version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2125 56.78 0 2294354..2295658 - 434 189425207 - Glov_2148 - 3-phosphoshikimate 1-carboxyvinyltransferase 2126 56.52 0 2295690..2296556 - 288 189425208 - Glov_2149 - Prephenate dehydrogenase 2127 50.70 0 2296553..2297629 - 358 189425209 - Glov_2150 - chorismate mutase 2128 44.66 -1 2297794..2298411 - 205 189425210 - Glov_2151 - hypothetical protein 2129 46.30 -1 2298435..2299730 - 431 189425211 - Glov_2152 - hypothetical protein 2130 41.42 -2 2299749..2300156 - 135 189425212 - Glov_2153 - hypothetical protein 2131 41.12 -2 2300119..2300619 - 166 189425213 - Glov_2154 - hypothetical protein 2132 47.40 -1 2300674..2305734 - 1686 189425214 - Glov_2155 - Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 2133 49.33 -1 2305731..2306030 - 99 189425215 - Glov_2156 - hypothetical protein 2134 53.01 0 2306104..2306901 - 265 189425216 - Glov_2157 - thiol:disulfide interchange protein DsbC 2135 56.31 0 2307133..2308494 - 453 189425217 - Glov_2158 - two component, sigma54 specific, transcriptional regulator, Fis family 2136 57.45 0 2308491..2309987 - 498 189425218 - Glov_2159 - integral membrane sensor signal transduction histidine kinase 2137 57.01 0 2309991..2310767 - 258 189425219 - Glov_2160 - peptidase A24A domain protein 2138 48.31 -1 2310770..2311036 - 88 189425220 - Glov_2161 - Phosphotransferase system, phosphocarrier protein HPr 2139 53.44 0 2311050..2311442 - 130 189425221 - Glov_2162 - PTS system fructose subfamily IIA component 2140 56.41 0 2311449..2312306 - 285 189425222 - Glov_2163 - hypothetical protein 2141 56.04 0 2312310..2313269 - 319 189425223 - Glov_2164 - HPr kinase 2142 52.93 0 2313324..2313869 - 181 189425224 - Glov_2165 - sigma 54 modulation protein/ribosomal protein S30EA 2143 55.28 0 2313912..2315360 - 482 189425225 - Glov_2166 - RNA polymerase, sigma 54 subunit, RpoN 2144 57.66 0 2315379..2316122 - 247 189425226 - Glov_2167 - ABC transporter related 2145 55.74 0 2316100..2316648 - 182 189425227 - Glov_2168 - lipopolysaccharide transport periplasmic protein LptA 2146 53.78 0 2316635..2317216 - 193 189425228 - Glov_2169 - protein of unknown function DUF1239 2147 58.77 0 2317300..2317818 - 172 189425229 - Glov_2170 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2148 59.55 0 2317815..2318783 - 322 189425230 - Glov_2171 - KpsF/GutQ family protein 2149 58.85 0 2318780..2319598 - 272 189425231 - Glov_2172 - 2-dehydro-3-deoxyphosphooctonate aldolase 2150 61.75 +1 2319710..2320726 + 338 189425232 - Glov_2173 - Holliday junction DNA helicase RuvB 2151 63.19 +1 2320726..2321415 + 229 189425233 - Glov_2174 - Chromosomal replication initiator DnaA 2152 58.83 0 2321483..2322796 + 437 189425234 - Glov_2175 - hypothetical protein 2153 52.22 0 2323332..2323601 + 89 189425235 - Glov_2176 - hypothetical protein 2154 53.03 0 2323598..2323795 + 65 189425236 - Glov_2177 - hypothetical protein 2155 48.80 -1 2323761..2324303 + 180 189425237 - Glov_2178 - hypothetical protein 2156 52.34 0 2324383..2325897 + 504 189425238 - Glov_2179 - Integrase catalytic region 2157 50.95 0 2325884..2326621 + 245 189425239 - Glov_2180 - IstB domain protein