48.89 -1 3465157..3465516 - 119 78224259 - Gmet_3066 - hypothetical protein 3032 48.86 -1 3465911..3467617 - 568 78224260 - Gmet_3068 - hypothetical protein 3033 62.78 0 3467607..3468533 - 308 78224261 - Gmet_3069 - magnesium chelatase, ChlI subunit 3034 62.78 0 3468586..3469536 - 316 78224262 - Gmet_3070 - thioredoxin reductase 3035 65.97 +1 3469679..3470683 + 334 78224263 - Gmet_3071 - cation efflux protein 3036 65.18 0 3470702..3471910 + 402 78224264 - Gmet_3072 - threonine dehydratase 3037 62.74 0 3471861..3472547 - 228 78224265 - Gmet_3073 - hypothetical protein 3038 59.41 0 3472706..3473491 - 261 78224266 - Gmet_3074 - putative GTP cyclohydrolase 3039 65.13 0 3473550..3474263 - 237 78224267 - Gmet_3075 - ExsB 3040 60.37 0 3474292..3474720 - 142 78224268 - Gmet_3076 - hypothetical protein 3041 62.07 0 3474717..3474977 - 86 78224269 - Gmet_3077 - prevent-host-death protein 3042 64.06 0 3475062..3476252 - 396 78224270 - Gmet_3078 - phospholipase D/transphosphatidylase 3043 55.22 0 3476377..3476577 - 66 78224271 - Gmet_3079 - hypothetical protein 3044 63.56 0 3476630..3476854 - 74 78224272 - Gmet_3080 - nitrogen-fixing NifU-like 3045 51.97 -1 3477079..3478248 - 389 78224273 - Gmet_3081 - hypothetical protein 3046 68.30 +1 3478370..3479779 - 469 78224274 aspA Gmet_3082 - aspartate ammonia-lyase 3047 61.90 0 3479819..3480910 - 363 78224275 - Gmet_3083 - HAD family hydrolase 3048 65.80 +1 3480960..3482117 - 385 78224276 - Gmet_3084 - hypothetical protein 3049 64.13 0 3482224..3484941 - 905 78224277 - Gmet_3085 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 3050 66.67 +1 3485051..3486055 - 334 78224278 - Gmet_3086 - transcriptional regulator, putative 3051 60.60 0 3486132..3488555 - 807 78224279 - Gmet_3087 - methyl-accepting chemotaxis sensory transducer 3052 61.32 0 3488747..3490111 - 454 78224280 - Gmet_3088 - cytochrome c family protein 3053 56.23 0 3490259..3490555 - 98 78224281 - Gmet_3089 - hypothetical protein 3054 59.06 0 3490637..3492253 - 538 78224282 - Gmet_3090 - hypothetical protein 3055 64.36 0 3492846..3493886 + 346 78224283 - Gmet_3091 - di-haem cytochrome c peroxidase 3056 51.88 -1 3493964..3494308 + 114 78224284 - Gmet_3092 - hypothetical protein 3057 52.25 -1 3494305..3494526 + 73 78224285 - Gmet_3093 - hypothetical protein 3058 59.51 0 3494880..3495941 - 353 78224286 flhB Gmet_3094 - flagellar biosynthesis protein FlhB 3059 59.12 0 3495941..3496735 - 264 78224287 - Gmet_3095 - flagellar biosynthesis protein FliR 3060 58.15 0 3496819..3497088 - 89 78224288 - Gmet_3096 - flagellar biosynthesis protein FliQ 3061 61.49 0 3497167..3497919 - 250 78224289 fliP Gmet_3097 - flagellar biosynthesis protein FliP 3062 64.15 0 3497939..3498415 - 158 78224290 - Gmet_3098 - hypothetical protein 3063 60.13 0 3498427..3498732 - 101 78224291 - Gmet_3099 - flagellar motor switch FliN 3064 58.74 0 3498729..3499712 - 327 78224292 - Gmet_3100 - flagellar