version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1052 66.11 +1 1182355..1183794 + 479 78222280 - Gmet_1062 - formate dehydrogenase, subunit FdhD 1053 56.28 0 1183845..1184027 + 60 78222281 - Gmet_1063 - Sec-independent protein translocase TatA 1054 57.81 0 1184266..1186434 + 722 78222282 - Gmet_1064 - metal dependent phosphohydrolase 1055 60.38 0 1186583..1187266 + 227 78222283 - Gmet_1065 - CRISPR-associated Csd1 family protein 1056 56.05 0 1187263..1189023 + 586 78222284 - Gmet_1066 - CRISPR-associated Csd1 family protein 1057 56.26 0 1189036..1189890 + 284 78222285 - Gmet_1067 - CRISPR-associated Csh2 family protein 1058 51.11 -1 1190026..1190565 + 179 78222286 - Gmet_1068 - hypothetical protein 1059 58.40 0 1190735..1191811 - 358 78222287 - Gmet_1069 - transposase IS4 1060 59.02 0 1191984..1192598 + 204 78222288 - Gmet_1070 - hypothetical protein 1061 57.11 0 1192609..1193445 + 278 78222289 - Gmet_1071 - hypothetical protein 1062 61.84 0 1193442..1194476 + 344 78222290 - Gmet_1072 - hypothetical protein 1063 53.74 0 1194577..1194870 + 97 78222291 - Gmet_1073 - hypothetical protein 1064 63.49 0 1196151..1196654 + 167 78222292 - Gmet_1074 - nitroreductase 1065 64.47 0 1196661..1197752 - 363 78222293 - Gmet_1075 - chemotaxis-specific methylesterase 1066 61.82 0 1197749..1198285 - 178 78222294 - Gmet_1076 - CheD, stimulates methylation of MCP proteins 1067 66.33 +1 1198306..1199208 - 300 78222295 - Gmet_1077 - MCP methyltransferase, CheR-type 1068 64.00 0 1199218..1200981 - 587 78222296 - Gmet_1078 - methyl-accepting chemotaxis sensory transducer 1069 60.93 0 1201010..1201480 - 156 78222297 - Gmet_1079 - CheW protein 1070 65.01 0 1201507..1203555 - 682 78222298 - Gmet_1080 - CheA signal transduction histidine kinase 1071 64.29 0 1203552..1203887 - 111 78222299 - Gmet_1081 - hypothetical protein 1072 62.16 0 1204135..1205553 - 472 78222300 - Gmet_1082 - two component, sigma54 specific, Fis family transcriptional regulator 1073 59.07 0 1205546..1208506 - 986 78222301 - Gmet_1083 - PAS/PAC sensor signal transduction histidine kinase 1074 66.55 +1 1208627..1209520 - 297 78222302 - Gmet_1084 - LysR family transcriptional regulator 1075 62.27 0 1209663..1210253 + 196 78222303 - Gmet_1085 - hypothetical protein 1076 63.03 0 1210274..1211290 + 338 78222304 - Gmet_1086 - transglutaminase-like 1077 60.85 0 1211375..1211821 - 148 78222305 - Gmet_1087 - cytochrome c family protein, putative 1078 60.88 0 1212322..1212753 - 143 78222306 - Gmet_1088 - cytochrome c, class I 1079 65.10 0 1212839..1213987 - 382 78222307 - Gmet_1089 - Na+/H+ antiporter NhaA 1080 65.39 +1 1214079..1214861 - 260 78222308 - Gmet_1090 - trehalose-phosphatase, putative 1081 61.86 0 1215118..1215471 - 117 78222309 - Gmet_1091 - hypothetical protein 1082 60.44 0 1215573..1216472 - 299 78222310 - Gmet_1092 - polyphosphate:AMP phosphotransferase 1083 63.54 0 1216641..1217600 + 319 78222311 - Gmet_1093 - hypothetical protein 1084 62.27 0 1217699..1219108 - 469 