version 1.0
Geobacter metallireducens GS-15, complete genome - 1..3997420 3519 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1014 58.75 0 1139699..1140481 + 260 78222242 - Gmet_1022 - respiratory nitrate reductase gamma subunit 1015 57.11 0 1141029..1141436 + 135 78222243 - Gmet_1024 - hypothetical protein 1016 56.75 0 1141478..1141840 + 120 78222244 - Gmet_1025 - hypothetical protein 1017 56.44 0 1141939..1142613 + 224 78222245 - Gmet_1026 - two component transcriptional regulator 1018 56.49 0 1142610..1144043 + 477 78222246 - Gmet_1027 - histidine kinase 1019 56.67 0 1144774..1145223 + 149 78222247 - Gmet_1029 - hypothetical protein 1020 57.36 0 1145481..1146329 + 282 78222248 - Gmet_1030 - metallo-beta-lactamase family protein 1021 53.59 -1 1146339..1147034 - 231 78222249 - Gmet_1031 - hypothetical protein 1022 57.24 0 1147230..1148735 + 501 78222250 - Gmet_1032 - Zinc finger/thioredoxin putative 1023 53.33 -1 1148853..1149077 - 74 78222251 - Gmet_1033 - 4Fe-4S ferredoxin, iron-sulfur binding protein 1024 56.79 0 1149287..1150552 + 421 78222252 - Gmet_1034 - acetate kinase 1025 63.77 0 1150703..1151704 - 333 78222253 - Gmet_1035 - phosphotransacetylase 1026 67.48 +1 1151824..1152315 - 163 78222254 - Gmet_1036 - molybdopterin adenylyltransferase 1027 66.46 +1 1152312..1152794 - 160 78222255 - Gmet_1037 - GTP cyclohydrolase subunit MoaC 1028 67.16 +1 1152809..1154026 - 405 78222256 - Gmet_1038 - molybdopterin molybdochelatase 1029 66.26 +1 1153981..1154724 - 247 78222257 - Gmet_1039 - ABC transporter-related protein 1030 65.65 +1 1154731..1155417 - 228 78222258 - Gmet_1040 - binding-protein dependent transport system inner membrane protein 1031 60.37 0 1155472..1156281 - 269 78222259 - Gmet_1041 - extracellular solute-binding protein 1032 60.32 0 1156444..1157688 - 414 78222260 - Gmet_1042 - phosphate-selective porin O and P 1033 64.77 0 1158038..1158880 - 280 78222261 - Gmet_1043 - UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB 1034 60.00 0 1158882..1159106 - 74 78222262 - Gmet_1044 - thiamine S 1035 64.70 0 1159181..1160911 - 576 78222263 - Gmet_1045 - aldehyde ferredoxin oxidoreductase 1036 65.21 0 1161195..1162358 - 387 78222264 - Gmet_1046 - Iron-containing alcohol dehydrogenase 1037 58.22 0 1162870..1163094 + 74 78222265 - Gmet_1047 - CopG-like DNA-binding protein 1038 50.49 -1 1163682..1165523 - 613 78222266 - Gmet_1048 - hypothetical protein 1039 48.37 -1 1165608..1166558 - 316 78222267 - Gmet_1049 - hypothetical protein 1040 58.33 0 1166724..1167191 - 155 78222268 - Gmet_1050 - hypothetical protein 1041 55.37 0 1167261..1167623 - 120 78222269 - Gmet_1051 - hypothetical protein 1042 48.04 -1 1167620..1167925 - 101 78222270 - Gmet_1052 - hypothetical protein 1043 65.01 0 1168240..1169388 + 382 78222271 - Gmet_1053 - Iron-containing alcohol dehydrogenase 1044 60.22 0 1169529..1171187 + 552 78222272 - Gmet_1054 - GAF sensor signal transduction histidine kinase 1045 64.24 0 1171210..1172736 + 508 78222273 - Gmet_1055 - two component, sigma54 specific, Fis family transcriptional regulator 1046 56.68 0 1172992..1173552 - 186 78222274 - Gmet_1056 - hypothetical protein 1047 65.18 0 1173596..1175617 - 673 78222275 - Gmet_1057 - histidine kinase 1048 65.23 0 1175618..1177006 - 462 78222276 - Gmet_1058 - two component, sigma54 specific, Fis family transcriptional regulator 1049 63.70 0 1177284..1180316 + 1010 78222277 - Gmet_1059 - formate dehydrogenase alpha subunit 1050 63.19 0 1180313..1181146 + 277 78222278 - Gmet_1060 - formate dehydrogenase beta subunit 1051 62.44 0 1181143..1182348 + 401 78222279 - Gmet_1061 - polysulphide reductase, NrfD 1052 66.11 +1 1182355..1183794 + 479 78222280 - Gmet_1062 - formate dehydrogenase, subunit FdhD 1053 56.28 0 1183845..1184027 + 60 78222281 - Gmet_1063 - Sec-independent protein translocase TatA 1054 57.81 0 1184266..1186434 + 722 78222282 - Gmet_1064 - metal dependent phosphohydrolase 1055 60.38 0 1186583..1187266 + 227 78222283 - Gmet_1065 - CRISPR-associated Csd1 family protein 1056 56.05 0 1187263..1189023 + 586 78222284 - Gmet_1066 - CRISPR-associated Csd1 family protein 1057 56.26 0 1189036..1189890 + 284 78222285 - Gmet_1067 - CRISPR-associated Csh2 family protein 1058 51.11 -1 1190026..1190565 + 179 78222286 - Gmet_1068 - hypothetical protein 1059 58.40 0 1190735..1191811 - 358 78222287 - Gmet_1069 - transposase IS4 1060 59.02 0 1191984..1192598 + 204 78222288 - Gmet_1070 - hypothetical protein 1061 57.11 0 1192609..1193445 + 278 78222289 - Gmet_1071 - hypothetical protein 1062 61.84 0 1193442..1194476 + 344 78222290 - Gmet_1072 - hypothetical protein 1063 53.74 0 1194577..1194870 + 97 78222291 - Gmet_1073 - hypothetical protein 1064 63.49 0 1196151..1196654 + 167 78222292 - Gmet_1074 - nitroreductase 1065 64.47 0 1196661..1197752 - 363 78222293 - Gmet_1075 - chemotaxis-specific methylesterase 1066 61.82 0 1197749..1198285 - 178 78222294 - Gmet_1076 - CheD, stimulates methylation of MCP proteins 1067 66.33 +1 1198306..1199208 - 300 78222295 - Gmet_1077 - MCP methyltransferase, CheR-type 1068 64.00 0 1199218..1200981 - 587 78222296 - Gmet_1078 - methyl-accepting chemotaxis sensory transducer 1069 60.93 0 1201010..1201480 - 156 78222297 - Gmet_1079 - CheW protein 1070 65.01 0 1201507..1203555 - 682 78222298 - Gmet_1080 - CheA signal transduction histidine kinase 1071 64.29 0 1203552..1203887 - 111 78222299 - Gmet_1081 - hypothetical protein 1072 62.16 0 1204135..1205553 - 472 78222300 - Gmet_1082 - two component, sigma54 specific, Fis family transcriptional regulator 1073 59.07 0 1205546..1208506 - 986 78222301 - Gmet_1083 - PAS/PAC sensor signal transduction histidine kinase 1074 66.55 +1 1208627..1209520 - 297 78222302 - Gmet_1084 - LysR family transcriptional regulator 1075 62.27 0 1209663..1210253 + 196 78222303 - Gmet_1085 - hypothetical protein 1076 63.03 0 1210274..1211290 + 338 78222304 - Gmet_1086 - transglutaminase-like 1077 60.85 0 1211375..1211821 - 148 78222305 - Gmet_1087 - cytochrome c family protein, putative 1078 60.88 0 1212322..1212753 - 143 78222306 - Gmet_1088 - cytochrome c, class I 1079 65.10 0 1212839..1213987 - 382 78222307 - Gmet_1089 - Na+/H+ antiporter NhaA 1080 65.39 +1 1214079..1214861 - 260 78222308 - Gmet_1090 - trehalose-phosphatase, putative 1081 61.86 0 1215118..1215471 - 117 78222309 - Gmet_1091 - hypothetical protein 1082 60.44 0 1215573..1216472 - 299 78222310 - Gmet_1092 - polyphosphate:AMP phosphotransferase 1083 63.54 0 1216641..1217600 + 319 78222311 - Gmet_1093 - hypothetical protein 1084 62.27 0 1217699..1219108 - 469 78222312 - Gmet_1094 - cytochrome c Hsc 1085 53.83 0 1219435..1219917 + 160 78222313 - Gmet_1095 - rubrerythrin 1086 61.68 0 1220010..1220390 - 126 78222314 - Gmet_1096 - hypothetical protein 1087 66.67 +1 1220836..1221627 - 263 78222315 - Gmet_1097 - hypothetical protein 1088 58.37 0 1221630..1222244 - 204 78222316 - Gmet_1098 - hypothetical protein 1089 68.67 +1 1222406..1223503 + 365 78222317 - Gmet_1099 - L-alanine dehydrogenase 1090 63.68 0 1223518..1223751 + 77 78222318 - Gmet_1100 - hypothetical protein 1091 60.31 0 1223810..1225336 + 508 78222319 - Gmet_1101 - hypothetical protein 1092 63.10 0 1225466..1226671 + 401 78222320 rpsA Gmet_1102 - 30S ribosomal protein S1 1093 65.23 0 1226672..1227157 + 161 78222321 - Gmet_1103 - GreA/GreB family elongation factor 1094 65.64 +1 1227267..1228340 + 357 78222322 - Gmet_1104 - mannose-1-phosphate guanylyltransferase (GDP) 1095 63.10 0 1228340..1230358 + 672 78222323 - Gmet_1105 - Sodium/hydrogen exchanger 1096 62.85 0 1230385..1230855 + 156 78222324 - Gmet_1106 - flavodoxin/nitric oxide synthase 1097 67.82 +1 1230855..1231463 + 202 78222325 - Gmet_1107 - metal dependent phosphohydrolase 1098 59.00 0 1231475..1231813 + 112 78222326 - Gmet_1108 - hypothetical protein 1099 63.43 0 1231882..1232499 + 205 78222327 - Gmet_1109 - bidirectional hydrogenase complex protein HoxE 1100 69.06 +1 1232496..1234205 + 569 78222328 - Gmet_1110 - respiratory-chain NADH dehydrogenase domain-containing protein 1101 67.78 +1 1234205..1234921 + 238 78222329 - Gmet_1111 - bidirectional hydrogenase complex protein HoxU 1102 65.38 +1 1234934..1235476 + 180 78222330 - Gmet_1112 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1103 66.95 +1 1235484..1236914 + 476 78222331 - Gmet_1113 - nickel-dependent hydrogenase, large subunit 1104 40.53 -2 1237343..1238065 + 240 78222332 - Gmet_1114 - hypothetical protein 1105 50.36 -1 1238150..1238701 + 183 78222333 - Gmet_1115 - hypothetical protein 1106 58.49 0 1239014..1239808 - 264 78222334 - Gmet_1117 - transposase/IS protein 1107 58.09 0 1239805..1240830 - 341 78222335 - Gmet_1118 - integrase catalytic subunit 1108 50.60 -1 1241022..1241270 - 82 78222336 - Gmet_1120 - hypothetical protein 1109 56.03 0 1241345..1242049 + 234 78222337 - Gmet_1121 - GntR family transcriptional regulator 1110 61.75 0 1242042..1242956 + 304 78222338 prpB Gmet_1122 - 2-methylisocitrate lyase 1111 63.28 0 1242953..1244398 + 481 78222339 prpD Gmet_1123 - 2-methylcitrate dehydratase 1112 59.98 0 1244476..1245792 + 438 78222340 - Gmet_1124 - type I citrate synthase 1113 60.40 0 1245850..1247445 + 531 78222341 - Gmet_1125 - Acetyl-CoA hydrolase/transferase 59.54 MEAN 5.81 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0