version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 937 49.89 0 985210..986109 - 299 170683733 - EcSMS35_0975 - diacylglycerol kinase catalytic subunit 938 38.77 -2 986564..986839 + 91 170681865 - EcSMS35_0976 - hypothetical protein 939 54.33 0 987169..988530 - 453 170681214 - EcSMS35_0977 - U32 family peptidase 940 41.75 -1 988633..988929 - 98 170682935 - EcSMS35_0978 - RelE/ParE family plasmid stabilization system protein 941 50.79 0 988931..989182 - 83 170682278 - EcSMS35_0979 - CC2985 family addiction module antidote protein 942 48.05 0 989436..989768 - 110 170680967 - EcSMS35_0980 - hypothetical protein 943 53.80 0 989948..990670 - 240 170680336 baeR EcSMS35_0981 - DNA-binding response regulator BaeR 944 54.49 0 990667..992070 - 467 170680059 baeS EcSMS35_0982 - sensor histidine kinase BaeS 945 55.44 0 992067..993482 - 471 170682817 mdtD EcSMS35_0983 - multidrug resistance protein mdtD 946 56.82 +1 993483..996560 - 1025 170680004 mdtC EcSMS35_0984 - multidrug resistance protein MdtC 947 56.58 +1 996561..999683 - 1040 170680654 mdtB EcSMS35_0985 - multidrug resistance protein MdtB 948 54.97 0 999683..1000930 - 415 170683959 mdtA EcSMS35_0986 - multidrug resistance protein MdtA 949 51.97 0 1001819..1002478 + 219 170679715 - EcSMS35_0987 - von Willebrand factor type A domain-containing protein 950 49.63 0 1002556..1003236 + 226 170682031 - EcSMS35_0988 - hypothetical protein 951 39.46 -2 1003301..1003822 - 173 170682554 - EcSMS35_0989 - hypothetical protein 952 50.85 0 1003964..1005910 + 648 170681285 - EcSMS35_0990 - hypothetical protein 953 56.10 +1 1005923..1007275 - 450 170681799 - EcSMS35_0991 - hypothetical protein 954 55.12 0 1007409..1008257 + 282 170682302 alkA EcSMS35_0992 - DNA-3-methyladenine glycosylase 2 955 52.26 0 1008367..1011684 - 1105 170682376 - EcSMS35_0993 - sensory box-containing diguanylate cyclase 956 48.60 0 1012002..1012643 + 213 170680056 udk EcSMS35_0994 - uridine kinase 957 60.14 +1 1012735..1013316 + 193 170684104 dcd EcSMS35_0995 - deoxycytidine triphosphate deaminase 958 52.37 0 1013338..1015191 + 617 170681043 asmA EcSMS35_0996 - AsmA protein 959 43.64 -1 1015243..1015533 - 96 170680529 - EcSMS35_0997 - putative DNA-binding protein 960 40.99 -1 1015523..1015744 - 73 170682735 - EcSMS35_0998 - hypothetical protein 961 52.90 0 1016082..1017665 - 527 170682196 - EcSMS35_0999 - TerC family/CBS/transporter associated domain-containing protein 962 53.51 0 1018324..1019463 + 379 170683770 - EcSMS35_1000 - polysaccharide biosynthesis/export protein 963 54.05 0 1019469..1019912 + 147 170683201 wzb EcSMS35_1001 - low molecular weight protein-tyrosine-phosphatase wzb 964 52.47 0 1019915..1022077 + 720 170681107 wzc EcSMS35_1002 - tyrosine-protein kinase wzc 965 51.43 0 1022169..1023008 + 279 170681630 wcaA EcSMS35_1003 - colanic acid biosynthesis glycosyl transferase WcaA 966 54.60 0 1023011..1023499 + 162 170682182 - EcSMS35_1004 - putative colanic acid biosynthesis acetyltransferase wcaB 967 53.53 0 1023496..1024713 + 405 170682720 wcaC EcSMS35_1005 - colanic acid biosynthesis glycosyl transferase WcaC 968 42.45 -1 1024688..1025905 + 405 170683218 wcaD EcSMS35_1006 - colanic acid polymerase WcaD 969 46.18 0 1025916..1026662 + 248 170683751 wcaE