version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 50 50.76 0 54894..55484 + 196 170680741 folA EcSMS35_0050 - dihydrofolate reductase 51 43.78 -1 55801..56250 - 149 170683412 - EcSMS35_0051 - hypothetical protein 52 45.17 0 56286..56885 - 199 170684105 - EcSMS35_0052 - hypothetical protein 53 56.54 +1 56910..57758 - 282 170681134 - EcSMS35_0053 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 54 51.85 0 57765..58142 - 125 170681872 apaG EcSMS35_0054 - protein ApaG 55 53.65 0 58145..58966 - 273 170683255 ksgA EcSMS35_0055 - dimethyladenosine transferase 56 56.36 +1 58963..59952 - 329 170683725 pdxA EcSMS35_0056 - 4-hydroxythreonine-4-phosphate dehydrogenase 57 53.77 0 59952..61238 - 428 170682162 surA EcSMS35_0057 - chaperone/peptidyl-prolyl cis-trans isomerase SurA 58 50.98 0 61291..63648 - 785 170681284 imp EcSMS35_0058 - LPS-assembly protein 59 53.06 0 63903..64718 + 271 170681787 djlA EcSMS35_0059 - DnaJ family protein DjlA 60 53.48 0 64836..65495 - 219 170679993 - EcSMS35_0060 - RluA family pseudouridine synthase 61 55.07 0 65507..68413 - 968 170680507 rapA EcSMS35_0061 - RNA polymerase associated protein RapA 62 55.65 0 68577..70928 - 783 170683863 polB EcSMS35_0062 - DNA polymerase II 63 54.60 0 71003..71698 - 231 170683189 araD EcSMS35_0063 - L-ribulose-5-phosphate 4-epimerase 64 55.22 0 71898..73400 - 500 170682791 araA EcSMS35_0064 - L-arabinose isomerase 65 58.14 +1 73411..75111 - 566 170683895 araB EcSMS35_0065 - L-ribulokinase 66 52.84 0 75450..76295 + 281 170683703 araC EcSMS35_0066 - arabinose operon regulatory protein 67 33.69 -2 76809..77657 + 282 170679653 - EcSMS35_0067 - hypothetical protein 68 30.73 -2 77664..78086 + 140 170681643 - EcSMS35_0068 - hypothetical protein 69 54.38 0 78241..79005 + 254 170681148 - EcSMS35_0069 - hypothetical protein 70 56.37 +1 79075..79773 - 232 170680825 thiQ EcSMS35_0070 - thiamine ABC transporter, ATP-binding protein 71 57.67 +1 79757..81367 - 536 170682672 thiP EcSMS35_0071 - thiamine/thiamine pyrophosphate ABC transporter, permease protein 72 53.15 0 81343..82326 - 327 170682457 thiB EcSMS35_0072 - thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein 73 43.27 -1 82784..83266 + 160 170681784 - EcSMS35_0073 - hypothetical protein 74 55.58 0 83496..85154 - 552 170681588 sgrR EcSMS35_0074 - sugar transport-related sRNA regulator SgrR 75 46.97 0 85243..85374 + 43 170680796 - EcSMS35_0075 - hypothetical protein 76 52.15 0 85482..86087 - 201 170682967 leuD EcSMS35_0076 - 3-isopropylmalate dehydratase, small subunit 77 55.82 0 86098..87498 - 466 170682290 leuC EcSMS35_0077 - 3-isopropylmalate dehydratase, large subunit 78 54.95 0 87501..88592 - 363 170684236 leuB EcSMS35_0078 - 3-isopropylmalate dehydrogenase 79 52.74 0 88592..90163 - 523 170683572 leuA EcSMS35_0079 - 2-isopropylmalate synthase 80 41.67 -1 90380..90511 - 43 170680253 - EcSMS35_0080 - hypothetical protein 81 45.82 0 91001..91945 + 314 170679841 leuO EcSMS35_0081 - transcriptional regulator LeuO 82 25.20 -2 91981..92103 - 40 170681517 - EcSMS35_0082 - hypothetical protein 83 53.06 0 92173..93987 + 604 170683042 ilvI EcSMS35_0083 - acetolactate synthase, large