version 1.0
Geobacter lovleyi SZ, complete genome - 1..3917761 3606 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1295 53.46 0 1358186..1359124 + 312 189424377 - Glov_1313 - response regulator receiver modulated diguanylate cyclase 1296 51.26 0 1359158..1359793 + 211 189424378 - Glov_1314 - Fibronectin type III domain protein 1297 53.57 0 1359991..1360998 - 335 189424379 - Glov_1315 - hypothetical protein 1298 55.92 0 1361187..1362014 + 275 189424380 - Glov_1316 - nicotinate-nucleotide pyrophosphorylase 1299 58.56 0 1362020..1363006 + 328 189424381 - Glov_1317 - biotin/acetyl-CoA-carboxylase ligase 1300 52.68 0 1363031..1363795 + 254 189424382 - Glov_1318 - putative transcriptional acitvator, Baf family 1301 54.68 0 1363844..1365928 + 694 189424383 - Glov_1319 - translation elongation factor G 1302 56.89 0 1366023..1367024 + 333 189424384 - Glov_1320 - Sporulation domain protein 1303 53.85 0 1367036..1367956 + 306 189424385 - Glov_1321 - hypothetical protein 1304 52.03 0 1367981..1368793 + 270 189424386 - Glov_1322 - GTP-binding domain protein 1305 53.86 0 1368790..1369476 + 228 189424387 - Glov_1323 - MgtC/SapB transporter 1306 53.98 0 1369463..1370053 - 196 189424388 - Glov_1324 - hypothetical protein 1307 50.48 0 1370166..1370993 + 275 189424389 - Glov_1325 - transport-associated protein 1308 52.61 0 1370994..1371854 - 286 189424390 - Glov_1326 - PHP domain protein 1309 51.90 0 1371949..1372605 + 218 189424391 - Glov_1327 - DNA-(apurinic or apyrimidinic site) lyase 1310 50.06 0 1372733..1373599 + 288 189424392 - Glov_1328 - 3-hydroxyisobutyrate dehydrogenase 1311 54.91 0 1373679..1375277 + 532 189424393 - Glov_1329 - acetyl-CoA acetyltransferase-like protein 1312 50.12 0 1375372..1376229 + 285 189424394 - Glov_1330 - RNA polymerase, sigma 32 subunit, RpoH 1313 55.08 0 1376905..1378095 + 396 189424395 - Glov_1331 - translation elongation factor Tu 1314 38.00 -2 1378171..1378320 + 49 189424396 - Glov_1332 - ribosomal protein L33 1315 45.36 -1 1378484..1378666 + 60 189424397 - Glov_1333 - preprotein translocase, SecE subunit 1316 46.97 -1 1378680..1379207 + 175 189424398 - Glov_1334 - NusG antitermination factor 1317 47.42 -1 1379262..1379687 + 141 189424399 - Glov_1335 - ribosomal protein L11 1318 47.01 -1 1379734..1380435 + 233 189424400 - Glov_1336 - ribosomal protein L1 1319 50.86 0 1380587..1381111 + 174 189424401 - Glov_1337 - ribosomal protein L10 1320 49.87 0 1381168..1381548 + 126 189424402 - Glov_1338 - ribosomal protein L7/L12 1321 50.82 0 1381713..1386206 + 1497 189424403 - Glov_1339 - DNA-directed RNA polymerase, beta subunit 1322 51.52 0 1386284..1390441 + 1385 189424404 - Glov_1340 - DNA-directed RNA polymerase, beta' subunit 1323 51.34 0 1390817..1391188 + 123 189424405 - Glov_1341 - ribosomal protein S12 1324 49.26 -1 1391209..1391679 + 156 189424406 - Glov_1342 - ribosomal protein S7 1325 47.86 -1 1391706..1393784 + 692 189424407 - Glov_1343 - translation elongation factor G 1326 55.08 0 1393820..1395010 + 396 189424408 - Glov_1344 - translation elongation