version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3507 60.54 +1 3814902..3816125 + 407 189426589 - Glov_3545 - FMN-dependent alpha-hydroxy acid dehydrogenase 3508 58.51 0 3816153..3817133 + 326 189426590 - Glov_3546 - ABC-type phosphate transport system periplasmic component-like protein 3509 63.08 +1 3817152..3817346 + 64 189426591 - Glov_3547 - twin-arginine translocation protein, TatA/E family subunit 3510 57.36 0 3817416..3818081 - 221 189426592 - Glov_3548 - outer membrane chaperone Skp (OmpH) 3511 58.54 0 3818160..3819341 - 393 189426593 - Glov_3549 - methyl-accepting chemotaxis sensory transducer 3512 60.60 +1 3819406..3821415 - 669 189426594 - Glov_3550 - Nitrate reductase 3513 57.68 0 3821556..3822545 + 329 189426595 - Glov_3551 - ADP-L-glycero-D-manno-heptose-6-epimerase 3514 55.66 0 3822572..3823198 + 208 189426596 - Glov_3552 - hypothetical protein 3515 61.60 +1 3823285..3824232 - 315 189426597 - Glov_3553 - cobalamin biosynthesis protein CobD 3516 60.22 +1 3824229..3826820 - 863 189426598 - Glov_3554 - cobyric acid synthase CobQ 3517 51.74 0 3826846..3827823 - 325 189426599 - Glov_3555 - response regulator receiver modulated GAF sensor protein 3518 57.59 0 3828402..3830306 + 634 189426600 - Glov_3556 - TonB-dependent receptor plug 3519 60.29 +1 3830310..3831140 + 276 189426601 - Glov_3557 - periplasmic binding protein 3520 65.93 +2 3831152..3832102 + 316 189426602 - Glov_3558 - transport system permease protein 3521 60.77 +1 3832099..3832827 + 242 189426603 - Glov_3559 - ABC transporter related 3522 47.24 -1 3832898..3833494 - 198 189426604 - Glov_3560 - hypothetical protein 3523 45.77 -1 3833649..3834251 - 200 189426605 - Glov_3561 - hypothetical protein 3524 54.71 0 3834414..3834848 - 144 189426606 - Glov_3562 - hypothetical protein 3525 57.78 0 3835026..3835565 + 179 189426607 - Glov_3563 - YaeQ family protein 3526 55.28 0 3835572..3835817 + 81 189426608 - Glov_3564 - protein of unknown function UPF0270 3527 61.15 +1 3835845..3837203 - 452 189426609 - Glov_3565 - MATE efflux family protein 3528 59.09 0 3837303..3839981 - 892 189426610 - Glov_3566 - pyruvate, phosphate dikinase 3529 60.91 +1 3840300..3842210 - 636 189426611 - Glov_3567 - selenocysteine-specific translation elongation factor 3530 55.25 0 3842207..3842530 - 107 189426612 - Glov_3568 - HNH endonuclease 3531 62.01 +1 3842533..3843240 - 235 189426613 - Glov_3569 - two component transcriptional regulator, winged helix family 3532 58.37 0 3843233..3844462 - 409 189426614 - Glov_3570 - protein of unknown function DUF214 3533 61.21 +1 3844459..3844989 - 176 189426615 - Glov_3571 - Appr-1-p processing domain protein 3534 52.91 0 3845017..3845394 - 125 189426616 - Glov_3572 - PilT protein domain protein 3535 54.32 0 3845384..3845626 - 80 189426617 - Glov_3573 - hypothetical protein 3536 60.55 +1 3845721..3846488 - 255 189426618 - Glov_3574 - RDD domain containing protein 3537 62.40 +1 3846481..3847488 - 335 189426619 - Glov_3575 - protein of unknown function DUF95 transmembrane 3538 61.80 +1 3847485..3848819 - 444 189426620 - Glov_3576 - protein of unknown function DUF58 3539 61.80 +1 3848816..3849781 - 321 189426621 - Glov_3577 - ATPase associated