version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2416 65.99 +1 2764934..2765974 - 346 78223644 - Gmet_2441 - cobalamin (vitamin B12) biosynthesis CbiM protein 2417 63.26 0 2766516..2767160 - 214 78223645 - Gmet_2442 - Iron dependent repressor:FeoA 2418 57.38 0 2767202..2767384 - 60 78223646 - Gmet_2443 - hypothetical protein 2419 62.25 0 2767381..2769372 - 663 78223647 - Gmet_2444 - ferrous iron transport protein B 2420 58.56 0 2769472..2769903 - 143 78223648 - Gmet_2445 - ferric uptake regulator family protein 2421 61.90 0 2770019..2771572 - 517 78223649 - Gmet_2446 - twin-arginine translocation pathway signal 2422 50.00 -1 2771878..2772213 - 111 78223650 - Gmet_2447 - hypothetical protein 2423 59.76 0 2772278..2773450 - 390 78223651 - Gmet_2448 - hypothetical protein 2424 46.45 -2 2773465..2773746 - 93 78223652 - Gmet_2449 - hypothetical protein 2425 60.58 0 2773838..2774248 - 136 78223653 - Gmet_2450 - glyoxalase/bleomycin resistance protein/dioxygenase 2426 57.75 0 2774253..2774981 - 242 78223654 - Gmet_2451 - cytochrome c biogenesis protein, transmembrane region 2427 58.87 0 2775127..2775639 - 170 78223655 - Gmet_2452 - thioredoxin family protein 2428 63.56 0 2775636..2777021 - 461 78223656 - Gmet_2453 - two component, sigma54 specific, Fis family transcriptional regulator 2429 63.50 0 2777032..2778135 - 367 78223657 - Gmet_2454 - histidine kinase 2430 62.64 0 2778262..2779230 - 322 78223658 - Gmet_2455 - polyprenyl synthetase 2431 63.26 0 2779523..2780197 + 224 78223659 - Gmet_2456 - hypothetical protein 2432 63.53 0 2780198..2781154 + 318 78223660 - Gmet_2457 - radical SAM family protein 2433 67.67 +1 2781173..2782762 + 529 78223661 pgi Gmet_2458 - glucose-6-phosphate isomerase 2434 57.58 0 2782825..2784045 - 406 78223662 - Gmet_2459 - hypothetical protein 2435 59.75 0 2784467..2786287 + 606 78223663 - Gmet_2460 - histidine kinase 2436 62.82 0 2786373..2786606 - 77 78223664 - Gmet_2461 - hypothetical protein 2437 64.84 0 2786669..2786887 - 72 78223665 - Gmet_2462 - hypothetical protein 2438 56.24 0 2787216..2788097 - 293 78223666 - Gmet_2463 - peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG 2439 62.60 0 2788435..2790255 + 606 78223667 - Gmet_2464 - TatD-related deoxyribonuclease:radical SAM family protein 2440 64.91 0 2790657..2792021 + 454 78223668 - Gmet_2465 - major facilitator transporter 2441 65.96 +1 2792209..2793897 + 562 78223669 - Gmet_2466 - peptidoglycan binding domain-containing protein 2442 66.21 +1 2793894..2794550 + 218 78223670 - Gmet_2467 - hypothetical protein 2443 63.43 0 2794574..2795377 - 267 78223671 - Gmet_2468 - hypothetical protein 2444 62.59 0 2795421..2805944 - 3507 78223672 - Gmet_2469 - fibronectin, type III 2445 63.01 0 2805938..2810503 - 1521 78223673 - Gmet_2470 - high-molecular-weight cytochrome c 2446 58.53 0 2810956..2811336 - 126 78223674 - Gmet_2471 - mannose-6-phosphate isomerase, type II:cupin region 2447 64.06 0 2811352..2812194 - 280 78223675 - Gmet_2472 - dTDP-4-dehydrorhamnose reductase 2448 61.28 0 