IslandPath Analysis: Francisella philomiragia subsp. philomiragia ATCC 25017



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).



No RNA data available

A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.71   STD DEV: 3.22
Francisella philomiragia subsp. philomiragia ATCC 25017, complete genome - 1..2045775
1911 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
704	 37.41	+1	748035..748574	-	179	167626929	-	Fphi_0707	-	outer membrane protein of unknown function
705	 36.59	+1	748666..749310	-	214	167626930	-	Fphi_0708	-	S49 family serine peptidase
706	 30.19	0	749486..750409	-	307	167626931	-	Fphi_0709	-	integrase, catalytic region
707	 33.61	0	750723..751079	+	118	167626932	-	Fphi_0710	-	ferredoxin
708	 35.39	0	751240..752937	+	565	167626933	-	Fphi_0711	-	indolepyruvate decarboxylase
709	 33.57	0	752953..754203	-	416	167626934	-	Fphi_0712	-	Na+/H+ antiporter
710	 34.83	0	754733..755803	+	356	167626935	-	Fphi_0713	-	pyrimidine reductase/pyrimidine deaminase
711	 33.33	0	755796..756401	+	201	167626936	-	Fphi_0714	-	riboflavin synthase subunit alpha
712	 35.97	+1	756394..757605	+	403	167626937	-	Fphi_0715	-	GTP cyclohydrolase II
713	 35.59	0	757609..758052	+	147	167626938	-	Fphi_0716	-	riboflavin synthase
714	 31.21	0	758056..758574	+	172	167626939	-	Fphi_0717	-	peptide deformylase
715	 33.65	0	758671..759615	+	314	167626940	-	Fphi_0718	-	hypothetical protein
716	 37.22	+1	759644..760723	-	359	167626941	-	Fphi_0719	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
717	 37.48	+1	760837..762621	-	594	167626942	-	Fphi_0720	-	GTP-binding protein LepA
718	 37.36	+1	762890..763162	+	90	167626943	-	Fphi_0721	-	30S ribosomal protein S20
719	 28.53	-1	763250..763603	+	117	167626944	-	Fphi_0722	-	hypothetical protein
720	 28.93	-1	763605..764921	-	438	167626945	-	Fphi_0723	-	hypothetical protein
721	 32.23	0	764949..765311	-	120	167626946	-	Fphi_0724	-	outer membrane lipoprotein
722	 35.85	0	765316..765912	-	198	167626947	-	Fphi_0725	-	phosphoheptose isomerase
723	 31.25	0	766094..768394	+	766	167626948	-	Fphi_0726	-	hypothetical protein
724	 30.99	0	768458..769609	-	383	167626949	-	Fphi_0727	-	drug:H+ antiporter-1 (DHA1) family protein
725	 29.57	0	769707..770609	+	300	167626950	-	Fphi_0728	-	LysR family transcriptional regulator
726	 30.67	0	770684..771697	+	337	167626951	-	Fphi_0730	-	hypothetical protein
727	 31.39	0	771694..772362	-	222	167626952	-	Fphi_0729	-	hypothetical protein
728	 34.47	0	772362..772976	-	204	167626953	-	Fphi_0731	-	methyltransferase GidB
729	 34.16	0	773075..774280	+	401	167626954	-	Fphi_0733	-	hydroxy/aromatic amino acid permease (HAAAP) family protein
730	 35.69	0	774277..774954	-	225	167626955	-	Fphi_0732	-	hypothetical protein
731	 34.53	0	775336..776001	+	221	167626956	-	Fphi_0734	-	nitroreductase
732	 28.69	-1	776064..777011	+	315	167626957	-	Fphi_0735	-	LysR family transcriptional regulator
733	 29.82	0	777015..777527	-	170	167626958	-	Fphi_0736	-	cytochrome b561 family protein
