version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2435 59.75 0 2784467..2786287 + 606 78223663 - Gmet_2460 - histidine kinase 2436 62.82 0 2786373..2786606 - 77 78223664 - Gmet_2461 - hypothetical protein 2437 64.84 0 2786669..2786887 - 72 78223665 - Gmet_2462 - hypothetical protein 2438 56.24 0 2787216..2788097 - 293 78223666 - Gmet_2463 - peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG 2439 62.60 0 2788435..2790255 + 606 78223667 - Gmet_2464 - TatD-related deoxyribonuclease:radical SAM family protein 2440 64.91 0 2790657..2792021 + 454 78223668 - Gmet_2465 - major facilitator transporter 2441 65.96 +1 2792209..2793897 + 562 78223669 - Gmet_2466 - peptidoglycan binding domain-containing protein 2442 66.21 +1 2793894..2794550 + 218 78223670 - Gmet_2467 - hypothetical protein 2443 63.43 0 2794574..2795377 - 267 78223671 - Gmet_2468 - hypothetical protein 2444 62.59 0 2795421..2805944 - 3507 78223672 - Gmet_2469 - fibronectin, type III 2445 63.01 0 2805938..2810503 - 1521 78223673 - Gmet_2470 - high-molecular-weight cytochrome c 2446 58.53 0 2810956..2811336 - 126 78223674 - Gmet_2471 - mannose-6-phosphate isomerase, type II:cupin region 2447 64.06 0 2811352..2812194 - 280 78223675 - Gmet_2472 - dTDP-4-dehydrorhamnose reductase 2448 61.28 0 2812191..2813267 - 358 78223676 - Gmet_2473 - dTDP-glucose 4,6-dehydratase 2449 60.60 0 2813316..2815409 - 697 78223677 - Gmet_2474 - organic solvent tolerance protein, putative 2450 65.18 0 2815423..2816697 - 424 78223678 - Gmet_2475 - folylpolyglutamate synthetase 2451 61.68 0 2816816..2817658 - 280 78223679 - Gmet_2476 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2452 61.36 0 2817743..2818552 - 269 78223680 - Gmet_2477 - tryptophan synthase subunit alpha 2453 60.54 0 2818594..2820795 - 733 78223681 - Gmet_2478 - methyl-accepting chemotaxis sensory transducer 2454 65.72 +1 2820909..2822813 - 634 78223682 - Gmet_2479 - ABC transporter-related protein 2455 56.75 0 2822810..2823313 - 167 78223683 - Gmet_2480 - putative lipoprotein 2456 60.41 0 2823456..2824190 - 244 78223684 - Gmet_2481 - hypothetical protein 2457 65.07 0 2824488..2825678 - 396 78223685 - Gmet_2482 - tryptophan synthase subunit beta 2458 60.91 0 2825811..2826296 - 161 78223686 - Gmet_2483 - 3-demethylubiquinone-9 3-methyltransferase 2459 53.59 -1 2826935..2828188 + 417 78223687 - Gmet_2484 - IS204/IS1001/IS1096/IS1165 transposase 2460 51.78 -1 2828112..2828870 - 252 78223688 - Gmet_2485 - hypothetical protein 2461 40.75 -2 2829240..2830196 - 318 78223689 - Gmet_2486 - hypothetical protein 2462 58.40 0 2830722..2831798 + 358 78223690 - Gmet_2488 - transposase IS4 2463 42.10 -2 2831957..2832709 - 250 78223691 - Gmet_2489 - hypothetical protein 2464 41.73 -2 2832925..2833722 - 265 78223692 - Gmet_2490 - hypothetical protein 2465 66.17 +1 2834485..2835093 - 202 78223693 - Gmet_2492 - N-(5'-phosphoribosyl)anthranilate isomerase 2466 66.52 +1 2835098..2836453 - 451 78223694 - Gmet_2493 - tryptophan synthase subunit beta 2467 66.67 +1 2836618..2837418 - 266 78223695 - Gmet_2494 - indole-3-glycerol-phosphate synthase 2468 65.62 +1 2837470..2838522 - 350 78223696 - Gmet_2495 - anthranilate phosphoribosyltransferase 2469 63.51 0 2838519..2839088 - 189 78223697 - Gmet_2496 - anthranilate synthase component II 2470 66.33 +1 2839090..2840565 - 491 78223698 - Gmet_2497 - anthranilate synthase, component I 2471 60.93 0 2840812..2842764 + 650 78223699 - Gmet_2498 - heat shock protein 90 2472 48.15 -1 2842903..2843172 + 89 78223700 - Gmet_2499 - hypothetical protein 2473 44.57 -2 2843184..2843441 + 85 78223701 - Gmet_2500 - hypothetical protein 2474 55.69 0 2843788..2844042 + 84 78223702 - Gmet_2502 - transcriptional regulator/antitoxin, MazE 2475 53.94 0 2844030..2844359 + 109 78223703 - Gmet_2503 - transcriptional modulator of MazE/toxin, MazF 2476 61.31 0 2844507..2844674 + 55 78223704 - Gmet_2504 - hypothetical protein 2477 61.93 0 2844932..2845459 + 175 78223705 - Gmet_2505 - ErfK/YbiS/YcfS/YnhG 2478 63.62 0 2845490..2846440 - 316 78223706 - Gmet_2506 - rhomboid-like protein 2479 53.25 -1 2846500..2847669 - 389 78223707 - Gmet_2507 - transposase IS4 2480 64.94 0 2847872..2849263 + 463 78223708 - Gmet_2508 - multi anti extrusion protein MatE 2481 66.48 +1 2849294..2850352 + 352 78223709 - Gmet_2509 - dehydrogenase, E1 component 2482 68.33 +1 2850522..2851484 + 320 78223710 - Gmet_2510 - transketolase-like 2483 66.24 +1 2851495..2852658 + 387 78223711 - Gmet_2511 - branched-chain alpha-keto acid dehydrogenase subunit E2 2484 60.67 0 2852852..2853418 + 188 78223712 - Gmet_2512 - hypothetical protein 2485 55.41 0 2853706..2853927 + 73 78223713 - Gmet_2513 - hypothetical protein 2486 55.23 0 2854168..2855391 - 407 78223714 - Gmet_2515 - IS204/IS1001/IS1096/IS1165 transposase 2487 66.31 +1 2855783..2856349 + 188 78223715 - Gmet_2516 - hemerythrin HHE cation binding region 2488 61.99 0 2856706..2858073 - 455 78223716 - Gmet_2517 - Outer membrane efflux protein 2489 62.57 0 2858070..2861195 - 1041 78223717 - Gmet_2518 - acriflavin resistance protein 2490 65.01 0 2861199..2862347 - 382 78223718 - Gmet_2519 - secretion protein HlyD 2491 64.14 0 2862590..2863897 - 435 78223719 - Gmet_2520 - nitrite and sulphite reductase 4Fe-4S region 2492 65.94 +1 2864109..2866175 + 688 78223720 - Gmet_2521 - elongation factor G 2493 54.57 0 2866289..2866726 + 145 78223721 mscL Gmet_2522 - large-conductance mechanosensitive channel 2494 56.64 0 2866861..2867229 + 122 78223722 - Gmet_2523 - hypothetical protein 2495 65.20 0 2867337..2868971 + 544 78223723 - Gmet_2524 - ABC transporter-related protein 2496 53.44 -1 2869102..2869290 + 62 78223724 - Gmet_2525 - hypothetical protein 2497 57.95 0 2869419..2869934 - 171 78223725 - Gmet_2526 - SNase-like nuclease 2498 56.10 0 2870081..2870326 - 81 78223726 - Gmet_2527 - hypothetical protein 2499 54.63 0 2870550..2870657 - 35 78223727 - Gmet_2528 - hypothetical protein 2500 62.71 0 2870657..2872096 - 479 78223728 - Gmet_2529 - peptidase M16-like 2501 63.11 0 2872115..2873605 - 496 78223729 - Gmet_2530 - peptidase M16-like 2502 64.71 