2812191..2813267 - 358 78223676 - Gmet_2473 - dTDP-glucose 4,6-dehydratase 2449 60.60 0 2813316..2815409 - 697 78223677 - Gmet_2474 - organic solvent tolerance protein, putative 2450 65.18 0 2815423..2816697 - 424 78223678 - Gmet_2475 - folylpolyglutamate synthetase 2451 61.68 0 2816816..2817658 - 280 78223679 - Gmet_2476 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2452 61.36 0 2817743..2818552 - 269 78223680 - Gmet_2477 - tryptophan synthase subunit alpha 2453 60.54 0 2818594..2820795 - 733 78223681 - Gmet_2478 - methyl-accepting chemotaxis sensory transducer 2454 65.72 +1 2820909..2822813 - 634 78223682 - Gmet_2479 - ABC transporter-related protein 2455 56.75 0 2822810..2823313 - 167 78223683 - Gmet_2480 - putative lipoprotein 2456 60.41 0 2823456..2824190 - 244 78223684 - Gmet_2481 - hypothetical protein 2457 65.07 0 2824488..2825678 - 396 78223685 - Gmet_2482 - tryptophan synthase subunit beta 2458 60.91 0 2825811..2826296 - 161 78223686 - Gmet_2483 - 3-demethylubiquinone-9 3-methyltransferase 2459 53.59 -1 2826935..2828188 + 417 78223687 - Gmet_2484 - IS204/IS1001/IS1096/IS1165 transposase 2460 51.78 -1 2828112..2828870 - 252 78223688 - Gmet_2485 - hypothetical protein 2461 40.75 -2 2829240..2830196 - 318 78223689 - Gmet_2486 - hypothetical protein 2462 58.40 0 2830722..2831798 + 358 78223690 - Gmet_2488 - transposase IS4 2463 42.10 -2 2831957..2832709 - 250 78223691 - Gmet_2489 - hypothetical protein 2464 41.73 -2 2832925..2833722 - 265 78223692 - Gmet_2490 - hypothetical protein 2465 66.17 +1 2834485..2835093 - 202 78223693 - Gmet_2492 - N-(5'-phosphoribosyl)anthranilate isomerase 2466 66.52 +1 2835098..2836453 - 451 78223694 - Gmet_2493 - tryptophan synthase subunit beta 2467 66.67 +1 2836618..2837418 - 266 78223695 - Gmet_2494 - indole-3-glycerol-phosphate synthase 2468 65.62 +1 2837470..2838522 - 350 78223696 - Gmet_2495 - anthranilate phosphoribosyltransferase 2469 63.51 0 2838519..2839088 - 189 78223697 - Gmet_2496 - anthranilate synthase component II 2470 66.33 +1 2839090..2840565 - 491 78223698 - Gmet_2497 - anthranilate synthase, component I 2471 60.93 0 2840812..2842764 + 650 78223699 - Gmet_2498 - heat shock protein 90 2472 48.15 -1 2842903..2843172 + 89 78223700 - Gmet_2499 - hypothetical protein 2473 44.57 -2 2843184..2843441 + 85 78223701 - Gmet_2500 - hypothetical protein 2474 55.69 0 2843788..2844042 + 84 78223702 - Gmet_2502 - transcriptional regulator/antitoxin, MazE 2475 53.94 0 2844030..2844359 + 109 78223703 - Gmet_2503 - transcriptional modulator of MazE/toxin, MazF 2476 61.31 0 2844507..2844674 + 55 78223704 - Gmet_2504 - hypothetical protein 2477 61.93 0 2844932..2845459 + 175 78223705 - Gmet_2505 - ErfK/YbiS/YcfS/YnhG 2478 63.62 0 2845490..2846440 - 316 78223706 - Gmet_2506 - rhomboid-like protein 2479 53.25 -1 2846500..2847669 - 389 78223707 - Gmet_2507 - transposase IS4 2480 64.94 0 2847872..2849263 + 463 78223708 - Gmet_2508 - multi anti extrusion protein MatE 2481 66.48 +1 2849294..2850352 + 352 78223709 - Gmet_2509 - dehydrogenase, E1 