EcSMS35_1007 - colanic acid biosynthesis glycosyl transferase WcaE 970 48.63 0 1026678..1027226 + 182 170681739 - EcSMS35_1008 - putative colanic acid biosynthesis acetyltransferase wcaF 971 54.55 0 1027253..1028374 + 373 170680092 gmd EcSMS35_1009 - GDP-mannose 4,6-dehydratase 972 55.49 0 1028377..1029342 + 321 170682214 fcl EcSMS35_1010 - GDP-L-fucose synthetase 973 55.42 0 1029345..1029824 + 159 170682709 nudD EcSMS35_1011 - GDP-mannose mannosyl hydrolase 974 55.64 0 1029821..1031044 + 407 170683742 wcaI EcSMS35_1012 - colanic acid biosynthesis glycosyl transferase WcaI 975 55.81 0 1031047..1032483 + 478 170682585 cpsB EcSMS35_1013 - mannose-1-phosphate guanylyltransferase 976 55.36 0 1032585..1033955 + 456 170683098 cpsG EcSMS35_1014 - phosphomannomutase 977 53.76 0 1034010..1035404 + 464 170682437 - EcSMS35_1015 - capsular polysaccharide biosynthesis protein 978 54.36 0 1035406..1036884 + 492 170681740 wzxC EcSMS35_1016 - polysaccharide biosynthesis protein WzxC 979 53.86 0 1036956..1038236 + 426 170683425 wcaK EcSMS35_1017 - colanic acid biosynthesis protein WcaK 980 55.12 0 1038233..1039453 + 406 170682752 wcaL EcSMS35_1018 - colanic acid biosynthesis glycosyl transferase WcaL 981 47.24 0 1039464..1040858 + 464 170679740 wcaM EcSMS35_1019 - colanic acid biosynthesis protein WcaM 982 45.08 0 1041016..1042011 + 331 170683772 gne EcSMS35_1020 - UDP-N-acetylglucosamine 4-epimerase 983 51.01 0 1042254..1043147 + 297 170680712 galF EcSMS35_1021 - regulatory protein GalF 984 31.75 -2 1043457..1044278 + 273 170680029 - EcSMS35_1022 - glycosyl transferase, group 2 985 31.30 -2 1044280..1046046 + 588 170679679 - EcSMS35_1023 - hypothetical protein 986 35.28 -2 1046050..1046922 + 290 170681350 - EcSMS35_1024 - glycosyl transferase, group 2 987 31.38 -2 1046922..1048100 + 392 170683073 - EcSMS35_1025 - hypothetical protein 988 33.14 -2 1048051..1049076 + 341 170682395 - EcSMS35_1026 - glycosyl transferase, group 1 989 29.35 -2 1049057..1050235 + 392 170682445 - EcSMS35_1027 - putative polysaccharide biosynthesis protein 990 30.39 -2 1050258..1050698 + 146 170683023 - EcSMS35_1028 - hypothetical protein 991 51.64 0 1050720..1050932 + 70 170684130 - EcSMS35_1029 - IS1 transposase orfA 992 54.76 0 1050943..1051446 + 167 170684151 - EcSMS35_1030 - IS1 transposase orfB 993 50.89 0 1051833..1053239 + 468 170683458 gnd EcSMS35_1031 - 6-phosphogluconate dehydrogenase, decarboxylating 994 43.96 -1 1053487..1054653 + 388 170680433 ugd EcSMS35_1032 - UDP-glucose 6-dehydrogenase 995 45.77 0 1054799..1055779 + 326 170680449 - EcSMS35_1033 - chain length determinant protein 996 54.41 0 1055875..1056486 - 203 170679746 hisIE EcSMS35_1034 - phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 997 52.38 0 1056480..1057256 - 258 170679723 hisF EcSMS35_1035 - imidazoleglycerol phosphate synthase, cyclase subunit 998 55.69 0 1057238..1057975 - 245 170680218 hisA EcSMS35_1036 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 999 57.36 +1 1057975..1058565 - 196 170680632 hisH EcSMS35_1037 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1000 53.09 0 1058565..1059632 - 355 170683419 hisB EcSMS35_1038 - histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase 1001 56.40 +1 1059632..1060702 - 356 170683323 