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Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1844 51.78 -1 2078196..2079404 - 402 78223072 - Gmet_1865 - type II secretion system protein 1845 53.61 -1 2079506..2079934 - 142 78223073 - Gmet_1866 - hypothetical protein 1846 47.92 -2 2079955..2081058 - 367 78223074 - Gmet_1867 - cytochrome c family protein 1847 49.15 -1 2081069..2081833 - 254 78223075 - Gmet_1868 - cytochrome c family protein 1848 51.88 -1 2081830..2082891 - 353 78223076 - Gmet_1869 - NHL repeat-containing protein 1849 51.69 -1 2083063..2083803 - 246 78223077 - Gmet_1870 - glycosyl transferase family protein 1850 51.74 -1 2084434..2086851 - 805 78223078 - Gmet_1871 - Lon-A peptidase 1851 50.88 -1 2086865..2088118 - 417 78223079 clpX Gmet_1872 - ATP-dependent protease ATP-binding subunit 1852 51.67 -1 2088115..2088714 - 199 78223080 - Gmet_1873 - ATP-dependent Clp protease proteolytic subunit ClpP 1853 50.61 -1 2088739..2090040 - 433 78223081 - Gmet_1874 - trigger factor 1854 50.76 -1 2090602..2091192 - 196 78223082 - Gmet_1875 - Ham1-like protein 1855 53.84 0 2091189..2091905 - 238 78223083 - Gmet_1876 - ribonuclease PH 1856 49.49 -1 2091990..2093072 - 360 78223084 - Gmet_1877 - phosphoesterase, RecJ-like 1857 49.05 -1 2093445..2094023 - 192 78223085 - Gmet_1878 - DNA uptake protein and related DNA-binding proteins-like 1858 53.81 0 2094020..2095606 - 528 78223086 - Gmet_1879 - alpha-isopropylmalate/homocitrate synthase family transferase 1859 54.27 0 2095712..2096929 - 405 78223087 - Gmet_1880 - aspartate kinase 1860 49.69 -1 2096987..2097469 - 160 78223088 - Gmet_1881 - hypothetical protein 1861 51.11 -1 2097476..2097925 - 149 78223089 - Gmet_1882 - CBS domain-containing protein 1862 59.81 0 2097946..2099490 - 514 78223090 - Gmet_1883 - hypothetical protein 1863 54.86 0 2099487..2099867 - 126 78223091 - Gmet_1884 - phosphopantethiene-protein transferase 1864 58.75 0 2099875..2100594 - 239 78223092 - Gmet_1885 - pyridoxal phosphate biosynthetic protein PdxJ 1865 58.41 0 2100595..2101950 - 451 78223093 - Gmet_1886 - phosphoglucosamine mutase 1866 55.39 0 2101974..2102381 - 135 78223094 - Gmet_1887 - hypothetical protein 1867 54.95 0 2102366..2103133 - 255 78223095 - Gmet_1888 - hypothetical protein 1868 58.88 0 2103196..2104068 - 290 78223096 - Gmet_1889 - dihydropteroate synthase 1869 58.46 0 2104068..2105894 - 608 78223097 - Gmet_1890 - FtsH peptidase 1870 60.20 0 2105996..2107402 - 468 78223098 - Gmet_1891 - tRNA(Ile)-lysidine synthetase-like 1871 63.47 0 2107631..2109415 - 594 78223099 - Gmet_1892 - DNA helicase/exodeoxyribonuclease V, alpha subunit 1872 63.78 0 2109402..2113004 - 1200 78223100 - Gmet_1893 - DNA helicase/exodeoxyribonuclease V, beta subunit 1873 66.95 +1 2113008..2116190 - 1060 78223101 - Gmet_1894 - exodeoxyribonuclease V, RecC subunit 1874 51.21 -1 2116507..2116959 + 150 78223102 - Gmet_1895 - MarR family transcriptional regulator 1875 56.51 0 2116956..2118314 + 452 78223103 - Gmet_1896 - dihydrolipoamide dehydrogenase 1876 57.67 0 2118509..2118886 + 125 78223104 - Gmet_1897 - phosphoribosyl-AMP cyclohydrolase 1877 63.24 0 2118883..2119758 + 291 78223105 hisG Gmet_1898 - ATP phosphoribosyltransferase 1878 58.36 0 2119820..2120614 - 264 78223106 - Gmet_1899 - ABC transporter-related protein 1879 59.29 0 2120611..2121369 - 252 78223107 - Gmet_1900 - binding-protein dependent transport system inner membrane protein 1880 57.45 0 2121374..2122339 - 321 78223108 - Gmet_1901 - twin-arginine translocation pathway signal 1881 65.47 +1 2122357..2124366 - 669 78223109 - Gmet_1902 - carbon-monoxide dehydrogenase, catalytic subunit 1882 66.28 +1 2124732..2125763 - 343 78223110 - Gmet_1903 - sulphate transport system permease protein 1 1883 64.28 0 2125799..2126635 - 278 78223111 - Gmet_1904 - Sulfate ABC transporter, permease protein CysW 1884 66.07 +1 2126651..2127487 - 278 78223112 - Gmet_1905 - Sulfate ABC transporter, permease protein CysT 1885 62.82 0 2127648..2128661 - 337 78223113 - Gmet_1906 - thiosulphate-binding protein 1886 59.31 0 2128730..2129191 - 153 78223114 - Gmet_1907 - BadM/Rrf2 family transcriptional regulator 1887 52.99 -1 2129505..2129972 - 155 78223115 - Gmet_1908 - bacterioferritin 1888 55.47 0 2130203..2130595 + 130 78223116 - Gmet_1909 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1889 56.07 0 2130608..2131447 - 279 78223117 - Gmet_1910 - ribonucleotide reductase large subunit 1890 55.65 0 2131606..2132304 - 232 78223118 - Gmet_1911 - ribonucleotide reductase large subunit 1891 60.73 0 2132484..2135027 - 847 78223119 - Gmet_1912 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1892 60.06 0 2135237..2136478 - 413 78223120 hisS Gmet_1913 - histidyl-tRNA synthetase 1893 52.97 -1 2136521..2137900 - 459 78223121 - Gmet_1914 - response regulator receiver modulated diguanylate cyclase 1894 58.91 0 2137982..2140378 - 798 78223122 - Gmet_1915 - DNA internalization-related competence protein ComEC/Rec2 1895 57.39 0 2140387..2141583 - 398 78223123 - Gmet_1916 - hypothetical protein 1896 54.21 0 2141788..2143047 + 419 78223124 - Gmet_1917 - response regulator receiver /GGDEF/PAS/PAC domain-containing protein 1897 53.61 -1 2143212..2145164 + 650 78223125 - Gmet_1918 - PAS/PAC sensor hybrid histidine kinase 1898 56.41 0 2145182..2146234 + 350 78223126 - Gmet_1919 - response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 1899 54.81 0 2146376..2146645 - 89 78223127 - Gmet_1920 - hypothetical protein 1900 54.07 0 2146675..2147619 - 314 78223128 - Gmet_1921 - fructose-1,6-bisphosphatase 1901 55.00 0 2147788..2148207 + 139 78223129 - Gmet_1922 - Rieske (2Fe-2S) region 1902 56.61 0 2148215..2149318 + 367 78223130 - Gmet_1923 - cytochrome b/b6-like 1903 54.37 0 2149315..2150127 + 270 78223131 - Gmet_1924 - cytochrome c family protein 1904 52.83 -1 2150280..2150597 + 105 78223132 - Gmet_1925 - hypothetical protein 1905 59.58 0 2150730..2152409 - 559 78223133 - Gmet_1926 - putative ABC transporter ATP-binding protein 1906 61.20 0 2152560..2153528 + 322 78223134 - Gmet_1927 - import inner membrane translocase, subunit Tim44 1907 50.20 -1 2153688..2154185 + 165 78223135 - Gmet_1928 - rubrerythrin 1908 60.16 0 2154276..2155304 - 342 78223136 - Gmet_1929 - cytochrome bd ubiquinol oxidase, subunit II 1909 57.28 0 2155306..2156658 - 450 78223137 - Gmet_1930 - cytochrome bd