ATP-binding protein 2158 52.43 0 2327393..2327701 - 102 189425240 - Glov_2181 - heat shock protein DnaJ domain protein 2159 55.48 0 2327708..2329585 - 625 189425241 - Glov_2182 - deoxyxylulose-5-phosphate synthase 2160 59.84 +1 2329592..2330485 - 297 189425242 - Glov_2183 - Polyprenyl synthetase 2161 48.72 -1 2330495..2330728 - 77 189425243 - Glov_2184 - exodeoxyribonuclease VII, small subunit 2162 57.38 0 2330872..2332293 + 473 189425244 - Glov_2185 - Radical SAM domain protein 2163 53.91 0 2332287..2332874 + 195 189425245 - Glov_2186 - hypothetical protein 2164 49.66 0 2332886..2333179 - 97 189425246 - Glov_2187 - hypothetical protein 2165 58.41 0 2333183..2335702 - 839 189425247 - Glov_2188 - hypothetical protein 2166 56.65 0 2335713..2336441 - 242 189425248 - Glov_2189 - lipoprotein, putative 2167 56.21 0 2336445..2337056 - 203 189425249 - Glov_2190 - outer membrane lipoprotein carrier protein LolA 2168 59.90 +1 2337053..2337466 - 137 189425250 - Glov_2191 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 2169 57.59 0 2337432..2338478 - 348 189425251 - Glov_2192 - Beta-ketoacyl synthase 2170 60.24 +1 2338478..2339707 - 409 189425252 - Glov_2193 - Beta-ketoacyl synthase 2171 57.16 0 2339704..2340450 - 248 189425253 - Glov_2194 - short-chain dehydrogenase/reductase SDR 2172 55.46 0 2340612..2341994 - 460 189425254 - Glov_2195 - Radical SAM domain protein 2173 57.41 0 2341991..2342422 - 143 189425255 - Glov_2196 - thioesterase superfamily protein 2174 53.37 0 2342419..2345418 - 999 189425256 - Glov_2197 - protein of unknown function DUF450 2175 53.79 0 2345415..2346470 - 351 189425257 - Glov_2198 - Appr-1-p processing domain protein 2176 50.62 0 2346489..2347130 - 213 189425258 - Glov_2199 - hypothetical protein 2177 49.49 -1 2347130..2348515 - 461 189425259 - Glov_2200 - type I restriction-modification system specificity subunit 2178 55.37 0 2348512..2350848 - 778 189425260 - Glov_2201 - N-6 DNA methylase 2179 60.62 +1 2350848..2351690 - 280 189425261 - Glov_2202 - acyl transferase region 2180 61.69 +1 2351687..2353114 - 475 189425262 - Glov_2203 - cobalamin B12-binding domain protein 2181 59.64 0 2353111..2354391 - 426 189425263 - Glov_2204 - Radical SAM domain protein 2182 56.41 0 2354388..2355674 - 428 189425264 - Glov_2205 - Radical SAM domain protein 2183 52.33 0 2355690..2355947 - 85 189425265 - Glov_2206 - phosphopantetheine-binding 2184 57.32 0 2355940..2356848 - 302 189425266 - Glov_2207 - lipid A biosynthesis acyltransferase 2185 53.94 0 2356848..2358230 - 460 189425267 - Glov_2208 - Radical SAM domain protein 2186 54.60 0 2358242..2358904 - 220 189425268 - Glov_2209 - glycosyl transferase family 2 2187 60.68 +1 2358886..2359737 - 283 189425269 - Glov_2210 - polysaccharide deacetylase 2188 57.01 0 2360022..2360891 - 289 189425270 - Glov_2211 - hypothetical protein 2189 54.63 0 2360951..2361706 - 251 189425271 - Glov_2212 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 2190 55.45 0 2361706..2363622 - 638 189425272 - Glov_2213 - succinate dehydrogenase or fumarate reductase, flavoprotein subunit 2191 52.62 0 2363633..2364301 - 222 189425273 - Glov_2214 - succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 2192 50.69 0 2364863..2365150 + 95 189425274 - Glov_2215 - histone family protein DNA-binding protein 2193 52.57 0 2365234..2366340 - 368 189425275 - Glov_2216 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2194 51.87 0 2366330..2367106 - 258 189425276 - Glov_2217 - HAD-superfamily hydrolase, subfamily IA, variant 3 2195 49.54 -1 2367128..2368855 - 575 189425277 - Glov_2218 - hypothetical protein 2196 44.89 -1 2369033..2369257 - 74 189425278 - Glov_2219 - hypothetical protein 2197 46.11 -1 2369261..2369581 - 106 189425279 - Glov_2220 - hypothetical protein 2198 44.90 -1 2369565..2369858 - 97 189425280 - Glov_2221 - protein of unknown function DUF497 2199 49.53 -1 2369912..2370442 - 176 189425281 - Glov_2222 - Ferritin Dps family protein 2200 52.67 0 2370579..2374229 + 1216 189425282 - Glov_2223 - protein of unknown function DUF748 2201 55.76 0 2374226..2375554 + 442 189425283 - Glov_2224 - MiaB-like tRNA modifying enzyme 2202 52.66 0 2375565..2376521 + 318 189425284 - Glov_2225 - response regulator receiver modulated CheW protein 2203 56.57 0 2376502..2376897 - 131 189425285 - Glov_2226 - thioesterase superfamily protein 2204 55.45 0 2377072..2378346 - 424 189425286 - Glov_2227 - hypothetical protein 2205 56.45 0 2378350..2379171 - 273 189425287 - Glov_2228 - NAD+ synthetase 2206 56.89 0 2379171..2380019 - 282 189425288 - Glov_2229 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2207 54.43 0 2380031..2380414 - 127 189425289 - Glov_2230 - protein of unknown function UPF0102 2208 58.80 0 2380405..2381967 - 520 189425290 - Glov_2231 - Aldehyde ferredoxin oxidoreductase 2209 52.42 0 2381976..2382305 - 109 189425291 - Glov_2232 - protein of unknown function UPF0044 2210 56.25 0 2382488..2384542 + 684 189425292 - Glov_2233 - squalene-hopene cyclase 2211 57.17 0 2384628..2385617 + 329 189425293 - Glov_2234 - hopanoid-associated sugar epimerase 2212 55.70 0 2385628..2387496 + 622 189425294 - Glov_2235 - deoxyxylulose-5-phosphate synthase 2213 53.79 0 2387510..2388511 + 333 189425295 - Glov_2236 - hopanoid biosynthesis associated radical SAM protein HpnH 2214 49.34 -1 2388539..2388919 + 126 189425296 - Glov_2237 - hypothetical protein 2215 55.46 0 2388921..2390294 + 457 189425297 - Glov_2238 - hydrolase, TatD family 2216 55.63 0 2390297..2390749 - 150 189425298 - Glov_2239 - hypothetical protein 2217 51.69 0 2390755..2391168 - 137 189425299 - Glov_2240 - protein of unknown function DUF350 2218 54.19 0 2391202..2392323 - 373 189425300 - Glov_2241 - glutathionylspermidine synthase 2219 56.92 0 2392328..2392645 - 105 189425301 - Glov_2242 - hypothetical protein 2220 56.90 0 2392750..2393763 + 337 189425302 - Glov_2243 - Radical SAM domain protein 2221 58.23 0 2393803..2394264 + 153 189425303 - Glov_2244 - thioesterase superfamily protein 2222 56.11 0 2394250..2395632 - 460 189425304 - Glov_2245 - two component, sigma54 specific, transcriptional regulator, Fis family 2223 59.18 0 2395755..2397317 + 520 189425305 - Glov_2246 - protein of unknown function DUF342 2224 58.48 0 2397314..2398681 - 455 189425306 - Glov_2247 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0