hisC EcSMS35_1039 - histidinol-phosphate aminotransferase 1002 57.32 +1 1060699..1062003 - 434 170683888 hisD EcSMS35_1040 - histidinol dehydrogenase 1003 54.33 0 1062009..1062908 - 299 170682673 hisG EcSMS35_1041 - ATP phosphoribosyltransferase 1004 38.76 -2 1063273..1063401 + 42 170680854 - EcSMS35_1042 - hypothetical protein 1005 51.76 0 1063531..1064355 + 274 170681380 - EcSMS35_1043 - NAD dependent epimerase/dehydratase family protein 1006 51.29 0 1064401..1065330 + 309 170680006 - EcSMS35_1044 - LysR family transcriptional regulator 1007 52.91 0 1065597..1066955 + 452 170683794 yeeF EcSMS35_1045 - amino acid permease 1008 29.82 -2 1066986..1067099 + 37 170681177 - EcSMS35_1046 - hypothetical protein 1009 51.09 0 1067134..1068192 + 352 170680499 - EcSMS35_1047 - YeeE/YedE family membrane protein 1010 51.32 0 1068206..1068433 + 75 170682996 - EcSMS35_1048 - hypothetical protein 1011 50.00 0 1068476..1069903 - 475 170682338 sbcB EcSMS35_1049 - exodeoxyribonuclease I 1012 37.74 -2 1070027..1070185 - 52 170683165 - EcSMS35_1050 - hypothetical protein 1013 49.19 0 1070106..1071278 + 390 170683658 dacD EcSMS35_1051 - serine-type D-Ala-D-Ala carboxypeptidase 1014 47.47 0 1071397..1071870 + 157 170680306 gyrI EcSMS35_1052 - DNA gyrase inhibitory protein 1015 50.61 0 1072068..1073126 + 352 170681607 - EcSMS35_1054 - hypothetical protein 1016 41.88 -1 1073091..1073207 - 38 170679578 - EcSMS35_1053 - hypothetical protein 1017 47.27 0 1073298..1073627 + 109 170683170 - EcSMS35_1055 - hypothetical protein 1018 49.86 0 1073728..1074084 - 118 170681688 - EcSMS35_1056 - hypothetical protein 1019 50.00 0 1074399..1074512 - 37 170680134 - EcSMS35_1057 - hypothetical protein 1020 49.48 0 1074525..1074716 - 63 170682087 - EcSMS35_1058 - hypothetical protein 1021 53.03 0 1074826..1075089 - 87 170681113 - EcSMS35_1059 - hypothetical protein 1022 54.31 0 1075178..1075444 - 88 170683206 - EcSMS35_1060 - hypothetical protein 1023 54.50 0 1075620..1075841 - 73 170683714 - EcSMS35_1061 - hypothetical protein 1024 57.65 +1 1075904..1076380 - 158 170680081 - EcSMS35_1062 - RadC family DNA repair protein 1025 53.75 0 1076396..1076875 - 159 170680572 - EcSMS35_1063 - antirestriction protein 1026 57.06 +1 1076957..1077778 - 273 170681112 - EcSMS35_1064 - hypothetical protein 1027 43.70 -1 1077868..1078002 + 44 170680603 - EcSMS35_1066 - hypothetical protein 1028 41.36 -1 1077999..1078409 - 136 170682565 - EcSMS35_1065 - hypothetical protein 1029 45.91 0 1078425..1079108 - 227 170681111 - EcSMS35_1067 - hypothetical protein 1030 54.62 0 1079244..1080314 - 356 170684069 - EcSMS35_1068 - patatin family phospholipase 1031 53.97 0 1080311..1081216 - 301 170679812 - EcSMS35_1069 - hypothetical protein 1032 52.02 0 1081213..1083609 - 798 170682670 - EcSMS35_1070 - hypothetical protein 1033 58.42 +1 1083827..1084699 - 290 170683175 - EcSMS35_1071 - putative GTPase 1034 50.43 0 1084783..1085934 - 383 170681326 - EcSMS35_1072 - hypothetical protein 1035 45.59 0 1087862..1088383 + 173 170681841 - EcSMS35_1073 - IS150 transposase orfA 1036 42.72 -1 1088380..1089231 + 283 170679947 - EcSMS35_1074 - IS150 transposase orfB 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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