version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1274 55.06 0 1447823..1448089 + 88 78222502 - Gmet_1288 - HPrNtr 1275 57.44 0 1448070..1449836 + 588 78222503 - Gmet_1289 - phosphoenolpyruvate--protein phosphotransferase 1276 61.28 0 1449945..1451114 + 389 78222504 - Gmet_1290 - S-adenosylmethionine synthetase 1277 60.58 0 1451204..1451926 - 240 78222505 - Gmet_1291 - two component transcriptional regulator 1278 59.16 0 1451923..1452948 - 341 78222506 - Gmet_1292 - histidine kinase 1279 59.76 0 1453010..1454095 + 361 78222507 - Gmet_1293 - 2-nitropropane dioxygenase, NPD 1280 62.82 0 1454255..1455685 + 476 78222508 - Gmet_1294 - S-adenosyl-L-homocysteine hydrolase 1281 61.94 0 1455763..1457601 - 612 78222509 - Gmet_1295 - peptidase M3B, oligoendopeptidase-related clade 3 1282 63.74 0 1457674..1457946 + 90 78222510 - Gmet_1296 - Smr protein/MutS2-like 1283 63.57 0 1458039..1460267 - 742 78222511 - Gmet_1297 - ribonucleotide-diphosphate reductase subunit alpha 1284 56.97 0 1460524..1461585 + 353 78222512 - Gmet_1298 - diguanylate cyclase with GAF sensor 1285 62.26 0 1461582..1462919 + 445 78222513 - Gmet_1299 - putative lipoprotein 1286 64.83 0 1462945..1464090 + 381 78222514 - Gmet_1300 - cysteine desulphurase-like protein 1287 55.19 0 1464167..1464436 + 89 78222515 - Gmet_1301 - hypothetical protein 1288 59.70 0 1464504..1465823 + 439 78222516 - Gmet_1302 - PhoH-like protein 1289 65.50 +1 1465823..1466848 + 341 78222517 - Gmet_1303 - O-sialoglycoprotein endopeptidase 1290 61.11 0 1466845..1467672 + 275 78222518 ksgA Gmet_1304 - dimethyladenosine transferase 1291 56.69 0 1467726..1468226 - 166 78222519 - Gmet_1305 - MucR family transcriptional regulator 1292 53.05 -1 1468408..1468620 + 70 78222520 - Gmet_1306 - 2-oxoglutarate ferredoxin oxidoreductase, delta subunit 1293 61.95 0 1468719..1469777 + 352 78222521 - Gmet_1307 - 2-ketoisovalerate ferredoxin reductase 1294 60.75 0 1469855..1470598 + 247 78222522 - Gmet_1308 - thiamine pyrophosphate enzyme, C-terminal TPP-binding 1295 56.76 0 1470641..1471195 + 184 78222523 - Gmet_1309 - pyruvate ferredoxin/flavodoxin oxidoreductase 1296 55.23 0 1471606..1472829 + 407 78222524 - Gmet_1310 - IS204/IS1001/IS1096/IS1165 transposase 1297 56.69 0 1473046..1474128 + 360 78222525 - Gmet_1311 - GDP-mannose 4,6-dehydratase 1298 55.28 0 1474121..1475086 + 321 78222526 - Gmet_1312 - NAD-dependent epimerase/dehydratase 1299 58.96 0 1475099..1475500 + 133 78222527 - Gmet_1313 - hypothetical protein 1300 52.21 -1 1475490..1475918 + 142 78222528 - Gmet_1314 - hypothetical protein 1301 53.25 -1 1475970..1477139 - 389 78222529 - Gmet_1315 - transposase IS4 1302 46.98 -2 1477315..1477761 + 148 78222530 - Gmet_1316 - nucleotidyltransferase 1303 44.12 -2 1477761..1478177 + 138 78222531 - Gmet_1317 - hypothetical protein 1304 53.99 0 1478531..1478806 + 91 78222532 - Gmet_1319 - hypothetical protein 1305 42.68 -2 1478842..1479162 + 106 78222533 - Gmet_1320 - DNA polymerase, beta-like region 1306 45.45 -2 1479367..1479597 + 76 78222534 - Gmet_1321 - hypothetical protein 1307 49.35 -1 