version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1574 53.50 0 1689315..1689785 + 156 189424656 - Glov_1597 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1575 54.36 0 1689795..1691135 + 446 189424657 - Glov_1598 - acetyl-CoA carboxylase, biotin carboxylase 1576 55.13 0 1691139..1691528 + 129 189424658 - Glov_1599 - glycine cleavage system H protein 1577 54.53 0 1691752..1693251 + 499 189424659 - Glov_1600 - outer membrane efflux protein 1578 56.40 0 1693251..1694078 + 275 189424660 - Glov_1601 - protein of unknown function DUF178 1579 53.52 0 1694075..1696492 + 805 189424661 - Glov_1602 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1580 55.06 0 1696438..1696911 - 157 189424662 - Glov_1603 - NUDIX hydrolase 1581 51.55 0 1697047..1697337 - 96 189424663 - Glov_1604 - hypothetical protein 1582 54.33 0 1697546..1698964 + 472 189424664 - Glov_1605 - Phosphoglucomutase 1583 54.33 0 1699076..1699942 + 288 189424665 - Glov_1606 - Fe-S cluster assembly protein NifU 1584 57.41 0 1699939..1701105 + 388 189424666 - Glov_1607 - cysteine desulfurase NifS 1585 57.06 0 1701246..1704512 + 1088 189424667 - Glov_1608 - peptidase C14 caspase catalytic subunit p20 1586 53.28 0 1704520..1705938 + 472 189424668 - Glov_1609 - S-layer-like protein array-related protein-like protein 1587 57.04 0 1705949..1707205 + 418 189424669 - Glov_1610 - catalytic domain of components of various dehydrogenase complexes 1588 56.68 0 1707226..1708677 + 483 189424670 - Glov_1611 - dihydrolipoamide dehydrogenase 1589 53.84 0 1708670..1710610 + 646 189424671 - Glov_1612 - aconitate hydratase 1590 51.63 0 1710616..1712058 + 480 189424672 - Glov_1613 - pyruvate kinase 1591 43.11 -2 1717700..1718374 - 224 189424673 - Glov_1614 - HAD-superfamily hydrolase, subfamily IA, variant 3 1592 46.32 -1 1718459..1718866 - 135 189424674 - Glov_1615 - hypothetical protein 1593 46.57 -1 1719111..1720115 + 334 189424675 - Glov_1616 - glyceraldehyde-3-phosphate dehydrogenase, type I 1594 48.24 -1 1720198..1721391 + 397 189424676 - Glov_1617 - Phosphoglycerate kinase 1595 51.59 0 1721400..1722155 + 251 189424677 - Glov_1618 - Triose-phosphate isomerase 1596 51.33 0 1722229..1722567 + 112 189424678 - Glov_1619 - preprotein translocase, SecG subunit 1597 51.75 0 1722819..1724621 + 600 189424679 - Glov_1620 - GTP-binding protein LepA 1598 49.16 -1 1724634..1725284 + 216 189424680 - Glov_1621 - signal peptidase I 1599 52.20 0 1725304..1727100 + 598 189424681 - Glov_1622 - aspartyl-tRNA synthetase 1600 51.79 0 1727106..1727804 + 232 189424682 - Glov_1623 - Peptidoglycan-binding LysM 1601 51.46 0 1728011..1730239 + 742 189424683 - Glov_1624 - isocitrate dehydrogenase, NADP-dependent 1602 53.00 0 1730350..1731315 + 321 189424684 - Glov_1625 - malate dehydrogenase, NAD-dependent 1603 46.57 -1 1731437..1731640 + 67 189424685 - Glov_1626 - 4Fe-4S ferredoxin iron-sulfur binding domain protein 1604 53.97 0 1731661..1732794 + 377 189424686 - Glov_1627 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein 1605 55.43 0 1732797..1733615 + 272 189424687 - Glov_1628 - thiamine pyrophosphate protein domain protein TPP-binding 1606 55.49 0 1733777..1734322 + 181 189424688 - Glov_1629 - pyruvate