version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3448 53.33 0 3743221..3743445 + 74 189426530 - Glov_3484 - nitrogen-fixing NifU domain protein 3449 48.30 -1 3743523..3743669 - 48 189426531 - Glov_3485 - hypothetical protein 3450 49.02 -1 3743701..3743853 - 50 189426532 - Glov_3486 - hypothetical protein 3451 53.01 0 3744382..3746292 - 636 189426533 - Glov_3487 - hypothetical protein 3452 50.95 0 3746374..3747111 - 245 189426534 - Glov_3488 - IstB domain protein ATP-binding protein 3453 52.34 0 3747098..3748612 - 504 189426535 - Glov_3489 - Integrase catalytic region 3454 43.06 -2 3749221..3749652 - 143 189426536 - Glov_3490 - protein export chaperone SecB 3455 44.54 -2 3749639..3749986 - 115 189426537 - Glov_3491 - transcriptional regulator, XRE family 3456 44.20 -2 3749992..3750405 - 137 189426538 - Glov_3492 - protein of unknown function DUF891 3457 51.22 0 3750542..3751771 - 409 189426539 - Glov_3493 - integrase family protein 3458 58.21 0 3751902..3755435 + 1177 189426540 - Glov_3494 - chromosome segregation protein SMC 3459 58.26 0 3755493..3755849 + 118 189426541 - Glov_3495 - Roadblock/LC7 family protein 3460 59.86 +1 3755849..3756877 + 342 189426542 - Glov_3496 - signal recognition particle-docking protein FtsY 3461 45.12 -1 3756900..3757145 + 81 189426543 - Glov_3497 - hypothetical protein 3462 58.42 0 3757149..3757427 + 92 189426544 - Glov_3498 - hypothetical protein 3463 56.90 0 3757809..3758402 + 197 189426545 - Glov_3499 - 5-formyltetrahydrofolate cyclo-ligase 3464 54.66 0 3758422..3759987 + 521 189426546 - Glov_3500 - RNA binding metal dependent phosphohydrolase 3465 58.78 0 3759988..3760773 + 261 189426547 - Glov_3501 - metallophosphoesterase 3466 58.62 0 3760792..3761997 + 401 189426548 - Glov_3502 - tyrosyl-tRNA synthetase 3467 54.59 0 3762068..3763003 - 311 189426549 - Glov_3503 - hypothetical protein 3468 60.99 +1 3763276..3764472 + 398 189426550 - Glov_3504 - SAM-dependent methyltransferase-like protein 3469 65.60 +2 3764497..3766191 + 564 189426551 - Glov_3505 - ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD 3470 61.46 +1 3766188..3767840 + 550 189426552 - Glov_3506 - ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC 3471 54.46 0 3767837..3768172 + 111 189426553 - Glov_3507 - membrane protein of unknown function 3472 57.41 0 3768169..3768492 + 107 189426554 - Glov_3508 - Class I peptide chain release factor 3473 56.98 0 3768611..3768868 - 85 189426555 - Glov_3509 - hypothetical protein 3474 55.25 0 3768941..3769159 - 72 189426556 - Glov_3510 - flagellar motor switch protein FliG 3475 62.30 +1 3769231..3771015 + 594 189426557 - Glov_3511 - ABC transporter related 3476 56.29 0 3771066..3773840 + 924 189426558 - Glov_3512 - type III restriction protein res subunit 3477 60.42 +1 3773821..3774012 + 63 189426559 - Glov_3513 - hypothetical protein 3478 52.41 0 3774013..3774468 + 151 189426560 - Glov_3514 - Excinuclease ABC C subunit domain protein 3479 47.06 -1 3774481..3776025 + 514 189426561 - Glov_3515 - restriction modification system DNA specificity domain 3480 51.14 0 3776022..3777077 + 351 189426562 - Glov_3516 - protein of unknown function DUF1016 3481 53.94 0 3777190..3778650 + 486 189426563 - Glov_3517 - N-6 DNA methylase 