factor Tu 1327 49.51 -1 1395029..1395337 + 102 189424409 - Glov_1345 - ribosomal protein S10 1328 50.00 0 1395365..1396000 + 211 189424410 - Glov_1346 - ribosomal protein L3 1329 46.05 -1 1396020..1396640 + 206 189424411 - Glov_1347 - ribosomal protein L4/L1e 1330 46.32 -1 1396640..1396924 + 94 189424412 - Glov_1348 - Ribosomal protein L25/L23 1331 50.18 0 1396957..1397781 + 274 189424413 - Glov_1349 - ribosomal protein L2 1332 47.67 -1 1397804..1398082 + 92 189424414 - Glov_1350 - ribosomal protein S19 1333 50.88 0 1398099..1398440 + 113 189424415 - Glov_1351 - ribosomal protein L22 1334 47.71 -1 1398456..1399088 + 210 189424416 - Glov_1352 - ribosomal protein S3 1335 52.96 0 1399107..1399529 + 140 189424417 - Glov_1353 - ribosomal protein L16 1336 47.62 -1 1399519..1399707 + 62 189424418 - Glov_1354 - ribosomal protein L29 1337 48.84 -1 1399715..1399972 + 85 189424419 - Glov_1355 - ribosomal protein S17 1338 45.26 -1 1399997..1400365 + 122 189424420 - Glov_1356 - ribosomal protein L14 1339 45.57 -1 1400387..1400713 + 108 189424421 - Glov_1357 - ribosomal protein L24 1340 41.85 -2 1400732..1401271 + 179 189424422 - Glov_1358 - ribosomal protein L5 1341 53.76 0 1401284..1401469 + 61 189424423 - Glov_1359 - ribosomal protein S14 1342 44.36 -2 1401500..1401898 + 132 189424424 - Glov_1360 - ribosomal protein S8 1343 46.11 -1 1401931..1402470 + 179 189424425 - Glov_1361 - ribosomal protein L6 1344 52.03 0 1402500..1402868 + 122 189424426 - Glov_1362 - ribosomal protein L18 1345 50.10 0 1402896..1403384 + 162 189424427 - Glov_1363 - ribosomal protein S5 1346 47.46 -1 1403420..1403596 + 58 189424428 - Glov_1364 - ribosomal protein L30 1347 46.44 -1 1403612..1404061 + 149 189424429 - Glov_1365 - ribosomal protein L15 1348 44.82 -1 1404055..1405368 + 437 189424430 - Glov_1366 - preprotein translocase, SecY subunit 1349 48.99 -1 1405371..1406015 + 214 189424431 - Glov_1367 - Adenylate kinase 1350 47.66 -1 1406018..1406764 + 248 189424432 - Glov_1368 - methionine aminopeptidase, type I 1351 43.86 -2 1406792..1406905 + 37 189424433 - Glov_1369 - ribosomal protein L36 1352 49.05 -1 1406926..1407294 + 122 189424434 - Glov_1370 - ribosomal protein S13 1353 46.82 -1 1407325..1407717 + 130 189424435 - Glov_1371 - ribosomal protein S11 1354 46.89 -1 1407767..1408393 + 208 189424436 - Glov_1372 - ribosomal protein S4 1355 42.03 -2 1408458..1409480 + 340 189424437 - Glov_1373 - DNA-directed RNA polymerase, alpha subunit 1356 47.47 -1 1409529..1409903 + 124 189424438 - Glov_1374 - ribosomal protein L17 1357 45.25 -1 1409979..1410431 - 150 189424439 - Glov_1375 - hypothetical protein 1358 46.39 -1 1410561..1412774 + 737 189424440 - Glov_1376 - multi-sensor signal transduction histidine kinase 1359 51.76 0 1412795..1414183 + 462 189424441 - Glov_1377 - two component, sigma54 specific, transcriptional regulator, Fis family 1360 50.96 0 1414198..1414980 + 260 189424442 - Glov_1378 - Enoyl-CoA hydratase/isomerase 1361 54.95 0 1415066..1416388 - 440 189424443 - Glov_1379 - Citrate (Si)-synthase 1362 53.57 0 