ferredoxin/flavodoxin oxidoreductase 1607 54.68 0 1734404..1735162 + 252 189424689 - Glov_1630 - short-chain dehydrogenase/reductase SDR 1608 54.98 0 1735168..1736733 - 521 189424690 - Glov_1631 - drug resistance transporter, EmrB/QacA subfamily 1609 55.28 0 1736740..1737846 - 368 189424691 - Glov_1632 - secretion protein HlyD family protein 1610 54.24 0 1737858..1739120 - 420 189424692 - Glov_1633 - outer membrane efflux protein 1611 52.72 0 1739122..1739544 - 140 189424693 - Glov_1634 - transcriptional regulator, MarR family 1612 52.99 0 1739706..1742411 + 901 189424694 - Glov_1635 - 2-oxoglutarate dehydrogenase, E1 subunit 1613 53.96 0 1742492..1743868 + 458 189424695 - Glov_1636 - hypothetical protein 1614 52.83 0 1743883..1745190 + 435 189424696 - Glov_1637 - peptidoglycan-binding LysM 1615 49.41 -1 1745198..1747132 + 644 189424697 - Glov_1638 - type II secretion system protein E 1616 46.86 -1 1747291..1747497 + 68 189424698 - Glov_1639 - transcriptional regulator, XRE family 1617 47.12 -1 1747510..1748568 + 352 189424699 - Glov_1640 - type IV pilus assembly protein PilM 1618 41.93 -2 1748565..1749134 + 189 189424700 - Glov_1641 - Fimbrial assembly family protein 1619 41.75 -2 1749168..1749773 + 201 189424701 - Glov_1642 - Pilus assembly protein PilO 1620 47.44 -1 1749748..1750314 + 188 189424702 - Glov_1643 - putative type IV pilus assembly protein PilP 1621 46.64 -1 1750327..1753002 + 891 189424703 - Glov_1644 - type IV pilus secretin PilQ 1622 44.66 -1 1753053..1753829 + 258 189424704 - Glov_1645 - hypothetical protein 1623 45.71 -1 1753958..1754167 - 69 189424705 - Glov_1646 - hypothetical protein 1624 49.31 -1 1754161..1754448 - 95 189424706 - Glov_1647 - Chorismate mutase 1625 51.09 0 1754460..1756064 - 534 189424707 - Glov_1648 - L-aspartate oxidase 1626 50.63 0 1756185..1757132 + 315 189424708 - Glov_1649 - riboflavin biosynthesis protein RibF 1627 54.51 0 1757132..1758151 + 339 189424709 - Glov_1650 - hypothetical protein 1628 52.59 0 1758148..1760022 + 624 189424710 - Glov_1651 - hypothetical protein 1629 54.08 0 1760012..1760893 + 293 189424711 - Glov_1652 - shikimate 5-dehydrogenase 1630 52.43 0 1760967..1762673 + 568 189424712 - Glov_1653 - type IV-A pilus assembly ATPase PilB 1631 51.83 0 1762686..1763777 + 363 189424713 - Glov_1654 - twitching motility protein 1632 50.21 0 1763806..1765020 + 404 189424714 - Glov_1655 - type II secretion system protein 1633 51.88 0 1765024..1766673 + 549 189424715 - Glov_1656 - multi-sensor signal transduction histidine kinase 1634 52.88 0 1766648..1768018 + 456 189424716 - Glov_1657 - two component, sigma54 specific, transcriptional regulator, Fis family 1635 52.78 0 1768087..1769166 + 359 189424717 - Glov_1658 - dTDP-glucose 4,6-dehydratase 1636 57.19 0 1769163..1769996 + 277 189424718 - Glov_1659 - dTDP-4-dehydrorhamnose reductase 1637 53.11 0 1770000..1770353 + 117 189424719 - Glov_1660 - Mannose-6-phosphate isomerase 1638 56.92 0 1770363..1771439 + 358 189424720 - Glov_1661 - Mannose-1-phosphate guanylyltransferase (GDP) 1639 57.65 0 1771515..1772690 + 391 189424721 - Glov_1662 - 8-amino-7-oxononanoate synthase 1640 56.25 0 1772690..1773505 + 271 189424722 - Glov_1663 - alpha/beta hydrolase fold 