1479599..1479829 + 76 78222535 - Gmet_1322 - YcfA-like 1308 53.33 -1 1479851..1480075 + 74 78222536 - Gmet_1323 - hypothetical protein 1309 49.46 -1 1480322..1481251 + 309 78222537 - Gmet_1324 - WxcM-like protein 1310 46.07 -2 1481248..1482354 + 368 78222538 - Gmet_1325 - DegT/DnrJ/EryC1/StrS aminotransferase 1311 40.90 -2 1482351..1483619 + 422 78222539 - Gmet_1326 - lipopolysaccharide biosynthesis protein 1312 29.21 -2 1483641..1484876 + 411 78222540 - Gmet_1327 - hypothetical protein 1313 40.00 -2 1485079..1485963 + 294 78222541 - Gmet_1328 - glycosyl transferase family protein 1314 36.29 -2 1485942..1487294 + 450 78222542 - Gmet_1329 - hypothetical protein 1315 29.31 -2 1487369..1488487 + 372 78222543 - Gmet_1330 - hypothetical protein 1316 32.69 -2 1488513..1489592 + 359 78222544 - Gmet_1331 - hypothetical protein 1317 33.23 -2 1489652..1490641 + 329 78222545 - Gmet_1332 - hypothetical protein 1318 53.59 -1 1490891..1492144 + 417 78222546 - Gmet_1333 - IS204/IS1001/IS1096/IS1165 transposase 1319 38.10 -2 1492253..1493155 + 300 78222547 - Gmet_1334 - glycosyl transferase family protein 1320 51.52 -1 1493177..1494193 + 338 78222548 - Gmet_1335 - NAD-dependent epimerase/dehydratase 1321 54.85 0 1494288..1495472 + 394 78222549 - Gmet_1336 - hypothetical protein 1322 52.58 -1 1495498..1496058 + 186 78222550 - Gmet_1337 - sugar transferase 1323 57.91 0 1496100..1498040 + 646 78222551 - Gmet_1338 - polysaccharide biosynthesis protein CapD 1324 55.19 0 1498144..1498413 + 89 78222552 - Gmet_1339 - AbrB family transcriptional regulator 1325 50.85 -1 1498389..1498799 + 136 78222553 - Gmet_1340 - PilT protein-like 1326 61.79 0 1499016..1500695 + 559 78222554 - Gmet_1341 - hypothetical protein 1327 62.86 0 1500964..1502382 - 472 78222555 - Gmet_1343 - Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase 1328 62.68 0 1502588..1503865 + 425 78222556 - Gmet_1344 - polysaccharide export protein 1329 63.56 0 1503856..1505562 + 568 78222557 - Gmet_1345 - polysaccharide biosynthesis/export domain-containing protein 1330 59.45 0 1505575..1506780 + 401 78222558 - Gmet_1346 - lipopolysaccharide biosynthesis 1331 63.36 0 1506811..1507989 + 392 78222559 - Gmet_1347 - phosphoesterase, PA-phosphatase related 1332 62.85 0 1508061..1508741 + 226 78222560 - Gmet_1348 - HAD family hydrolase 1333 66.71 +1 1508874..1511402 + 842 78222561 - Gmet_1349 - ATP-dependent helicase HrpB 1334 62.10 0 1511428..1512150 - 240 78222562 - Gmet_1350 - peptidase M23B 1335 57.52 0 1512484..1512822 + 112 78222563 - Gmet_1351 - nitrogen regulatory protein P-II 1336 59.59 0 1512872..1514284 + 470 78222564 - Gmet_1352 - L-glutamine synthetase 1337 63.48 0 1514414..1515481 + 355 78222565 - Gmet_1353 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1338 61.59 0 1515493..1517205 + 570 78222566 - Gmet_1354 - prolyl-tRNA synthetase 1339 60.42 0 1517233..1517952 + 239 78222567 - Gmet_1355 - orotidine-5'-phosphate decarboxylase 1340 60.16 0 1517972..1518724 + 250 78222568 - Gmet_1356 - RNA methyltransferase TrmH, group 3 1341 53.67 -1 1519234..1521018 + 594 78222569 aspS Gmet_1357 - aspartyl-tRNA synthetase 1342 55.56 0 1521033..1521725 + 230 78222570 - Gmet_1358 - peptidoglycan-binding LysM 1343 52.41 -1 1521978..1524200 + 740 78222571 - Gmet_1359 - isocitrate dehydrogenase NADP-dependent, monomeric type 1344 54.09 0 1524251..1525204 + 317 78222572 - Gmet_1360 - malate dehydrogenase (NAD) 1345 47.69 -2 1525401..1525595 + 64 78222573 - Gmet_1361 - Iron-sulfur cluster-binding protein 1346 56.00 0 1525620..1526753 + 377 78222574 - Gmet_1362 - 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1347 55.80 0 1526756..1527574 + 272 78222575 - Gmet_1363 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1348 53.55 -1 1527605..1528153 + 182 78222576 - Gmet_1364 - 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit 1349 51.50 -1 1528304..1529470 + 388 78222577 - Gmet_1365 - metal dependent phosphohydrolase 1350 54.68 0 1529556..1530506 + 316 78222578 - Gmet_1366 - hypothetical protein 1351 53.39 -1 1530546..1531283 + 245 78222579 - Gmet_1367 - hypothetical protein 1352 55.87 0 1531365..1532003 + 212 78222580 - Gmet_1368 - hypothetical protein 1353 61.45 0 1532028..1532774 + 248 78222581 - Gmet_1369 - RNA methyltransferase TrmH, group 1 1354 60.38 0 1532771..1533088 + 105 78222582 - Gmet_1370 - hypothetical protein 1355 60.17 0 1533085..1533669 + 194 78222583 - Gmet_1371 - hypothetical protein 1356 65.52 +1 1533681..1534553 + 290 78222584 - Gmet_1372 - hypothetical protein 1357 62.74 0 1534575..1535210 + 211 78222585 - Gmet_1373 - hypothetical protein 1358 60.94 0 1535207..1536760 - 517 78222586 - Gmet_1374 - EmrB/QacA family drug resistance transporter 1359 64.89 0 1536773..1537897 - 374 78222587 - Gmet_1375 - secretion protein HlyD 1360 62.92 0 1537900..1539207 - 435 78222588 - Gmet_1376 - Outer membrane efflux protein 1361 63.33 0 1539404..1541563 - 719 78222589 - Gmet_1377 - lytic transglycosylase, catalytic 1362 54.70 0 1541771..1542430 - 219 78222590 - Gmet_1378 - response regulator receiver domain-containing protein 1363 52.13 -1 1542427..1544166 - 579 78222591 - Gmet_1379 - histidine kinase 1364 56.61 0 1544746..1545411 + 221 78222592 - Gmet_1380 - DSBA oxidoreductase 1365 58.62 0 1545438..1546133 + 231 78222593 - Gmet_1381 - putative disulfide oxidoreductase 1366 56.87 0 1546191..1548068 + 625 78222594 - Gmet_1382 - arylsulfotransferase 1367 62.33 0 1548165..1548671 + 168 78222595 - Gmet_1383 - thioredoxin family protein 1368 58.27 0 1548685..1549434 + 249 78222596 - Gmet_1384 - cytochrome c biogenesis protein, transmembrane region 1369 56.50 0 1549548..1550462 + 304 78222597 - Gmet_1385 - hypothetical protein 1370 64.78 0 1550693..1552972 + 759 78222598 - Gmet_1386 - 3'-5' exoribonuclease, VacB and RNase II:ribonuclease R 1371 59.58 0 1553226..1554086 + 286 78222599 - Gmet_1387 - Sec-independent periplasmic protein translocase 1372 61.09 0 1554093..1555061 + 322 78222600 - Gmet_1388 - riboflavin kinase / FMN adenylyltransferase 1373 63.40 0 1555058..1556068 + 336 78222601 - Gmet_1389 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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