1416535..1417725 - 396 189424444 - Glov_1380 - creatinase 1363 53.60 0 1417789..1418385 + 198 189424445 - Glov_1381 - ribosomal L11 methyltransferase 1364 55.35 0 1418386..1419498 - 370 189424446 - Glov_1382 - hypothetical protein 1365 57.82 0 1419514..1420677 - 387 189424447 - Glov_1383 - band 7 protein 1366 53.07 0 1420987..1421883 - 298 189424448 - Glov_1384 - transcriptional regulator, MerR family 1367 53.46 0 1421994..1422470 + 158 189424449 - Glov_1385 - cyclase/dehydrase 1368 53.64 0 1422448..1422708 + 86 189424450 - Glov_1386 - hypothetical protein 1369 52.72 0 1422705..1422998 + 97 189424451 - Glov_1387 - hypothetical protein 1370 59.73 +1 1423003..1424574 + 523 189424452 - Glov_1388 - ABC-1 domain protein 1371 55.76 0 1424647..1426296 - 549 189424453 - Glov_1389 - AMP-dependent synthetase and ligase 1372 56.63 0 1426430..1427605 - 391 189424454 - Glov_1390 - Na+/H+ antiporter NhaA 1373 56.30 0 1427734..1428939 + 401 189424455 - Glov_1391 - efflux transporter, RND family, MFP subunit 1374 57.05 0 1428949..1432098 + 1049 189424456 - Glov_1392 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1375 58.73 0 1432091..1433476 + 461 189424457 - Glov_1393 - RND efflux system, outer membrane lipoprotein, NodT family 1376 52.40 0 1433477..1434934 - 485 189424458 - Glov_1394 - putative signal-transduction protein with CBS domains 1377 53.15 0 1435257..1436033 + 258 189424459 - Glov_1395 - transcriptional regulator, IclR family 1378 48.22 -1 1436138..1436446 + 102 189424460 - Glov_1396 - protein of unknown function DUF485 1379 57.56 0 1436458..1438455 + 665 189424461 - Glov_1397 - SSS sodium solute transporter superfamily 1380 48.22 -1 1438941..1439249 + 102 189424462 - Glov_1398 - protein of unknown function DUF485 1381 57.45 0 1439261..1441246 + 661 189424463 - Glov_1399 - SSS sodium solute transporter superfamily 1382 54.40 0 1441327..1442541 + 404 189424464 - Glov_1400 - protein of unknown function DUF294 nucleotidyltransferase putative 1383 44.55 -2 1442684..1443013 - 109 189424465 - Glov_1401 - hypothetical protein 1384 53.33 0 1443079..1444683 + 534 189424466 - Glov_1402 - Recombinase 1385 51.67 0 1444649..1445515 + 288 189424467 - Glov_1403 - parB-like partition protein 1386 48.43 -1 1445521..1446414 + 297 189424468 - Glov_1404 - RepB plasmid partition 1387 48.94 -1 1446527..1450171 - 1214 189424469 - Glov_1405 - Exodeoxyribonuclease V 1388 48.01 -1 1450217..1452961 - 914 189424470 - Glov_1406 - hypothetical protein 1389 54.07 0 1453040..1454119 - 359 189424471 - Glov_1407 - Domain of unknown function DUF1814 1390 46.94 -1 1454161..1454880 - 239 189424472 - Glov_1408 - hypothetical protein 1391 39.23 -2 1454895..1456115 - 406 189424473 - Glov_1409 - hypothetical protein 1392 46.06 -1 1456119..1457234 - 371 189424474 - Glov_1410 - hypothetical protein 1393 45.86 -1 1457243..1458160 - 305 189424475 - Glov_1411 - hypothetical protein 1394 47.15 -1 1458211..1458456 - 81 189424476 - Glov_1412 - hypothetical protein 54.66 MEAN 5.02 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0