component 2482 68.33 +1 2850522..2851484 + 320 78223710 - Gmet_2510 - transketolase-like 2483 66.24 +1 2851495..2852658 + 387 78223711 - Gmet_2511 - branched-chain alpha-keto acid dehydrogenase subunit E2 2484 60.67 0 2852852..2853418 + 188 78223712 - Gmet_2512 - hypothetical protein 2485 55.41 0 2853706..2853927 + 73 78223713 - Gmet_2513 - hypothetical protein 2486 55.23 0 2854168..2855391 - 407 78223714 - Gmet_2515 - IS204/IS1001/IS1096/IS1165 transposase 2487 66.31 +1 2855783..2856349 + 188 78223715 - Gmet_2516 - hemerythrin HHE cation binding region 2488 61.99 0 2856706..2858073 - 455 78223716 - Gmet_2517 - Outer membrane efflux protein 2489 62.57 0 2858070..2861195 - 1041 78223717 - Gmet_2518 - acriflavin resistance protein 2490 65.01 0 2861199..2862347 - 382 78223718 - Gmet_2519 - secretion protein HlyD 2491 64.14 0 2862590..2863897 - 435 78223719 - Gmet_2520 - nitrite and sulphite reductase 4Fe-4S region 2492 65.94 +1 2864109..2866175 + 688 78223720 - Gmet_2521 - elongation factor G 2493 54.57 0 2866289..2866726 + 145 78223721 mscL Gmet_2522 - large-conductance mechanosensitive channel 2494 56.64 0 2866861..2867229 + 122 78223722 - Gmet_2523 - hypothetical protein 2495 65.20 0 2867337..2868971 + 544 78223723 - Gmet_2524 - ABC transporter-related protein 2496 53.44 -1 2869102..2869290 + 62 78223724 - Gmet_2525 - hypothetical protein 2497 57.95 0 2869419..2869934 - 171 78223725 - Gmet_2526 - SNase-like nuclease 2498 56.10 0 2870081..2870326 - 81 78223726 - Gmet_2527 - hypothetical protein 2499 54.63 0 2870550..2870657 - 35 78223727 - Gmet_2528 - hypothetical protein 2500 62.71 0 2870657..2872096 - 479 78223728 - Gmet_2529 - peptidase M16-like 2501 63.11 0 2872115..2873605 - 496 78223729 - Gmet_2530 - peptidase M16-like 2502 64.71 0 2873755..2874726 - 323 78223730 - Gmet_2531 - methyltransferase, putative 2503 58.71 0 2874723..2875526 - 267 78223731 - Gmet_2532 - methyltransferase 2504 49.48 -1 2875653..2875943 + 96 78223732 - Gmet_2533 - hypothetical protein 2505 48.82 -1 2875953..2876249 + 98 78223733 - Gmet_2534 - putative transcriptional regulator 2506 42.10 -2 2876660..2878267 - 535 78223734 - Gmet_2535 - hypothetical protein 2507 58.49 0 2879045..2879839 - 264 78223735 - Gmet_2538 - transposase/IS protein 2508 58.09 0 2879836..2880861 - 341 78223736 - Gmet_2539 - integrase catalytic subunit 2509 40.04 -2 2881714..2882742 - 342 78223737 - Gmet_2540 - ATP-binding region, ATPase-like 2510 63.43 0 2883085..2884167 - 360 78223738 - Gmet_2541 - virulence factor MCE-like protein-related protein 2511 61.47 0 2884164..2884952 - 262 78223739 - Gmet_2542 - ABC transporter-related protein 2512 61.94 0 2884957..2885718 - 253 78223740 - Gmet_2543 - hypothetical protein 2513 64.13 0 2885715..2888039 - 774 78223741 - Gmet_2544 - peptidase S16, ATP-dependent protease La 2514 65.47 +1 2888176..2890101 - 641 78223742 - Gmet_2545 - ABC transporter-related protein 2515 64.02 0 2890391..2892811 + 806 78223743 - Gmet_2546 - ribonuclease E 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0