version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2928 57.66 0 3175965..3176297 + 110 189426010 - Glov_2960 - Cupin 2 conserved barrel domain protein 2929 55.19 0 3176321..3177949 - 542 189426011 - Glov_2961 - methyl-accepting chemotaxis sensory transducer 2930 54.13 0 3178054..3178659 - 201 189426012 - Glov_2962 - Carbonate dehydratase 2931 54.04 0 3178687..3179256 - 189 189426013 - Glov_2963 - isochorismatase hydrolase 2932 59.88 +1 3179357..3179680 - 107 189426014 - Glov_2964 - hypothetical protein 2933 57.52 0 3179790..3181013 + 407 189426015 - Glov_2965 - hypothetical protein 2934 58.29 0 3181028..3182101 + 357 189426016 - Glov_2966 - twitching motility protein 2935 58.33 0 3182128..3182811 + 227 189426017 - Glov_2967 - hypothetical protein 2936 53.40 0 3183344..3184285 + 313 189426018 - Glov_2968 - hypothetical protein 2937 54.14 0 3184503..3185021 + 172 189426019 - Glov_2969 - protein of unknown function DUF395 YeeE/YedE 2938 52.84 0 3185018..3185545 + 175 189426020 - Glov_2970 - protein of unknown function DUF395 YeeE/YedE 2939 45.47 -1 3185598..3186050 + 150 189426021 - Glov_2971 - hypothetical protein 2940 44.85 -1 3186212..3186376 - 54 189426022 - Glov_2972 - hypothetical protein 2941 49.03 -1 3186537..3186950 + 137 189426023 - Glov_2973 - hypothetical protein 2942 52.72 0 3187084..3188022 - 312 189426024 - Glov_2974 - transposase IS4 family protein 2943 51.46 0 3188122..3191376 + 1084 189426025 - Glov_2975 - diguanylate cyclase with PAS/PAC sensor 2944 61.31 +1 3193503..3194660 - 385 189426026 - Glov_2977 - aminotransferase class I and II 2945 58.12 0 3194660..3196321 - 553 189426027 - Glov_2978 - protein of unknown function DUF323 2946 47.58 -1 3196424..3197188 - 254 189426028 - Glov_2979 - D12 class N6 adenine-specific DNA methyltransferase 2947 49.62 -1 3197331..3197723 - 130 189426029 - Glov_2980 - hypothetical protein 2948 56.81 0 3197725..3200058 - 777 189426030 - Glov_2981 - hypothetical protein 2949 56.72 0 3200058..3200429 - 123 189426031 - Glov_2982 - hypothetical protein 2950 56.98 0 3200426..3200869 - 147 189426032 - Glov_2983 - hypothetical protein 2951 57.87 0 3200866..3201240 - 124 189426033 - Glov_2984 - hypothetical protein 2952 51.20 0 3201240..3202739 - 499 189426034 - Glov_2985 - hypothetical protein 2953 56.82 0 3202768..3203427 + 219 189426035 - Glov_2986 - dihydrouridine synthase, DuS 2954 60.93 +1 3203407..3204939 - 510 189426036 - Glov_2987 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 2955 60.56 +1 3204943..3205827 - 294 189426037 - Glov_2988 - protein of unknown function DUF362 2956 60.35 +1 3205882..3207384 - 500 189426038 - Glov_2989 - Radical SAM domain protein 2957 40.04 -2 3207541..3208047 - 168 189426039 - Glov_2990 - hypothetical protein 2958 31.93 -2 3208044..3209186 - 380 189426040 - Glov_2991 - abortive infection protein 2959 60.73 +1 3209628..3211496 - 622 189426041 - Glov_2992 - Radical SAM domain protein 2960 59.20 0 3211639..3212334 + 231 189426042 - Glov_2993 - type IV pilus assembly PilZ 2961 56.14 0 3212392..3214377 + 