78222312 - Gmet_1094 - cytochrome c Hsc 1085 53.83 0 1219435..1219917 + 160 78222313 - Gmet_1095 - rubrerythrin 1086 61.68 0 1220010..1220390 - 126 78222314 - Gmet_1096 - hypothetical protein 1087 66.67 +1 1220836..1221627 - 263 78222315 - Gmet_1097 - hypothetical protein 1088 58.37 0 1221630..1222244 - 204 78222316 - Gmet_1098 - hypothetical protein 1089 68.67 +1 1222406..1223503 + 365 78222317 - Gmet_1099 - L-alanine dehydrogenase 1090 63.68 0 1223518..1223751 + 77 78222318 - Gmet_1100 - hypothetical protein 1091 60.31 0 1223810..1225336 + 508 78222319 - Gmet_1101 - hypothetical protein 1092 63.10 0 1225466..1226671 + 401 78222320 rpsA Gmet_1102 - 30S ribosomal protein S1 1093 65.23 0 1226672..1227157 + 161 78222321 - Gmet_1103 - GreA/GreB family elongation factor 1094 65.64 +1 1227267..1228340 + 357 78222322 - Gmet_1104 - mannose-1-phosphate guanylyltransferase (GDP) 1095 63.10 0 1228340..1230358 + 672 78222323 - Gmet_1105 - Sodium/hydrogen exchanger 1096 62.85 0 1230385..1230855 + 156 78222324 - Gmet_1106 - flavodoxin/nitric oxide synthase 1097 67.82 +1 1230855..1231463 + 202 78222325 - Gmet_1107 - metal dependent phosphohydrolase 1098 59.00 0 1231475..1231813 + 112 78222326 - Gmet_1108 - hypothetical protein 1099 63.43 0 1231882..1232499 + 205 78222327 - Gmet_1109 - bidirectional hydrogenase complex protein HoxE 1100 69.06 +1 1232496..1234205 + 569 78222328 - Gmet_1110 - respiratory-chain NADH dehydrogenase domain-containing protein 1101 67.78 +1 1234205..1234921 + 238 78222329 - Gmet_1111 - bidirectional hydrogenase complex protein HoxU 1102 65.38 +1 1234934..1235476 + 180 78222330 - Gmet_1112 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1103 66.95 +1 1235484..1236914 + 476 78222331 - Gmet_1113 - nickel-dependent hydrogenase, large subunit 1104 40.53 -2 1237343..1238065 + 240 78222332 - Gmet_1114 - hypothetical protein 1105 50.36 -1 1238150..1238701 + 183 78222333 - Gmet_1115 - hypothetical protein 1106 58.49 0 1239014..1239808 - 264 78222334 - Gmet_1117 - transposase/IS protein 1107 58.09 0 1239805..1240830 - 341 78222335 - Gmet_1118 - integrase catalytic subunit 1108 50.60 -1 1241022..1241270 - 82 78222336 - Gmet_1120 - hypothetical protein 1109 56.03 0 1241345..1242049 + 234 78222337 - Gmet_1121 - GntR family transcriptional regulator 1110 61.75 0 1242042..1242956 + 304 78222338 prpB Gmet_1122 - 2-methylisocitrate lyase 1111 63.28 0 1242953..1244398 + 481 78222339 prpD Gmet_1123 - 2-methylcitrate dehydratase 1112 59.98 0 1244476..1245792 + 438 78222340 - Gmet_1124 - type I citrate synthase 1113 60.40 0 1245850..1247445 + 531 78222341 - Gmet_1125 - Acetyl-CoA hydrolase/transferase 1114 56.54 0 1247476..1248087 + 203 78222342 - Gmet_1126 - GPR1/FUN34/yaaH 1115 66.52 +1 1248277..1248975 - 232 78222343 - Gmet_1127 - sugar fermentation stimulation protein 1116 65.47 +1 1249212..1251128 + 638 78222344 - Gmet_1128 - Phage tail sheath protein 1117 61.18 0 1251141..1251650 + 169 78222345 - Gmet_1129 - hypothetical