734	 35.24	0	777611..778606	-	331	167626959	-	Fphi_0737	-	inorganic phosphate transporter (PiT) family protein
735	 31.96	0	778628..779284	-	218	167626960	-	Fphi_0738	-	hypothetical protein
736	 34.57	0	779608..781143	+	511	167626961	-	Fphi_0739	-	phospholipase C
737	 35.48	0	781179..782666	+	495	167626962	-	Fphi_0740	-	hypothetical protein
738	 28.18	-1	782682..783380	+	232	167626963	-	Fphi_0742	-	hypothetical protein
739	 28.53	-1	783377..783751	-	124	167626964	-	Fphi_0741	-	diacylglycerol kinase
740	 31.52	0	783757..785406	-	549	167626965	-	Fphi_0743	-	sulfatase
741	 34.18	0	785483..786307	-	274	167626966	-	Fphi_0744	-	allophanate hydrolase subunit 2
742	 33.91	0	786312..787010	-	232	167626967	-	Fphi_0745	-	hypothetical protein
743	 30.58	0	787010..787627	-	205	167626968	-	Fphi_0746	-	allophanate hydrolase subunit 1
744	 34.07	0	787663..788889	-	408	167626969	-	Fphi_0747	-	metabolite:H+ symporter (MHS) family protein
745	 34.77	0	789017..789853	-	278	167626970	-	Fphi_0748	-	universal stress protein
746	 31.03	0	789928..792666	-	912	167626971	-	Fphi_0749	-	DNA/RNA helicase
747	 34.12	0	792673..793434	-	253	167626972	-	Fphi_0750	-	hypothetical protein
748	 35.44	0	793499..794068	-	189	167626973	-	Fphi_0751	-	hypothetical protein
749	 29.22	-1	794146..794898	+	250	167626974	-	Fphi_0752	-	hypothetical protein
750	 35.99	+1	794916..795782	-	288	167626975	-	Fphi_0753	-	SAM-dependent methyltransferase
751	 34.51	0	795775..797133	-	452	167626976	-	Fphi_0754	-	UDP-N-acetylmuramate-alanine ligase
752	 31.79	0	797203..797979	-	258	167626977	-	Fphi_0755	-	shikimate 5-dehydrogenase
753	 39.65	+2	798101..798559	+	152	167626978	-	Fphi_0756	-	hypothetical protein
754	 37.78	+1	798651..798785	+	44	167626979	-	Fphi_0757	-	50S ribosomal protein L34
755	 29.94	0	798775..799128	+	117	167626980	-	Fphi_0758	-	ribonuclease P protein component
756	 31.58	0	799080..799364	+	94	167626981	-	Fphi_0759	-	hypothetical protein
757	 34.42	0	799361..801016	+	551	167626982	-	Fphi_0760	-	membrane protein of unknown function
758	 32.34	0	801018..801920	+	300	167626983	-	Fphi_0761	-	acyltransferase
759	 32.90	0	801981..802904	+	307	167626984	-	Fphi_0762	-	LPS fatty acid acyltransferase
760	 36.67	+1	802882..803331	+	149	167626985	-	Fphi_0763	-	type IV pili, pilus assembly protein
761	 34.04	0	803364..803933	+	189	167626986	-	Fphi_0764	-	elongation factor P
762	 31.66	0	803938..804474	+	178	167626987	-	Fphi_0765	-	oligoribonuclease
763	 25.67	-2	804602..804901	+	99	167626988	-	Fphi_0766	-	hypothetical protein
764	 37.02	+1	805116..807749	+	877	167626989	-	Fphi_0767	-	pyruvate phosphate dikinase
765	 34.46	0	808143..809030	+	295	167626990	-	Fphi_0768	-	branched-chain amino acid aminotransferase protein (class IV)
766	 33.59	0	809042..810622	+	526	167626991	-	Fphi_0769	-	2-isopropylmalate synthase
767	 36.81	+1	810624..812033	+	469	167626992	-	Fphi_0770	-	isopropylmalate isomerase large subunit
768	 32.81	0	812036..812605	+	189	167626993	-	Fphi_0771	-	3-isopropylmalate dehydratase
769	 35.00	0	812607..813686	+	359	167626994	-	Fphi_0772	-	3-isopropylmalate dehydrogenase
