version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 453 57.10 0 434858..436258 - 466 189423535 - Glov_0464 - FAD linked oxidase domain protein 454 55.04 0 436363..437772 - 469 189423536 - Glov_0465 - PAS/PAC sensor signal transduction histidine kinase 455 58.35 0 437756..438910 - 384 189423537 - Glov_0466 - iron-containing alcohol dehydrogenase 456 56.60 0 439103..441406 + 767 189423538 - Glov_0467 - transcriptional regulator, Fis family 457 51.37 0 441619..441801 + 60 189423539 - Glov_0468 - hypothetical protein 458 54.17 0 441897..443408 - 503 189423540 - Glov_0469 - ribonuclease, Rne/Rng family 459 57.58 0 443445..445931 - 828 189423541 - Glov_0470 - Radical SAM domain protein 460 57.95 0 446215..447705 - 496 189423542 - Glov_0471 - ammonium transporter 461 51.62 0 447748..448086 - 112 189423543 - Glov_0472 - nitrogen regulatory protein P-II 462 53.67 0 448440..448739 + 99 189423544 - Glov_0473 - Rieske (2Fe-2S) domain protein 463 55.79 0 448726..450177 + 483 189423545 - Glov_0474 - phospholipase D/Transphosphatidylase 464 51.59 0 450276..450872 + 198 189423546 - Glov_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 465 57.49 0 450983..453106 + 707 189423547 - Glov_0476 - DNA polymerase B, exonuclease 466 52.70 0 453160..453381 - 73 189423548 - Glov_0477 - hypothetical protein 467 55.78 0 453627..454508 - 293 189423549 - Glov_0478 - glucose-1-phosphate thymidylyltransferase 468 55.33 0 454533..455546 - 337 189423550 - Glov_0479 - NAD-dependent epimerase/dehydratase 469 59.62 0 455552..456772 - 406 189423551 - Glov_0480 - threonine dehydratase 470 59.34 0 456776..458986 - 736 189423552 - Glov_0481 - UvrD/REP helicase 471 59.63 0 459018..459998 - 326 189423553 - Glov_0482 - pseudouridine synthase, RluA family 472 51.52 0 460077..460340 - 87 189423554 - Glov_0483 - hypothetical protein 473 60.33 +1 460420..461586 - 388 189423555 - Glov_0484 - 2-alkenal reductase 474 54.21 0 461720..462313 + 197 189423556 - Glov_0485 - transcriptional regulator, XRE family 475 57.95 0 462374..463027 - 217 189423557 - Glov_0486 - ThiJ/PfpI domain protein 476 58.39 0 463024..463941 - 305 189423558 - Glov_0487 - NAD-dependent epimerase/dehydratase 477 60.97 +1 464009..464587 + 192 189423559 - Glov_0488 - hypothetical protein 478 58.99 0 464661..466979 + 772 189423560 - Glov_0489 - ATP-dependent protease La 479 57.88 0 466982..467755 + 257 189423561 - Glov_0490 - protein of unknown function DUF140 480 51.37 0 467772..468320 + 182 189423562 - Glov_0491 - hypothetical protein 481 51.39 0 468310..468525 + 71 189423563 - Glov_0492 - hypothetical protein 482 56.48 0 468529..469284 + 251 189423564 - Glov_0493 - ABC transporter related 483 54.89 0 469290..469790 + 166 189423565 - Glov_0494 - hypothetical protein 484 57.25 0 469820..470902 + 360 189423566 - Glov_0495 - Mammalian cell entry related domain protein 485 60.23 +1 470919..472424 + 501 189423567 - Glov_0496 - peptidase M16 domain protein 486 57.56 0 472421..473836 + 471 189423568 - Glov_0497 - peptidase M16 domain protein 487 54.61 0 473944..474225 + 93 189423569 - Glov_0498 - anti-sigma-28 factor, FlgM 488 53.68 0 474287..475618 + 443 189423570 - Glov_0499 - hypothetical protein 489 55.33 0 475651..476823 + 390 189423571 - Glov_0500 - hypothetical protein 490 62.09 +1 476820..477650 - 276 189423572 - Glov_0501 - Uroporphyrinogen-III synthase 491 60.49 +1 477622..478560 - 312 189423573 - Glov_0502 - porphobilinogen deaminase 492 59.54 0 478585..479889 - 434 189423574 - Glov_0503 - glutamyl-tRNA reductase 493 58.21 0 479901..480716 - 271 189423575 - Glov_0504 - cytochrome c-type biogenesis protein CcsB 494 56.97 0 480930..481259 + 109 189423576 - Glov_0505 - thioredoxin 495 57.58 0 481261..481788 + 175 189423577 - Glov_0506 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 496 57.88 0 481819..482694 - 291 189423578 - Glov_0507 - UTP-glucose-1-phosphate uridylyltransferase 497 59.77 +1 482698..483552 - 284 189423579 - Glov_0508 - Methenyltetrahydrofolate cyclohydrolase 498 56.76 0 483781..484002 - 73 189423580 - Glov_0509 - regulatory protein, FmdB family 499 62.79 +1 484055..484777 - 240 189423581 - Glov_0510 - Smr protein/MutS2 500 61.00 +1 484788..486005 - 405 189423582 - Glov_0511 - protein of unknown function DUF401 501 52.56 0 486012..486401 - 129 189423583 - Glov_0512 - response regulator receiver protein 502 56.36 0 486417..486872 - 151 189423584 - Glov_0513 - hypothetical protein 503 50.00 0 