protein 1118 70.63 +1 1251650..1252456 + 268 78222346 - Gmet_1130 - hypothetical protein 1119 64.74 0 1252473..1253510 + 345 78222347 - Gmet_1131 - hypothetical protein 1120 69.28 +1 1253512..1254546 + 344 78222348 - Gmet_1132 - hypothetical protein 1121 70.93 +1 1254546..1255883 + 445 78222349 - Gmet_1133 - AAA ATPase, central region 1122 67.09 +1 1255877..1256110 + 77 78222350 - Gmet_1134 - hypothetical protein 1123 68.08 +1 1256115..1256753 + 212 78222351 - Gmet_1135 - hypothetical protein 1124 65.29 0 1256755..1257045 + 96 78222352 - Gmet_1136 - hypothetical protein 1125 69.11 +1 1257049..1258194 + 381 78222353 - Gmet_1137 - hypothetical protein 1126 66.54 +1 1258195..1259007 + 270 78222354 - Gmet_1138 - hypothetical protein 1127 66.40 +1 1259189..1259563 + 124 78222355 - Gmet_1139 - hypothetical protein 1128 68.62 +1 1259568..1260743 + 391 78222356 - Gmet_1140 - hypothetical protein 1129 69.15 +1 1260740..1264006 + 1088 78222357 - Gmet_1141 - hypothetical protein 1130 67.99 +1 1264019..1265527 + 502 78222358 - Gmet_1142 - hypothetical protein 1131 52.87 -1 1265809..1266765 + 318 78222359 - Gmet_1143 - IS111A/IS1328/IS1533/IS116/IS110/IS902 transposase 1132 66.44 +1 1266831..1269893 + 1020 78222360 - Gmet_1144 - hypothetical protein 1133 63.66 0 1269960..1270922 + 320 78222361 - Gmet_1145 - hypothetical protein 1134 59.81 0 1270978..1271706 + 242 78222362 - Gmet_1146 - response regulator receiver domain-containing protein 1135 61.19 0 1271841..1274231 + 796 78222363 - Gmet_1147 - hypothetical protein 1136 63.72 0 1274295..1275650 - 451 78222364 - Gmet_1148 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1137 52.78 -1 1275807..1276094 - 95 78222365 - Gmet_1149 - hypothetical protein 1138 56.72 0 1276759..1277562 + 267 78222366 - Gmet_1150 - hypothetical protein 1139 57.95 0 1277585..1278307 + 240 78222367 - Gmet_1151 - rhomboid-like protein 1140 56.01 0 1278313..1278678 - 121 78222368 - Gmet_1152 - putative lipoprotein 1141 57.96 0 1278894..1280237 + 447 78222369 - Gmet_1153 - hypothetical protein 1142 59.33 0 1280246..1281322 + 358 78222370 - Gmet_1154 - hypothetical protein 1143 55.02 0 1281365..1282300 - 311 78222371 - Gmet_1155 - integral membrane protein TerC 1144 62.96 0 1282375..1283238 - 287 78222372 - Gmet_1156 - HtpX-2 peptidase 1145 59.41 0 1283626..1284204 + 192 78222373 - Gmet_1157 - hypothetical protein 1146 61.41 0 1284271..1285164 + 297 78222374 - Gmet_1158 - TonB-like 1147 60.27 0 1285171..1286046 - 291 78222375 - Gmet_1159 - UDP-glucose pyrophosphorylase 1148 63.44 0 1286075..1286974 - 299 78222376 - Gmet_1160 - methylenetetrahydrofolate reductase 1149 63.27 0 1286971..1287618 - 215 78222377 - Gmet_1161 - hypothetical protein 1150 60.61 0 1287679..1288536 - 285 78222378 - Gmet_1162 - methenyltetrahydrofolate cyclohydrolase 1151 59.92 0 1288718..1288969 - 83 78222379 - Gmet_1163 - hypothetical protein 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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