661 189426043 - Glov_2994 - hypothetical protein 2962 59.94 +1 3214396..3215391 + 331 189426044 - Glov_2995 - quinone oxidoreductase, YhdH/YhfP family 2963 50.31 0 3215471..3215629 - 52 189426045 - Glov_2996 - hypothetical protein 2964 59.39 0 3215788..3216282 + 164 189426046 - Glov_2997 - thioesterase superfamily protein 2965 56.11 0 3216331..3216813 + 160 189426047 - Glov_2998 - SEC-C motif domain protein 2966 60.87 +1 3216810..3217430 + 206 189426048 - Glov_2999 - protein of unknown function UPF0126 2967 61.73 +1 3217418..3218530 - 370 189426049 - Glov_3000 - Methyltransferase type 12 2968 53.54 0 3218601..3219080 + 159 189426050 - Glov_3001 - Domain of unknown function DUF1791 2969 57.31 0 3219030..3219617 - 195 189426051 - Glov_3002 - nitroreductase 2970 65.52 +2 3219610..3220653 - 347 189426052 - Glov_3003 - zinc-binding alcohol dehydrogenase family protein 2971 62.60 +1 3220643..3221749 - 368 189426053 - Glov_3004 - alanine dehydrogenase 2972 54.52 0 3222124..3222732 + 202 189426054 - Glov_3005 - OmpW family protein 2973 54.59 0 3222823..3223857 + 344 189426055 - Glov_3006 - beta-lactamase domain protein 2974 54.17 0 3223913..3224440 - 175 189426056 - Glov_3007 - DTW domain containing protein 2975 54.41 0 3224482..3225207 + 241 189426057 - Glov_3008 - hypothetical protein 2976 43.28 -2 3225360..3225560 + 66 189426058 - Glov_3009 - cold-shock DNA-binding domain protein 2977 45.33 -1 3225701..3225850 + 49 189426059 - Glov_3010 - hypothetical protein 2978 54.88 0 3225886..3227523 - 545 189426060 - Glov_3011 - ABC transporter related 2979 54.73 0 3227681..3228283 - 200 189426061 - Glov_3012 - transcriptional regulator, TetR family 2980 56.75 0 3228524..3230086 + 520 189426062 - Glov_3013 - Acetyl-CoA hydrolase 2981 52.31 0 3230138..3230353 + 71 189426063 - Glov_3014 - hypothetical protein 2982 59.72 +1 3230378..3231859 - 493 189426064 - Glov_3015 - glutamate synthase, NADH/NADPH, small subunit 2983 58.51 0 3231911..3236485 - 1524 189426065 - Glov_3016 - Glutamate synthase (ferredoxin) 2984 56.52 0 3236835..3237317 - 160 189426066 - Glov_3017 - GreA/GreB family elongation factor 2985 57.71 0 3237349..3238107 - 252 189426067 - Glov_3018 - hypothetical protein 2986 56.53 0 3238138..3239124 - 328 189426068 - Glov_3019 - aminoglycoside phosphotransferase 2987 60.16 +1 3239121..3240518 - 465 189426069 - Glov_3020 - DEAD/DEAH box helicase domain protein 2988 40.95 -2 3240606..3240710 - 34 189426070 - Glov_3021 - hypothetical protein 2989 55.09 0 3240809..3241024 - 71 189426071 - Glov_3022 - hypothetical protein 2990 55.38 0 3241066..3242040 - 324 189426072 - Glov_3023 - hypothetical protein 2991 53.47 0 3242230..3243078 + 282 189426073 - Glov_3024 - MscS Mechanosensitive ion channel 2992 53.45 0 3243093..3243614 - 173 189426074 - Glov_3025 - GCN5-related N-acetyltransferase 2993 57.72 0 3243759..3245021 - 420 189426075 - Glov_3026 - protein of unknown function DUF445 2994 59.83 +1 3245140..3245373 - 77 189426076 - Glov_3027 - protein of unknown function DUF1653 2995 60.49 +1 3245591..3246319 + 242 