ubiquinol oxidase, subunit I 1910 58.58 0 2156815..2157222 - 135 78223138 - Gmet_1931 - BadM/Rrf2 family transcriptional regulator 1911 58.16 0 2157306..2158586 - 426 78223139 - Gmet_1932 - peptidase M, neutral zinc metallopeptidase, zinc-binding site 1912 59.86 0 2158593..2158886 - 97 78223140 - Gmet_1933 - heat shock protein DnaJ-like 1913 62.67 0 2158962..2160839 - 625 78223141 - Gmet_1934 - 1-deoxy-D-xylulose-5-phosphate synthase 1914 60.63 0 2160839..2161732 - 297 78223142 - Gmet_1935 - farnesyl-diphosphate synthase 1915 52.81 -1 2161777..2162007 - 76 78223143 - Gmet_1936 - exodeoxyribonuclease VII small subunit 1916 60.77 0 2162062..2162739 - 225 78223144 - Gmet_1937 - hypothetical protein 1917 61.75 0 2162802..2163350 - 182 78223145 - Gmet_1938 - orotate phosphoribosyltransferase 1918 61.96 0 2163368..2164768 - 466 78223146 - Gmet_1939 - amidophosphoribosyltransferase 1919 60.51 0 2164828..2165655 - 275 78223147 - Gmet_1940 - phosphoribosylformylglycinamidine synthase I, putative 1920 62.99 0 2165657..2168647 - 996 78223148 - Gmet_1941 - phosphoribosylformylglycinamidine synthase II 1921 57.53 0 2168648..2169730 - 360 78223149 - Gmet_1942 - MscS mechanosensitive ion channel 1922 59.18 0 2169723..2171018 - 431 78223150 - Gmet_1943 - adenylosuccinate lyase 1923 57.89 0 2171092..2171877 - 261 78223151 - Gmet_1944 - Beta-lactamase-like 1924 49.59 -1 2171991..2174063 - 690 78223152 - Gmet_1945 - PAS/PAC sensor signal transduction histidine kinase 1925 54.92 0 2174289..2175284 + 331 78223153 - Gmet_1946 - glyceraldehyde-3-phosphate dehydrogenase 1926 54.89 0 2175397..2176593 + 398 78223154 - Gmet_1947 - phosphoglycerate kinase 1927 50.66 -1 2176614..2177369 + 251 78223155 - Gmet_1948 - triosephosphate isomerase 1928 55.30 0 2177454..2177849 + 131 78223156 secG Gmet_1949 - preprotein translocase subunit SecG 1929 46.53 -2 2178332..2178634 - 100 78223157 - Gmet_1950 - hypothetical protein 1930 47.62 -2 2178872..2179060 + 62 78223158 - Gmet_1951 - hypothetical protein 1931 55.22 0 2179075..2179668 - 197 78223159 - Gmet_1952 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1932 56.05 0 2179681..2180292 - 203 78223160 - Gmet_1953 - lytic transglycosylase, catalytic 1933 56.64 0 2180498..2182093 + 531 78223161 - Gmet_1954 - L-aspartate oxidase 1934 58.59 0 2182106..2182402 + 98 78223162 - Gmet_1955 - chorismate mutase 1935 53.33 -1 2182402..2182611 + 69 78223163 - Gmet_1956 - hypothetical protein 1936 58.71 0 2182661..2183464 - 267 78223164 - Gmet_1957 - hypothetical protein 1937 55.95 0 2183532..2184119 - 195 78223165 - Gmet_1958 - condensin subunit ScpB 1938 56.80 0 2184106..2184906 - 266 78223166 - Gmet_1959 - condensin subunit ScpA 1939 59.98 0 2184903..2185889 - 328 78223167 - Gmet_1960 - tryptophanyl-tRNA synthetase 1940 56.39 0 2185921..2186601 - 226 78223168 - Gmet_1961 - peptidase M50 1941 56.28 0 2186902..2189655 + 917 78223169 - Gmet_1962 - hypothetical protein 1942 61.67 0 2189630..2190529 + 299 78223170 - Gmet_1963 - putative signal peptide protein 1943 59.89 0 2190526..2193360 + 944 78223171 - Gmet_1964 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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