1641 56.74 0 1773492..1774307 + 271 189424723 - Glov_1664 - Methyltransferase type 11 1642 50.17 0 1774286..1774588 - 100 189424724 - Glov_1665 - transcriptional regulator, ArsR family 1643 50.00 0 1774785..1775264 + 159 189424725 - Glov_1666 - protein of unknown function DUF150 1644 54.66 0 1775337..1776494 + 385 189424726 - Glov_1667 - NusA antitermination factor 1645 56.37 0 1776498..1777109 + 203 189424727 - Glov_1668 - protein of unknown function DUF448 1646 56.46 0 1777106..1779955 + 949 189424728 - Glov_1669 - translation initiation factor IF-2 1647 51.34 0 1780099..1780470 + 123 189424729 - Glov_1670 - ribosome-binding factor A 1648 55.59 0 1780442..1781407 + 321 189424730 - Glov_1671 - phosphoesterase RecJ domain protein 1649 54.84 0 1781401..1782279 + 292 189424731 - Glov_1672 - tRNA pseudouridine synthase B 1650 50.19 0 1782387..1782653 + 88 189424732 - Glov_1673 - ribosomal protein S15 1651 55.63 0 1782835..1784946 + 703 189424733 - Glov_1674 - Polyribonucleotide nucleotidyltransferase 1652 51.99 0 1785055..1786962 + 635 189424734 - Glov_1675 - arginine decarboxylase 1653 55.97 0 1787058..1788254 + 398 189424735 - Glov_1676 - Saccharopine dehydrogenase 1654 53.85 0 1788392..1789546 + 384 189424736 - Glov_1677 - carboxynorspermidine decarboxylase 1655 43.63 -2 1789889..1790257 + 122 189424737 - Glov_1678 - hypothetical protein 1656 50.18 0 1790319..1790888 - 189 189424738 - Glov_1679 - phage prohead protease, HK97 family 1657 53.60 0 1791288..1792397 + 369 189424739 - Glov_1680 - transposase IS116/IS110/IS902 family protein 1658 52.54 0 1792755..1793837 + 360 189424740 - Glov_1681 - transposase IS4 family protein 1659 53.33 0 1794165..1794434 + 89 189424741 - Glov_1682 - transcriptional regulator, CopG family 1660 43.12 -2 1794434..1794709 + 91 189424742 - Glov_1683 - plasmid stabilization system 1661 57.90 0 1795044..1796423 + 459 189424743 - Glov_1684 - PAS modulated sigma54 specific transcriptional regulator, Fis family 1662 55.72 0 1796611..1797021 + 136 189424744 - Glov_1685 - hypothetical protein 1663 53.72 0 1797367..1797729 + 120 189424745 - Glov_1686 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein 1664 59.52 0 1797729..1798610 + 293 189424746 - Glov_1687 - Cobyrinic acid ac-diamide synthase 1665 57.34 0 1798607..1799485 + 292 189424747 - Glov_1688 - Cobyrinic acid ac-diamide synthase 1666 55.88 0 1799514..1800440 + 308 189424748 - Glov_1689 - Cobyrinic acid ac-diamide synthase 1667 50.00 0 1800437..1800670 + 77 189424749 - Glov_1690 - hypothetical protein 1668 56.43 0 1800661..1802115 + 484 189424750 - Glov_1691 - succinic semialdehyde dehydrogenase 1669 48.72 -1 1802125..1802358 + 77 189424751 - Glov_1692 - hypothetical protein 1670 53.10 0 1802355..1802693 + 112 189424752 - Glov_1693 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein 1671 56.31 0 1802717..1804135 + 472 189424753 - Glov_1694 - two component, sigma54 specific, transcriptional regulator, Fis family 1672 55.64 0 1804122..1805744 + 540 189424754 - Glov_1695 - integral membrane sensor signal transduction histidine kinase 1673 54.18 0 1805812..1806516 + 234 189424755 - Glov_1696 - Peroxiredoxin 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0