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Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 897 38.94 -2 952607..953641 + 344 170679988 - EcSMS35_0935 - hypothetical protein 898 49.56 0 953723..954061 - 112 170679655 - EcSMS35_0936 - hypothetical protein 899 51.76 0 954280..955104 - 274 170681275 rcnA EcSMS35_0937 - nickel/cobalt efflux protein RcnA 900 48.72 0 955225..955497 + 90 170681417 rcnR EcSMS35_0938 - transcriptional repressor RcnR 901 48.24 0 955827..957047 + 406 170682065 - EcSMS35_0939 - phage integrase family site specific recombinase 902 33.80 -2 957044..957898 + 284 170682889 - EcSMS35_0940 - hypothetical protein 903 48.44 0 958002..958226 + 74 170683381 - EcSMS35_0941 - AlpA family transcriptional regulator 904 47.86 0 958237..959055 + 272 170679986 - EcSMS35_0942 - hypothetical protein 905 57.35 +1 959075..959278 + 67 170680725 - EcSMS35_0943 - hypothetical protein 906 40.50 -1 959271..959591 + 106 170681192 - EcSMS35_0944 - hypothetical protein 907 41.67 -1 959598..959897 + 99 170681857 - EcSMS35_0945 - hypothetical protein 908 50.99 0 959894..961711 + 605 170680147 - EcSMS35_0946 - D5 family nucleoside triphosphatase 909 50.00 0 961999..962244 + 81 170683188 - EcSMS35_0947 - hypothetical protein 910 59.86 +1 962241..962666 + 141 170683723 - EcSMS35_0948 - single-strand binding protein family 911 43.62 -1 962689..962931 + 80 170682171 - EcSMS35_0949 - hypothetical protein 912 37.87 -2 962967..963473 - 168 170682671 - EcSMS35_0950 - hypothetical protein 913 50.85 0 963760..964929 + 389 170681140 - EcSMS35_0951 - HK97 family phage major capsid protein 914 52.05 0 964984..965544 + 186 170681758 - EcSMS35_0952 - HK97 family phage prohead protease 915 53.50 0 965546..966760 + 404 170684127 - EcSMS35_0953 - HK97 family phage portal protein 916 50.50 0 966753..967055 + 100 170679967 - EcSMS35_0954 - DNA packaging, phage QLRG family protein 917 57.14 +1 967055..967495 + 146 170680539 - EcSMS35_0955 - HNH endonuclease family protein 918 52.60 0 967757..968140 + 127 170680329 - EcSMS35_0956 - P27 family phage terminase small subunit 919 52.17 0 968124..969785 + 553 170683362 - EcSMS35_0957 - putative phage terminase, large subunit 920 52.13 0 969791..970072 + 93 170683728 - EcSMS35_0958 - hypothetical protein 921 40.74 -1 970562..970723 - 53 170682010 - EcSMS35_0959 - hypothetical protein 922 55.13 0 970862..971650 + 262 170682995 thiM EcSMS35_0960 - hydroxyethylthiazole kinase 923 55.43 0 971647..972447 + 266 170681061 thiD EcSMS35_0961 - phosphomethylpyrimidine kinase 924 47.62 0 972512..973330 + 272 170681659 - EcSMS35_0962 - glycosy hydrolase family protein 925 51.41 0 973382..974128 + 248 170681641 - EcSMS35_0964 - GntR family transcriptional regulator 926 56.73 +1 974102..975067 - 321 170683756 - EcSMS35_0963 - PfkB family kinase 927 55.22 0 975064..976068 - 334 170681153 - EcSMS35_0965 - ADP-ribosylglycohydrolase family protein 928 50.47 0 976065..977342 - 425 170680614 yegT EcSMS35_0966 - nucleoside transporter 929 51.85 0 977599..978651 + 350 170680106 fbaB EcSMS35_0967 - fructose-bisphosphate aldolase, class 1 930 53.33 0 978880..979734 + 284 170681634 - EcSMS35_0968 - tagatose bisphosphate family class II aldolase 931 49.41 0 979763..981025 + 420 170681136 - EcSMS35_0969 - putative tagatose-6-phosphate kinase 932 42.60 -1 981035..981487 + 150 170680637 gatA EcSMS35_0970 - PTS system, galactitol-specific IIB component 933 44.56 -1 981518..981802 + 94 170680100 gatB EcSMS35_0971 - PTS system, galactitol-specific IIB component 934 51.84 0 981806..983161 + 451 170683704 gatC EcSMS35_0972 - PTS system, galactitol-specific IIC component 935 49.28 0 983209..984249 + 346 170680364 gatD EcSMS35_0973 - galactitol-1-phosphate 5-dehydrogenase 936 46.92 0 984349..985128 + 259 170682006 gatR EcSMS35_0974 - galactitol utilization operon repressor 937 49.89 0 985210..986109 - 299 170683733 - EcSMS35_0975 - diacylglycerol kinase catalytic subunit 938 38.77 -2 986564..986839 + 91 170681865 - EcSMS35_0976 - hypothetical protein 939 54.33 0 987169..988530 - 453 170681214 - EcSMS35_0977 - U32 family peptidase 940 41.75 -1 988633..988929 - 98 170682935 - EcSMS35_0978 - RelE/ParE family plasmid stabilization system protein 941 50.79 0 988931..989182 - 83 170682278 - EcSMS35_0979 - CC2985 family addiction module antidote protein 942 48.05 0 989436..989768 - 110 170680967 - EcSMS35_0980 - hypothetical protein 943 53.80 0 989948..990670 - 240 170680336 baeR EcSMS35_0981 - DNA-binding response regulator BaeR 944 54.49 0 990667..992070 - 467 170680059 baeS EcSMS35_0982 - sensor histidine kinase BaeS 945 55.44 0 992067..993482 - 471 170682817 mdtD EcSMS35_0983 - multidrug resistance protein mdtD 946 56.82 +1 993483..996560 - 1025 170680004 mdtC EcSMS35_0984 - multidrug resistance protein MdtC 947 56.58 +1 996561..999683 - 1040 170680654 mdtB EcSMS35_0985 - multidrug resistance protein MdtB 948 54.97 0 999683..1000930 - 415 170683959 mdtA EcSMS35_0986 - multidrug resistance protein MdtA 949 51.97 0 1001819..1002478 + 219 170679715 - EcSMS35_0987 - von Willebrand factor type A domain-containing protein 950 49.63 0 1002556..1003236 + 226 170682031 - EcSMS35_0988 - hypothetical protein 951 39.46 -2 1003301..1003822 - 173 170682554 - EcSMS35_0989 - hypothetical protein 952 50.85 0 1003964..1005910 + 648 170681285 - EcSMS35_0990 - hypothetical protein 953 56.10 +1 1005923..1007275 - 450 170681799 - EcSMS35_0991 - hypothetical protein 954 55.12 0 1007409..1008257 + 282 170682302 alkA EcSMS35_0992 - DNA-3-methyladenine glycosylase 2 955 52.26 0 1008367..1011684 - 1105 170682376 - EcSMS35_0993 - sensory box-containing diguanylate cyclase 956 48.60 0 1012002..1012643 + 213 170680056 udk EcSMS35_0994 - uridine kinase 957 60.14 +1 1012735..1013316 + 193 170684104 dcd EcSMS35_0995 - deoxycytidine triphosphate deaminase 958 52.37 0 1013338..1015191 + 617 170681043 asmA EcSMS35_0996 - AsmA protein 959 43.64 -1 1015243..1015533 - 96 170680529 - EcSMS35_0997 - putative DNA-binding protein 960 40.99 -1 1015523..1015744 - 73 170682735 - EcSMS35_0998 - hypothetical protein 961 52.90 0 1016082..1017665 - 527 170682196 - EcSMS35_0999 - TerC family/CBS/transporter associated domain-containing protein 962 53.51 0 1018324..1019463 + 379 170683770 - EcSMS35_1000 - polysaccharide biosynthesis/export protein 963 54.05 0 1019469..1019912 + 147 170683201 wzb EcSMS35_1001 - low molecular weight protein-tyrosine-phosphatase wzb 964 52.47 0 1019915..1022077 + 720 170681107 wzc EcSMS35_1002 - tyrosine-protein kinase wzc 965 51.43 0 