motor switch protein FliM 3065 59.24 0 3499758..3500282 - 174 78224293 - Gmet_3101 - flagellar basal body-associated protein FliL 3066 55.31 0 3500752..3501975 + 407 78224294 - Gmet_3102 - IS204/IS1001/IS1096/IS1165 transposase 3067 63.57 0 3502023..3503282 - 419 78224295 - Gmet_3103 - hypothetical protein 3068 60.51 0 3503441..3503830 - 129 78224296 - Gmet_3104 - hypothetical protein 3069 61.49 0 3503838..3504494 - 218 78224297 - Gmet_3105 - flagellar hook capping protein 3070 66.18 +1 3504557..3505996 - 479 78224298 - Gmet_3106 - flagellar hook-length control protein 3071 65.03 0 3506211..3506759 - 182 78224299 - Gmet_3107 - hypothetical protein 3072 62.64 0 3506763..3507209 - 148 78224300 - Gmet_3108 - flagellar export FliJ 3073 63.81 0 3507269..3508600 - 443 78224301 - Gmet_3109 - ATPase FliI/YscN 3074 67.21 +1 3508587..3509501 - 304 78224302 - Gmet_3110 - flagellar assembly protein fliH, putative 3075 60.42 0 3509488..3510480 - 330 78224303 - Gmet_3111 - flagellar motor switch protein FliG 3076 64.02 0 3510531..3512114 - 527 78224304 - Gmet_3112 - flagellar FliF M-ring protein 3077 60.46 0 3512284..3512589 - 101 78224305 - Gmet_3113 - flagellar hook-basal body complex protein FliE 3078 65.77 +1 3512694..3513137 - 147 78224306 - Gmet_3114 - flagellar basal-body rod protein FlgC 3079 54.85 0 3513137..3513559 - 140 78224307 - Gmet_3115 - flagellar basal-body rod protein FlgB 3080 65.00 0 3513711..3515813 - 700 78224308 - Gmet_3116 - tetratricopeptide TPR_4 3081 62.20 0 3515997..3517094 - 365 78224309 - Gmet_3117 - response regulator receiver domain-containing protein 3082 59.17 0 3517119..3517625 - 168 78224310 - Gmet_3118 - hypothetical protein 3083 59.23 0 3517622..3517984 - 120 78224311 - Gmet_3119 - response regulator receiver domain-containing protein 3084 65.56 +1 3518063..3518332 - 89 78224312 - Gmet_3120 - hypothetical protein 3085 55.15 0 3518392..3518799 - 135 78224313 - Gmet_3121 - hemerythrin-like, metal-binding protein 3086 63.28 0 3518914..3519297 - 127 78224314 - Gmet_3122 - rhodanese-like protein 3087 68.35 +1 3519319..3520149 - 276 78224315 - Gmet_3123 - Beta-lactamase-like 3088 56.81 0 3520146..3520358 - 70 78224316 - Gmet_3124 - hypothetical protein 3089 65.41 +1 3520380..3520778 - 132 78224317 - Gmet_3125 - hypothetical protein 3090 65.03 0 3520827..3521255 - 142 78224318 - Gmet_3126 - hypothetical protein 3091 64.86 0 3521317..3524532 - 1071 78224319 - Gmet_3127 - acriflavin resistance protein 3092 68.82 +1 3524715..3525827 - 370 78224320 - Gmet_3128 - secretion protein HlyD 3093 65.70 +1 3525824..3527164 - 446 78224321 - Gmet_3129 - Outer membrane efflux protein 3094 62.32 0 3527406..3527888 + 160 78224322 - Gmet_3130 - hypothetical protein 3095 60.98 0 3527965..3528966 - 333 78224323 - Gmet_3131 - phosphate transporter 3096 56.96 0 3528959..3529576 - 205 78224324 - Gmet_3132 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.