0 2873755..2874726 - 323 78223730 - Gmet_2531 - methyltransferase, putative 2503 58.71 0 2874723..2875526 - 267 78223731 - Gmet_2532 - methyltransferase 2504 49.48 -1 2875653..2875943 + 96 78223732 - Gmet_2533 - hypothetical protein 2505 48.82 -1 2875953..2876249 + 98 78223733 - Gmet_2534 - putative transcriptional regulator 2506 42.10 -2 2876660..2878267 - 535 78223734 - Gmet_2535 - hypothetical protein 2507 58.49 0 2879045..2879839 - 264 78223735 - Gmet_2538 - transposase/IS protein 2508 58.09 0 2879836..2880861 - 341 78223736 - Gmet_2539 - integrase catalytic subunit 2509 40.04 -2 2881714..2882742 - 342 78223737 - Gmet_2540 - ATP-binding region, ATPase-like 2510 63.43 0 2883085..2884167 - 360 78223738 - Gmet_2541 - virulence factor MCE-like protein-related protein 2511 61.47 0 2884164..2884952 - 262 78223739 - Gmet_2542 - ABC transporter-related protein 2512 61.94 0 2884957..2885718 - 253 78223740 - Gmet_2543 - hypothetical protein 2513 64.13 0 2885715..2888039 - 774 78223741 - Gmet_2544 - peptidase S16, ATP-dependent protease La 2514 65.47 +1 2888176..2890101 - 641 78223742 - Gmet_2545 - ABC transporter-related protein 2515 64.02 0 2890391..2892811 + 806 78223743 - Gmet_2546 - ribonuclease E 2516 62.08 0 2892838..2893665 + 275 78223744 - Gmet_2547 - hypothetical protein 2517 50.68 -1 2893948..2894241 + 97 78223745 - Gmet_2548 - hypothetical protein 2518 62.51 0 2894375..2895577 + 400 78223746 - Gmet_2549 - S-adenosylmethionine synthetase 2519 64.05 0 2895584..2897224 - 546 78223747 - Gmet_2550 - TrkA-C:YidE/YbjL duplication 2520 60.76 0 2897231..2897653 - 140 78223748 - Gmet_2551 - hypothetical protein 2521 64.47 0 2897663..2898391 - 242 78223749 - Gmet_2552 - Smr protein/MutS2-like 2522 59.04 0 2898388..2899266 - 292 78223750 - Gmet_2553 - OmpA/MotB 2523 61.23 0 2899321..2900535 - 404 78223751 - Gmet_2554 - hypothetical protein 2524 57.79 0 2900616..2901347 - 243 78223752 - Gmet_2555 - hypothetical protein 2525 60.00 0 2901389..2902888 - 499 78223753 - Gmet_2556 - peptidoglycan-binding LysM:lytic transglycosylase, catalytic 2526 63.89 0 2902977..2904527 - 516 78223754 - Gmet_2557 - small GTP-binding protein domain-containing protein 2527 61.61 0 2904679..2905449 - 256 78223755 - Gmet_2558 - enoyl-[acyl-carrier-protein] reductase [NADH] 2528 62.09 0 2905684..2907345 + 553 78223756 - Gmet_2559 - metal dependent phosphohydrolase 2529 56.77 0 2907356..2907547 - 63 78223757 - Gmet_2560 - hypothetical protein 2530 68.21 +1 2907726..2908700 + 324 78223758 - Gmet_2561 - dihydrouridine synthase TIM-barrel protein nifR3 2531 65.48 +1 2908697..2909788 + 363 78223759 - Gmet_2562 - signal transduction histidine kinase, nitrogen specific, NtrB 2532 62.58 0 2909886..2911328 + 480 78223760 - Gmet_2563 - two component, sigma54 specific, Fis family transcriptional regulator 2533 63.83 0 2911486..2912049 + 187 78223761 - Gmet_2564 - isochorismatase hydrolase 2534 54.04 0 2912147..2913223 + 358 78223762 - Gmet_2565 - transposase IS116/IS110/IS902 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.