1022169..1023008 + 279 170681630 wcaA EcSMS35_1003 - colanic acid biosynthesis glycosyl transferase WcaA 966 54.60 0 1023011..1023499 + 162 170682182 - EcSMS35_1004 - putative colanic acid biosynthesis acetyltransferase wcaB 967 53.53 0 1023496..1024713 + 405 170682720 wcaC EcSMS35_1005 - colanic acid biosynthesis glycosyl transferase WcaC 968 42.45 -1 1024688..1025905 + 405 170683218 wcaD EcSMS35_1006 - colanic acid polymerase WcaD 969 46.18 0 1025916..1026662 + 248 170683751 wcaE EcSMS35_1007 - colanic acid biosynthesis glycosyl transferase WcaE 970 48.63 0 1026678..1027226 + 182 170681739 - EcSMS35_1008 - putative colanic acid biosynthesis acetyltransferase wcaF 971 54.55 0 1027253..1028374 + 373 170680092 gmd EcSMS35_1009 - GDP-mannose 4,6-dehydratase 972 55.49 0 1028377..1029342 + 321 170682214 fcl EcSMS35_1010 - GDP-L-fucose synthetase 973 55.42 0 1029345..1029824 + 159 170682709 nudD EcSMS35_1011 - GDP-mannose mannosyl hydrolase 974 55.64 0 1029821..1031044 + 407 170683742 wcaI EcSMS35_1012 - colanic acid biosynthesis glycosyl transferase WcaI 975 55.81 0 1031047..1032483 + 478 170682585 cpsB EcSMS35_1013 - mannose-1-phosphate guanylyltransferase 976 55.36 0 1032585..1033955 + 456 170683098 cpsG EcSMS35_1014 - phosphomannomutase 977 53.76 0 1034010..1035404 + 464 170682437 - EcSMS35_1015 - capsular polysaccharide biosynthesis protein 978 54.36 0 1035406..1036884 + 492 170681740 wzxC EcSMS35_1016 - polysaccharide biosynthesis protein WzxC 979 53.86 0 1036956..1038236 + 426 170683425 wcaK EcSMS35_1017 - colanic acid biosynthesis protein WcaK 980 55.12 0 1038233..1039453 + 406 170682752 wcaL EcSMS35_1018 - colanic acid biosynthesis glycosyl transferase WcaL 981 47.24 0 1039464..1040858 + 464 170679740 wcaM EcSMS35_1019 - colanic acid biosynthesis protein WcaM 982 45.08 0 1041016..1042011 + 331 170683772 gne EcSMS35_1020 - UDP-N-acetylglucosamine 4-epimerase 983 51.01 0 1042254..1043147 + 297 170680712 galF EcSMS35_1021 - regulatory protein GalF 984 31.75 -2 1043457..1044278 + 273 170680029 - EcSMS35_1022 - glycosyl transferase, group 2 985 31.30 -2 1044280..1046046 + 588 170679679 - EcSMS35_1023 - hypothetical protein 986 35.28 -2 1046050..1046922 + 290 170681350 - EcSMS35_1024 - glycosyl transferase, group 2 987 31.38 -2 1046922..1048100 + 392 170683073 - EcSMS35_1025 - hypothetical protein 988 33.14 -2 1048051..1049076 + 341 170682395 - EcSMS35_1026 - glycosyl transferase, group 1 989 29.35 -2 1049057..1050235 + 392 170682445 - EcSMS35_1027 - putative polysaccharide biosynthesis protein 990 30.39 -2 1050258..1050698 + 146 170683023 - EcSMS35_1028 - hypothetical protein 991 51.64 0 1050720..1050932 + 70 170684130 - EcSMS35_1029 - IS1 transposase orfA 992 54.76 0 1050943..1051446 + 167 170684151 - EcSMS35_1030 - IS1 transposase orfB 993 50.89 0 1051833..1053239 + 468 170683458 gnd EcSMS35_1031 - 6-phosphogluconate dehydrogenase, decarboxylating 994 43.96 -1 1053487..1054653 + 388 170680433 ugd EcSMS35_1032 - UDP-glucose 6-dehydrogenase 995 45.77 0 1054799..1055779 + 326 170680449 - EcSMS35_1033 - chain length determinant protein 996 54.41 0 1055875..1056486 - 203 170679746 hisIE EcSMS35_1034 - phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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