486869..486970 - 33 189423585 - Glov_0514 - hypothetical protein 504 59.09 0 486971..487867 - 298 189423586 - Glov_0515 - TPR repeat-containing protein 505 59.46 0 487867..488712 - 281 189423587 - Glov_0516 - hypothetical protein 506 61.46 +1 488712..489863 - 383 189423588 - Glov_0517 - histone deacetylase superfamily 507 63.08 +1 489871..490761 - 296 189423589 - Glov_0518 - hypothetical protein 508 59.09 0 490885..491781 - 298 189423590 - Glov_0519 - chaperone DnaJ domain protein 509 56.22 0 491825..493078 - 417 189423591 - Glov_0520 - transposase IS204/IS1001/IS1096/IS1165 family protein 510 60.40 +1 493318..494721 + 467 189423592 - Glov_0521 - protoporphyrinogen oxidase 511 56.14 0 494724..494837 + 37 189423593 - Glov_0522 - hypothetical protein 512 58.44 0 494994..495686 - 230 189423594 - Glov_0523 - DNA repair protein RadC 513 58.36 0 495683..496501 - 272 189423595 - Glov_0524 - undecaprenol kinase 514 59.42 0 496509..497198 - 229 189423596 - Glov_0525 - hypothetical protein 515 55.62 0 497195..497692 - 165 189423597 - Glov_0526 - hypothetical protein 516 57.89 0 497819..498376 + 185 189423598 - Glov_0527 - amino acid-binding ACT domain protein 517 60.78 +1 498376..498885 + 169 189423599 - Glov_0528 - peptide deformylase 518 58.61 0 498894..499439 + 181 189423600 - Glov_0529 - AMMECR1 domain protein 519 53.25 0 499595..500101 + 168 189423601 - Glov_0530 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 520 53.85 0 500107..500457 + 116 189423602 - Glov_0531 - hypothetical protein 521 56.60 0 500643..501755 + 370 189423603 - Glov_0532 - Extracellular ligand-binding receptor 522 56.83 0 501765..503747 + 660 189423604 - Glov_0533 - integral membrane sensor signal transduction histidine kinase 523 54.34 0 504063..504638 - 191 189423605 - Glov_0534 - hypothetical protein 524 47.66 -1 504671..505012 - 113 189423606 - Glov_0535 - nitrogen regulatory protein P-II 525 55.91 0 505044..508148 - 1034 189423607 - Glov_0536 - heavy metal efflux pump, CzcA family 526 54.36 0 508185..509387 - 400 189423608 - Glov_0537 - efflux transporter, RND family, MFP subunit 527 56.74 0 509384..510682 - 432 189423609 - Glov_0538 - outer membrane efflux protein 528 54.05 0 510803..511135 - 110 189423610 - Glov_0539 - hypothetical protein 529 56.62 0 511363..513711 - 782 189423611 - Glov_0540 - Spermine synthase 530 60.25 +1 513720..514763 - 347 189423612 - Glov_0541 - protein of unknown function DUF6 transmembrane 531 54.17 0 515139..515450 - 103 189423613 - Glov_0542 - hypothetical protein 532 58.93 0 515503..515838 - 111 189423614 - Glov_0543 - hypothetical protein 533 62.58 +1 515896..516555 - 219 189423615 - Glov_0544 - ABC transporter related 534 62.02 +1 516646..517806 - 386 189423616 - Glov_0545 - protein of unknown function DUF214 535 57.53 0 517803..518240 - 145 189423617 - Glov_0546 - membrane protein-like protein 536 58.54 0 518243..519091 - 282 189423618 - Glov_0547 - cytochrome c-type biogenesis protein CcsB 537 58.95 0 519088..520473 - 461 189423619 - Glov_0548 - ResB family protein 538 54.45 0 520565..520957 - 130 189423620 - Glov_0549 - hypothetical protein 539 54.53 0 520954..521892 - 312 189423621 - Glov_0550 - Integral membrane protein TerC 540 56.80 0 521916..522503 - 195 189423622 - Glov_0551 - protein of unknown function UPF0016 541 56.24 0 522504..523088 - 194 189423623 - Glov_0552 - LemA family protein 542 53.59 0 523085..523321 - 78 189423624 - Glov_0553 - hypothetical protein 543 61.07 +1 523321..524178 - 285 189423625 - Glov_0554 - peptidase M48 Ste24p 544 54.98 0 524458..525090 - 210 189423626 - Glov_0555 - Carbonate dehydratase 545 61.31 +1 525104..525607 - 167 189423627 - Glov_0556 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 546 62.26 +1 525747..526994 + 415 189423628 - Glov_0557 - major facilitator superfamily MFS_1 547 59.96 +1 527083..529764 + 893 189423629 - Glov_0558 - PAS/PAC sensor hybrid histidine kinase 548 59.15 0 529772..531886 + 704 189423630 - Glov_0559 - multi-sensor hybrid histidine kinase 549 58.94 0 531883..534705 + 940 189423631 - Glov_0560 - PAS/PAC sensor hybrid histidine kinase 550 59.62 0 534702..535808 + 368 189423632 - Glov_0561 - Extracellular ligand-binding receptor 551 58.33 0 535805..538036 + 743 189423633 - Glov_0562 - integral membrane sensor hybrid histidine kinase 552 64.70 +2 538033..538794 + 253 189423634 - Glov_0563 - Methyltransferase type 11 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0