770	 30.36	0	813700..815043	-	447	167626995	-	Fphi_0773	-	alkaline phosphatase
771	 31.70	0	815285..817000	+	571	167626996	-	Fphi_0774	-	beta-fructofuranosidase
772	 32.55	0	816975..818255	+	426	167626997	-	Fphi_0776	-	major facilitator superfamily (MFS) transporter family protein
773	 29.73	0	818230..819645	-	471	167626998	-	Fphi_0775	-	hypothetical protein
774	 32.65	0	819738..820175	+	145	167626999	-	Fphi_0777	-	D-tyrosyl-tRNA deacylase
775	 34.52	0	820178..821017	+	279	167627000	-	Fphi_0779	-	prephenate dehydrogenase
776	 31.86	0	821008..821481	-	157	167627001	-	Fphi_0778	-	hypothetical protein
777	 36.71	+1	821485..822225	-	246	167627002	-	Fphi_0780	-	dihydroorotate oxidase
778	 35.07	0	822227..822859	-	210	167627003	-	Fphi_0781	-	orotidine-5'-phosphate decarboxylase
779	 36.21	+1	823154..826528	+	1124	167627004	-	Fphi_0782	-	hypothetical protein
780	 31.49	0	826566..827108	-	180	167627005	-	Fphi_0783	-	hypothetical protein
781	 35.10	0	827248..827871	+	207	167627006	-	Fphi_0784	-	hypothetical protein
782	 33.11	0	827881..828774	-	297	167627007	-	Fphi_0785	-	LysR family transcriptional regulator
783	 29.41	-1	828871..829278	+	135	167627008	-	Fphi_0786	-	hypothetical protein
784	 29.61	0	829354..830319	+	321	167627009	-	Fphi_0787	-	HlyD family membrane fusion protein
785	 31.46	0	830306..831370	+	354	167627010	-	Fphi_0788	-	hypothetical protein
786	 30.26	0	831415..832359	-	314	167627011	-	Fphi_0789	-	integrase, catalytic region
787	 34.27	0	832521..834017	+	498	167627012	-	Fphi_0790	-	GDSL-like lipolytic enzyme
788	 25.64	-2	834683..834916	+	77	167627013	-	Fphi_1914	-	hypothetical protein
789	 30.46	0	835039..836256	+	405	167627014	-	Fphi_0791	-	hypothetical protein
790	 34.37	0	836421..837095	+	224	167627015	-	Fphi_0792	-	hypothetical protein
791	 33.08	0	837332..838135	+	267	167627016	-	Fphi_0793	-	hypothetical protein
792	 26.70	-1	838352..839587	-	411	167627017	-	Fphi_0794	-	Signal transduction histidine kinase-like protein
793	 25.67	-2	839718..840317	-	199	167627018	-	Fphi_0795	-	hypothetical protein
794	 27.47	-1	840319..841341	-	340	167627019	-	Fphi_0796	-	hypothetical protein
795	 30.49	0	841347..841943	-	198	167627020	-	Fphi_0797	-	response regulator receiver protein
796	 29.80	0	842097..842492	+	131	167627021	-	Fphi_0798	-	integrase, catalytic region
797	 29.89	0	842577..843041	+	154	167627022	-	Fphi_0799	-	integrase, catalytic region
798	 33.61	0	843466..846036	-	856	167627023	-	Fphi_0800	-	hypothetical protein
799	 34.02	0	846577..847449	+	290	167627024	-	Fphi_0801	-	alpha/beta fold family hydrolase
800	 37.79	+1	847704..849050	-	448	167627025	-	Fphi_0802	-	dihydroorotase
801	 33.18	0	849304..849975	+	223	167627026	-	Fphi_0803	-	thiopurine S-methyltransferase
802	 32.52	0	849982..851085	-	367	167627027	-	Fphi_0804	-	acid phosphatase
803	 36.25	+1	851744..852910	+	388	167627028	-	Fphi_0805	-	carbamoyl phosphate synthase small subunit
32.71	MEAN

3.22	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.