3482 52.63 0 3778690..3778917 + 75 189426564 - Glov_3518 - hypothetical protein 3483 59.04 0 3778904..3780214 + 436 189426565 - Glov_3519 - DEAD/DEAH box helicase domain protein 3484 56.76 0 3780406..3783453 + 1015 189426566 - Glov_3520 - multi-sensor signal transduction histidine kinase 3485 55.56 0 3783450..3784772 + 440 189426567 - Glov_3521 - two component, sigma54 specific, transcriptional regulator, Fis family 3486 58.54 0 3785145..3789008 + 1287 189426568 - Glov_3522 - multi-sensor hybrid histidine kinase 3487 59.25 0 3789002..3790093 + 363 189426569 - Glov_3523 - response regulator receiver modulated metal dependent phosphohydrolase 3488 55.17 0 3790113..3791225 + 370 189426570 - Glov_3524 - beta-lactamase domain protein 3489 58.83 0 3791279..3793255 + 658 189426571 - Glov_3525 - methyl-accepting chemotaxis sensory transducer 3490 62.51 +1 3793421..3795175 + 584 189426572 - Glov_3526 - integral membrane sensor signal transduction histidine kinase 3491 63.97 +1 3795129..3796535 + 468 189426573 - Glov_3527 - two component, sigma54 specific, transcriptional regulator, Fis family 3492 49.21 -1 3796562..3797323 + 253 189426574 - Glov_3528 - ABC-type amino acid transport/signal transduction system 3493 63.72 +1 3797320..3797760 + 146 189426575 - Glov_3529 - C_GCAxxG_C_C family protein 3494 60.10 +1 3798189..3799193 + 334 189426576 - Glov_3531 - hypothetical protein 3495 62.59 +1 3799282..3799821 + 179 189426577 - Glov_3532 - DSBA oxidoreductase 3496 57.44 0 3799998..3800528 + 176 189426578 - Glov_3533 - transcriptional regulator, XRE family 3497 56.24 0 3800525..3801109 + 194 189426579 - Glov_3534 - mobile mystery protein B 3498 47.45 -1 3801248..3802090 - 280 189426580 - Glov_3535 - hypothetical protein 3499 58.67 0 3802691..3803878 - 395 189426581 - Glov_3537 - iron-containing alcohol dehydrogenase 3500 58.84 0 3804035..3804979 + 314 189426582 - Glov_3538 - transcriptional regulator, AraC family 3501 64.88 +2 3805155..3807728 + 857 189426583 - Glov_3539 - cyclic nucleotide-binding protein 3502 60.27 +1 3808046..3809374 + 442 189426584 - Glov_3540 - anaerobic c4-dicarboxylate antiporter, Dcu family 3503 60.00 +1 3809507..3811276 + 589 189426585 - Glov_3541 - flavocytochrome c 3504 65.11 +2 3811342..3812559 + 405 189426586 - Glov_3542 - major facilitator superfamily MFS_1 3505 62.21 +1 3812663..3813874 + 403 189426587 - Glov_3543 - signal transduction histidine kinase, LytS 3506 60.19 +1 3813871..3814626 + 251 189426588 - Glov_3544 - two component transcriptional regulator, LytTR family 3507 60.54 +1 3814902..3816125 + 407 189426589 - Glov_3545 - FMN-dependent alpha-hydroxy acid dehydrogenase 3508 58.51 0 3816153..3817133 + 326 189426590 - Glov_3546 - ABC-type phosphate transport system periplasmic component-like protein 3509 63.08 +1 3817152..3817346 + 64 189426591 - Glov_3547 - twin-arginine translocation protein, TatA/E family subunit 3510 57.36 0 3817416..3818081 - 221 189426592 - Glov_3548 - outer membrane chaperone Skp (OmpH) 3511 58.54 0 3818160..3819341 - 393 189426593 - Glov_3549 - methyl-accepting chemotaxis sensory transducer 3512 60.60 +1 3819406..3821415 - 669 189426594 - Glov_3550 - Nitrate reductase 3513 57.68 0 3821556..3822545 + 329 189426595 - Glov_3551 - ADP-L-glycero-D-manno-heptose-6-epimerase 3514 55.66 0 3822572..3823198 + 208 189426596 - Glov_3552 - hypothetical protein 3515 61.60 +1 3823285..3824232 - 315 189426597 - Glov_3553 - cobalamin biosynthesis protein CobD 3516 60.22 +1 3824229..3826820 - 863 189426598 - Glov_3554 - cobyric acid synthase CobQ 3517 51.74 0 3826846..3827823 - 325 189426599 - Glov_3555 - response regulator receiver modulated GAF sensor protein 3518 57.59 0 3828402..3830306 + 634 189426600 - Glov_3556 - TonB-dependent receptor plug 3519 60.29 +1 3830310..3831140 + 276 189426601 - Glov_3557 - periplasmic binding protein 3520 65.93 +2 3831152..3832102 + 316 189426602 - Glov_3558 - transport system permease protein 3521 60.77 +1 3832099..3832827 + 242 189426603 - Glov_3559 - ABC transporter related 3522 47.24 -1 3832898..3833494 - 198 189426604 - Glov_3560 - hypothetical protein 3523 45.77 -1 3833649..3834251 - 200 189426605 - Glov_3561 - hypothetical protein 3524 54.71 0 3834414..3834848 - 144 189426606 - Glov_3562 - hypothetical protein 3525 57.78 0 3835026..3835565 + 179 189426607 - Glov_3563 - YaeQ family protein 3526 55.28 0 3835572..3835817 + 81 189426608 - Glov_3564 - protein of unknown function UPF0270 3527 61.15 +1 3835845..3837203 - 452 189426609 - Glov_3565 - MATE efflux family protein 3528 59.09 0 3837303..3839981 - 892 189426610 - Glov_3566 - pyruvate, phosphate dikinase 3529 60.91 +1 3840300..3842210 - 636 189426611 - Glov_3567 - selenocysteine-specific translation elongation factor 3530 55.25 0 3842207..3842530 - 107 189426612 - Glov_3568 - HNH endonuclease 3531 62.01 +1 3842533..3843240 - 235 189426613 - Glov_3569 - two component transcriptional regulator, winged helix family 3532 58.37 0 3843233..3844462 - 409 189426614 - Glov_3570 - protein of unknown function DUF214 3533 61.21 +1 3844459..3844989 - 176 189426615 - Glov_3571 - Appr-1-p processing domain protein 3534 52.91 0 3845017..3845394 - 125 189426616 - Glov_3572 - PilT protein domain protein 3535 54.32 0 3845384..3845626 - 80 189426617 - Glov_3573 - hypothetical protein 3536 60.55 +1 3845721..3846488 - 255 189426618 - Glov_3574 - RDD domain containing protein 3537 62.40 +1 3846481..3847488 - 335 189426619 - Glov_3575 - protein of unknown function DUF95 transmembrane 3538 61.80 +1 3847485..3848819 - 444 189426620 - Glov_3576 - protein of unknown function DUF58 3539 61.80 +1 3848816..3849781 - 321 189426621 - Glov_3577 - ATPase associated with various cellular activities AAA_3 3540 59.49 0 3849778..3850947 - 389 189426622 - Glov_3578 - hypothetical protein 3541 59.17 0 3850931..3852571 - 546 189426623 - Glov_3579 - hypothetical protein 3542 58.26 0 3852568..3852888 - 106 189426624 - Glov_3580 - rhomboid family protein 3543 54.71 0 3852885..3853436 - 183 189426625 - Glov_3581 - hypothetical protein 3544 55.00 0 3853433..3854032 - 199 189426626 - Glov_3582 - hypothetical protein 3545 56.98 0 3854032..3854919 - 295 189426627 - Glov_3583 - MJ0042 family finger-like protein 3546 57.45 0 3855051..3855896 - 281 189426628 - Glov_3584 - apurinic endonuclease Apn1 3547 62.54 +1 3855897..3857108 - 403 189426629 - Glov_3585 - molybdenum cofactor synthesis domain protein 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0