subunit, isozyme III 84 49.62 0 93960..94481 + 173 170682993 ilvH EcSMS35_0084 - acetolactate synthase, small subunit, isozyme III 85 55.02 0 94661..95665 + 334 170683499 fruR EcSMS35_0085 - fructose repressor 86 52.29 0 96267..96725 + 152 170684017 mraZ EcSMS35_0086 - MraZ protein 87 55.10 0 96727..97668 + 313 170679711 mraW EcSMS35_0087 - S-adenosyl-methyltransferase MraW 88 50.00 0 97665..98030 + 121 170680807 ftsL EcSMS35_0088 - cell division protein FtsL 89 53.82 0 98046..99812 + 588 170681597 ftsI EcSMS35_0089 - peptidoglycan synthetase FtsI 90 56.65 +1 99799..101286 + 495 170682313 murE EcSMS35_0090 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 91 54.67 0 101283..102641 + 452 170682834 murF EcSMS35_0091 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 92 53.09 0 102635..103717 + 360 170684044 mraY EcSMS35_0092 - phospho-N-acetylmuramoyl-pentapeptide-transferase 93 54.90 0 103720..105036 + 438 170681706 murD EcSMS35_0093 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 94 52.69 0 105036..106280 + 414 170682663 ftsW EcSMS35_0094 - cell division protein FtsW 95 55.71 0 106277..107344 + 355 170683320 murG EcSMS35_0095 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 96 54.54 0 107398..108873 + 491 170683694 murC EcSMS35_0096 - UDP-N-acetylmuramate--alanine ligase 97 51.36 0 108866..109786 + 306 170683837 ddlB EcSMS35_0097 - D-alanine--D-alanine ligase B 98 53.19 0 109788..110618 + 276 170680072 ftsQ EcSMS35_0098 - cell division protein FtsQ 99 52.26 0 110615..111877 + 420 170680487 ftsA EcSMS35_0099 - cell division protein FtsA 100 53.91 0 111939..113090 + 383 170681165 ftsZ EcSMS35_0100 - cell division protein FtsZ 101 51.09 0 113191..114108 + 305 170681175 lpxC EcSMS35_0101 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 102 52.89 0 114264..114851 + 195 170682119 secM EcSMS35_0102 - secretion monitor protein 103 52.00 0 114913..117618 + 901 170680792 secA EcSMS35_0103 - preprotein translocase, SecA subunit 104 49.87 0 117678..118076 + 132 170682809 mutT EcSMS35_0104 - 7,8-dihydro-8-oxoguanine-triphosphatase 105 52.02 0 118165..118362 - 65 170683016 - EcSMS35_0105 - zinc-binding protein YacG 106 51.21 0 118372..119115 - 247 170683836 - EcSMS35_0106 - hypothetical protein 107 52.82 0 119115..119735 - 206 170684117 coaE EcSMS35_0107 - dephospho-CoA kinase 108 51.53 0 119960..121003 + 347 170683674 guaC EcSMS35_0108 - guanosine monophosphate reductase 109 51.95 0 121038..122240 - 400 170681709 pilC EcSMS35_0109 - type IV pilus assembly protein PilC 110 53.46 0 122230..123615 - 461 170681105 hofB EcSMS35_0110 - GspE family protein HofB 111 52.61 0 123625..124065 - 146 170682801 pilA EcSMS35_0111 - type 4 pilus subunit PilA 112 53.36 0 124268..125161 - 297 170681997 nadC EcSMS35_0112 - nicotinate-nucleotide diphosphorylase (carboxylating) 113 54.53 0 125249..125800 + 183 170683851 ampD EcSMS35_0113 - N-acetylmuramoyl-L-alanine amidase 114 51.70 0 125797..126651 + 284 170680046 ampE EcSMS35_0114 - protein AmpE 115 53.10 0 126694..128064 - 456 170680377 aroP EcSMS35_0115 - aromatic amino acid transport protein AroP 116 48.88 0 128593..130374 + 593 170680765 - EcSMS35_0116 - putative S-type colicin 117 36.84 -2 130377..130661 + 94 170681742 - EcSMS35_0117 - putative colicin immunity protein 118 36.67 -2 130829..131068 + 79 170682972 - EcSMS35_0118 - putative colicin 119 38.49 -2 131069..131359 + 96 170681564 - EcSMS35_0119 - putative colicin immunity protein 120 35.98 -2 131526..131714 + 62 170682281 - EcSMS35_0120 - putative colicin 121 32.32 -2 131762..132058 + 98 170683102 - EcSMS35_0121 - putative colicin immunity protein 122 55.69 0 132514..133278 + 254 170679674 - EcSMS35_0123 - GntR family transcriptional regulator 123 38.80 -2 133275..133457 - 60 170683479 - EcSMS35_0122 - hypothetical protein 124 53.23 0 133439..136102 + 887 170680617 aceE EcSMS35_0124 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type 125 55.04 0 136117..138009 + 630 170680247 aceF EcSMS35_0125 - dihydrolipoyllysine-residue acetyltransferase 126 52.28 0 138154..139641 + 495 170679767 lpdA EcSMS35_0126 - dihydrolipoamide dehydrogenase 127 53.24 0 139712..141469 - 585 170684092 - EcSMS35_0127 - hypothetical protein 128 55.32 0 141902..144421 + 839 170683451 acnB EcSMS35_0128 - aconitate hydratase 2 129 52.07 0 144596..144958 + 120 170683045 - EcSMS35_0129 - hypothetical protein 130 46.54 0 144996..145790 - 264 170682621 speD EcSMS35_0130 - S-adenosylmethionine decarboxylase 131 50.87 0 145806..146672 - 288 170683238 speE EcSMS35_0131 - spermidine synthase 132 49.71 0 146778..147125 - 115 170680607 - EcSMS35_0132 - hypothetical protein 133 54.16 0 147291..148841 + 516 170682517 cueO EcSMS35_0133 - copper oxidase CueO 134 55.37 0 148888..151278 - 796 170683523 gcd EcSMS35_0134 - quinoprotein glucose dehydrogenase 135 50.09 0 151484..152020 + 178 170680010 hpt EcSMS35_0135 - hypoxanthine phosphoribosyltransferase 136 50.83 0 152061..152723 - 220 170680677 can EcSMS35_0136 - carbonic anhydrase 137 48.54 0 152832..153758 + 308 170681249 - EcSMS35_0137 - ABC transporter, ATP-binding protein 138 51.23 0 153755..154525 + 256 170679696 - EcSMS35_0138 - ABC transporter, permease protein 139 50.11 0 154630..155070 + 146 170682787 - EcSMS35_0139 - PTS system IIA component domain-containing protein 140 48.37 0 155134..156363 + 409 170680801 - EcSMS35_0140 - polysaccharide deacetylase domain-containing protein 141 53.54 0 156367..156747 - 126 170683804 panD EcSMS35_0141 - aspartate 1-decarboxylase 142 48.86 0 157021..157941 + 306 170682409 - EcSMS35_0142 - ISNCY family transposase 143 44.91 -1 158010..158225 + 71 170681773 - EcSMS35_0143 - hypothetical protein 144 52.35 0 158307..159158 - 283 170679778 panC EcSMS35_0144 - pantoate--beta-alanine ligase 145 54.72 0 159170..159964 - 264 170682456 panB EcSMS35_0145 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 146 38.60 -2 160076..161347 - 423 170682836 - EcSMS35_0146 - putative fimbrial protein 147 41.04 -1 161401..161997 - 198 170680339 - EcSMS35_0147 - putative fimbrial protein 148 43.56 -1 162024..162629 - 201 170681181 - EcSMS35_0148 - hypothetical protein 149 41.98 -1 162644..163210 - 188 170683790 - EcSMS35_0149 - fimbrial protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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