189426077 - Glov_3028 - PpiC-type peptidyl-prolyl cis-trans isomerase 2996 56.88 0 3246401..3246676 - 91 189426078 - Glov_3029 - hypothetical protein 2997 62.04 +1 3246698..3247216 - 172 189426079 - Glov_3030 - protein of unknown function UPF0066 2998 56.68 0 3247386..3248477 + 363 189426080 - Glov_3031 - BioD-like protein N-terminal domain of phosphotransacetylase-like protein 2999 52.94 0 3248534..3248941 - 135 189426081 - Glov_3032 - Secreted repeat of unknown function 3000 58.03 0 3249242..3250561 + 439 189426082 - Glov_3033 - Diaminopimelate decarboxylase 3001 61.16 +1 3250635..3251759 - 374 189426083 - Glov_3034 - peptidase T-like protein 3002 59.66 0 3252098..3253339 + 413 189426084 - Glov_3035 - hypothetical protein 3003 53.67 0 3253397..3253573 + 58 189426085 - Glov_3036 - hypothetical protein 3004 56.22 0 3253629..3254576 - 315 189426086 - Glov_3037 - protein of unknown function DUF1568 3005 46.96 -1 3254668..3255012 - 114 189426087 - Glov_3038 - protein of unknown function DUF86 3006 49.00 -1 3255005..3255304 - 99 189426088 - Glov_3039 - DNA polymerase beta domain protein region 3007 55.15 0 3255395..3256627 - 410 189426089 - Glov_3040 - aminotransferase class I and II 3008 34.69 -2 3256921..3257214 - 97 189426090 - Glov_3041 - hypothetical protein 3009 59.55 0 3257237..3258037 - 266 189426091 - Glov_3042 - Dihydrodipicolinate reductase 3010 56.47 0 3258194..3259066 - 290 189426092 - Glov_3043 - dihydrodipicolinate synthase 3011 56.97 0 3259129..3259623 - 164 189426093 - Glov_3044 - hypothetical protein 3012 56.66 0 3259785..3260813 - 342 189426094 - Glov_3045 - hypothetical protein 3013 57.08 0 3260988..3262583 + 531 189426095 - Glov_3046 - hypothetical protein 3014 57.58 0 3262608..3263498 + 296 189426096 - Glov_3047 - phosphoribosylaminoimidazole-succinocarboxamide synthase 3015 59.64 0 3263929..3265821 + 630 189426097 - Glov_3048 - hypothetical protein 3016 56.67 0 3265974..3266153 + 59 189426098 - Glov_3049 - hypothetical protein 3017 54.59 0 3266241..3266654 - 137 189426099 - Glov_3050 - hemerythrin-like metal-binding protein 3018 58.19 0 3266656..3269133 - 825 189426100 - Glov_3051 - peptidase S16 lon domain protein 3019 60.67 +1 3269197..3270429 - 410 189426101 - Glov_3052 - diguanylate cyclase 3020 60.96 +1 3270447..3271235 - 262 189426102 - Glov_3053 - metal-dependent phosphohydrolase HD sub domain 3021 54.85 0 3271235..3271945 - 236 189426103 - Glov_3054 - ubiquinone/menaquinone biosynthesis methyltransferase 3022 59.01 0 3272074..3273222 + 382 189426104 - Glov_3055 - protein of unknown function DUF147 3023 55.27 0 3273330..3274373 + 347 189426105 - Glov_3056 - NLP/P60 protein 3024 60.50 +1 3274438..3275994 + 518 189426106 - Glov_3057 - Radical SAM domain protein 3025 57.91 0 3276053..3276520 - 155 189426107 - Glov_3058 - lipoprotein, putative 3026 56.59 0 3276663..3278150 + 495 189426108 - Glov_3059 - protein of unknown function DUF344 3027 55.29 0 3278213..3278713 + 166 189426109 - Glov_3060 - hypothetical protein 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0