with various cellular activities AAA_3 3540 59.49 0 3849778..3850947 - 389 189426622 - Glov_3578 - hypothetical protein 3541 59.17 0 3850931..3852571 - 546 189426623 - Glov_3579 - hypothetical protein 3542 58.26 0 3852568..3852888 - 106 189426624 - Glov_3580 - rhomboid family protein 3543 54.71 0 3852885..3853436 - 183 189426625 - Glov_3581 - hypothetical protein 3544 55.00 0 3853433..3854032 - 199 189426626 - Glov_3582 - hypothetical protein 3545 56.98 0 3854032..3854919 - 295 189426627 - Glov_3583 - MJ0042 family finger-like protein 3546 57.45 0 3855051..3855896 - 281 189426628 - Glov_3584 - apurinic endonuclease Apn1 3547 62.54 +1 3855897..3857108 - 403 189426629 - Glov_3585 - molybdenum cofactor synthesis domain protein 3548 57.30 0 3857111..3858028 - 305 189426630 - Glov_3586 - quinolinate synthetase complex, A subunit 3549 58.48 0 3858352..3859035 - 227 189426631 - Glov_3587 - hypothetical protein 3550 56.43 0 3859037..3859417 - 126 189426632 - Glov_3588 - hypothetical protein 3551 53.33 0 3859588..3859842 - 84 189426633 - Glov_3589 - ribosomal protein L27 3552 53.40 0 3859877..3860185 - 102 189426634 - Glov_3590 - ribosomal protein L21 3553 54.19 0 3860464..3861120 - 218 189426635 - Glov_3591 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 3554 52.58 0 3861160..3861450 - 96 189426636 - Glov_3592 - DNA polymerase beta domain protein region 3555 52.74 0 3861443..3861844 - 133 189426637 - Glov_3593 - nucleotidyltransferase substrate binding protein, HI0074 family 3556 57.37 0 3861857..3863395 - 512 189426638 - Glov_3594 - phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 3557 55.64 0 3863411..3864625 - 404 189426639 - Glov_3595 - efflux transporter, RND family, MFP subunit 3558 61.48 +1 3865162..3866202 + 346 189426640 - Glov_3596 - translation initiation factor, aIF-2BI family 3559 58.68 0 3866204..3869407 + 1067 189426641 - Glov_3597 - (Glutamate--ammonia-ligase) adenylyltransferase 3560 58.47 0 3869404..3870660 + 418 189426642 - Glov_3598 - gamma-glutamyl phosphate reductase 3561 59.68 +1 3870819..3872393 - 524 189426643 - Glov_3599 - FAD dependent oxidoreductase 3562 55.31 0 3872399..3872803 - 134 189426644 - Glov_3600 - response regulator receiver protein 3563 57.00 0 3872810..3874009 - 399 189426645 - Glov_3601 - response regulator receiver sensor signal transduction histidine kinase 3564 51.54 0 3874037..3874492 - 151 189426646 - Glov_3602 - UspA domain protein 3565 52.02 0 3874492..3874887 - 131 189426647 - Glov_3603 - response regulator receiver protein 3566 58.66 0 3875012..3875848 - 278 189426648 - Glov_3604 - transcriptional regulator, putative 3567 56.89 0 3875860..3876606 - 248 189426649 - Glov_3605 - Tetratricopeptide TPR_2 repeat protein 3568 57.30 0 3876673..3877590 - 305 189426650 - Glov_3606 - PfkB domain protein 3569 54.62 0 3877603..3878457 - 284 189426651 - Glov_3607 - methylthioadenosine phosphorylase 3570 57.93 0 3878454..3879746 - 430 189426652 - Glov_3608 - diguanylate cyclase with PAS/PAC sensor 3571 58.33 0 3879748..3880275 - 175 189426653 - Glov_3609 - 4-vinyl reductase 4VR 3572 58.90 0 3880268..3881323 - 351 189426654 - Glov_3610 - radical SAM enzyme, Cfr family 3573 53.48 0 3881379..3881795 - 138 189426655 - Glov_3611 - Nucleoside-diphosphate kinase 3574 60.36 +1 3881979..3883373 + 464 189426656 - Glov_3612 - sun protein 3575 58.71 0 3883384..3884049 + 221 189426657 - Glov_3613 - Ribulose-phosphate 3-epimerase 3576 57.45 0 3884063..3884995 + 310 189426658 - Glov_3614 - response regulator receiver modulated diguanylate cyclase 3577 56.72 0 3885043..3886500 + 485 189426659 - Glov_3615 - transglutaminase domain protein 3578 59.15 0 3886588..3887865 - 425 189426660 - Glov_3616 - peptidase M16 domain protein 3579 55.40 0 3887862..3888296 - 144 189426661 - Glov_3617 - histidine triad (HIT) protein 3580 56.83 0 3888440..3889384 - 314 189426662 - Glov_3618 - integral membrane sensor signal transduction histidine kinase 3581 52.38 0 3889489..3889971 + 160 189426663 - Glov_3619 - hypothetical protein 3582 56.58 0 3890032..3890586 - 184 189426664 - Glov_3620 - hypothetical protein 3583 60.55 +1 3890631..3893147 - 838 189426665 - Glov_3621 - helicase c2 3584 50.67 0 3893346..3895208 + 620 189426666 - Glov_3623 - integral membrane sensor signal transduction histidine kinase 3585 53.43 0 3895205..3896617 + 470 189426667 - Glov_3624 - two component, sigma54 specific, transcriptional regulator, Fis family 3586 50.47 0 3896885..3898675 + 596 189426668 - Glov_3625 - flavocytochrome c 3587 51.97 0 3898779..3900023 + 414 189426669 - Glov_3626 - major facilitator superfamily MFS_1 3588 44.65 -1 3900062..3901369 + 435 189426670 - Glov_3627 - outer membrane porin 3589 56.67 0 3901475..3903424 - 649 189426671 - Glov_3628 - ABC transporter related 3590 57.68 0 3903428..3904117 - 229 189426672 - Glov_3629 - ABC transporter related 3591 55.84 0 3904120..3904581 - 153 189426673 - Glov_3630 - protein of unknown function DUF163 3592 55.40 0 3904594..3905010 - 138 189426674 - Glov_3631 - iojap-like protein 3593 56.54 0 3905007..3905648 - 213 189426675 - Glov_3632 - nicotinate (nicotinamide) nucleotide adenylyltransferase 3594 54.66 0 3905657..3906697 - 346 189426676 - Glov_3633 - NAD-dependent epimerase/dehydratase 3595 56.97 0 3906714..3907610 - 298 189426677 - Glov_3634 - formyl transferase domain protein 3596 56.87 0 3907607..3908545 - 312 189426678 - Glov_3635 - glycosyl transferase family 2 3597 57.42 0 3908542..3909687 - 381 189426679 - Glov_3636 - 3'-5' exonuclease 3598 54.98 0 3909687..3910730 - 347 189426680 - Glov_3637 - Radical SAM domain protein 3599 58.08 0 3910727..3911122 - 131 189426681 - Glov_3638 - tol-pal system-associated acyl-CoA thioesterase 3600 54.17 0 3911341..3911988 - 215 189426682 - Glov_3639 - methyltransferase GidB 3601 55.73 0 3911990..3913864 - 624 189426683 - Glov_3640 - glucose inhibited division protein A 3602 56.25 0 3913895..3915277 - 460 189426684 - Glov_3641 - tRNA modification GTPase TrmE 3603 47.21 -1 3915289..3916881 - 530 189426685 - Glov_3642 - 60 kDa inner membrane insertion protein 3604 51.64 0 3916900..3917112 - 70 189426686 - Glov_3643 - protein of unknown function DUF37 3605 52.42 0 3917091..3917462 - 123 189426687 - Glov_3644 - ribonuclease P protein component 3606 48.00 -1 3917480..3917629 - 49 189426688 - Glov_3645 - ribosomal protein L34 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0