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Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 862 56.29 +1 903192..904193 - 333 170681482 ltaE EcSMS35_0899 - low-specificity L-threonine aldolase 863 53.64 0 904230..905948 - 572 170679672 poxB EcSMS35_0900 - pyruvate dehydrogenase (cytochrome) 864 55.73 0 906081..907049 - 322 170683685 hcr EcSMS35_0901 - NADH oxidoreductase hcr 865 54.45 0 907061..908713 - 550 170683671 hcp EcSMS35_0902 - hydroxylamine reductase 866 48.44 0 908857..909756 - 299 170684217 - EcSMS35_0903 - hypothetical protein 867 49.71 0 910096..911121 + 341 170681747 - EcSMS35_0904 - IS110 family transposase 868 54.70 0 911930..913366 + 478 170681074 - EcSMS35_0905 - NodT family efflux transporter outer membrane lipoprotein 869 54.99 0 913419..914180 + 253 170680771 - EcSMS35_0906 - putative 3-oxoacyl-[acyl-carrier-protein] reductase 870 55.83 0 914190..914309 + 39 170683385 - EcSMS35_0908 - hypothetical protein 871 54.58 0 914300..914878 - 192 170682767 - EcSMS35_0907 - hypothetical protein 872 53.91 0 915048..915635 + 195 170680224 - EcSMS35_0909 - hypothetical protein 873 51.27 0 915800..916741 + 313 170679983 pbpG EcSMS35_0910 - penicillin-binding protein 7 874 51.98 0 916780..918495 - 571 170681665 dld EcSMS35_0911 - D-lactate dehydrogenase 875 54.44 0 918691..920988 + 765 170681058 bglX EcSMS35_0912 - beta-glucosidase, periplasmic 876 53.81 0 921240..922157 + 305 170683010 - EcSMS35_0913 - quaternary amine ABC transporter periplasmic substrate-binding protein 877 57.25 +1 922164..923321 + 385 170682890 - EcSMS35_0914 - quaternary amine ABC transporter permease 878 55.56 0 923314..924240 + 308 170684202 - EcSMS35_0915 - quaternary amine ABC transporter ATP-binding protein 879 57.10 +1 924245..924976 + 243 170680189 - EcSMS35_0916 - quaternary amine ABC transporter permease 880 53.14 0 925124..925855 - 243 170680991 - EcSMS35_0917 - transcriptional regulator MlrA 881 51.19 0 926077..927762 + 561 170681525 - EcSMS35_0918 - sensor histidine kinase 882 49.44 0 927759..928478 + 239 170681501 - EcSMS35_0919 - DNA-binding response regulator 883 48.62 0 928525..928995 + 156 170682350 - EcSMS35_0920 - hypothetical protein 884 42.21 -1 929036..929497 - 153 170682891 - EcSMS35_0921 - putative lipoprotein 885 54.67 0 929622..931622 - 666 170683564 - EcSMS35_0922 - hypothetical protein 886 54.18 0 931619..932755 - 378 170683571 - EcSMS35_0923 - von Willebrand factor type A domain-containing protein 887 55.44 0 932748..935027 - 759 170684260 - EcSMS35_0924 - hypothetical protein 888 54.27 0 935038..936126 - 362 170683960 - EcSMS35_0925 - AAA family ATPase 889 38.63 -2 936702..937022 - 106 170679615 - EcSMS35_0926 - hypothetical protein 890 50.15 0 937083..940745 - 1220 170680560 - EcSMS35_0927 - molybdate metabolism regulator MolR-like protein 891 50.38 0 940755..944543 - 1262 170680946 molR EcSMS35_0928 - molybdate metabolism regulator MolR 892 52.65 0 944684..946717 - 677 170681859 metG EcSMS35_0929 - methionyl tRNA synthetase 893 54.23 0 946849..947958 + 369 170682232 - EcSMS35_0930 - mrp protein 894 44.33 -1 948221..948502 + 93 170681954 - EcSMS35_0931 - hypothetical protein 895 41.25 -1 948798..949340 + 180 170682616 - EcSMS35_0932 - fimbrial protein 896 45.43 0 950111..952591 + 826 170684280 - EcSMS35_0934 - fimbrial usher protein 897 38.94 -2 952607..953641 + 344 170679988 - EcSMS35_0935 - hypothetical protein 898 49.56 0 953723..954061 - 112 170679655 - EcSMS35_0936 - hypothetical protein 899 51.76 0 954280..955104 - 274 170681275 rcnA EcSMS35_0937 - nickel/cobalt efflux protein RcnA 900 48.72 0 955225..955497 + 90 170681417 rcnR EcSMS35_0938 - transcriptional repressor RcnR 901 48.24 0 955827..957047 + 406 170682065 - EcSMS35_0939 - phage integrase family site specific recombinase 902 33.80 -2 957044..957898 + 284 170682889 - EcSMS35_0940 - hypothetical protein 903 48.44 0 958002..958226 + 74 170683381 - EcSMS35_0941 - AlpA family transcriptional regulator 904 47.86 0 958237..959055 + 272 170679986 - EcSMS35_0942 - hypothetical protein 905 57.35 +1 959075..959278 + 67 170680725 - EcSMS35_0943 - hypothetical protein 906 40.50 -1 959271..959591 + 106 170681192 - EcSMS35_0944 - hypothetical protein 907 41.67 -1 959598..959897 + 99 170681857 - EcSMS35_0945 - hypothetical protein 908 50.99 0 959894..961711 + 605 170680147 - EcSMS35_0946 - D5 family nucleoside triphosphatase 909 50.00 0 961999..962244 + 81 170683188 - EcSMS35_0947 - hypothetical protein 910 59.86 +1 962241..962666 + 141 170683723 - EcSMS35_0948 - single-strand binding protein family 911 43.62 -1 962689..962931 + 80 170682171 - EcSMS35_0949 - hypothetical protein 912 37.87 -2 962967..963473 - 168 170682671 - EcSMS35_0950 - hypothetical protein 913 50.85 0 963760..964929 + 389 170681140 - EcSMS35_0951 - HK97 family phage major capsid protein 914 52.05 0 964984..965544 + 186 170681758 - EcSMS35_0952 - HK97 family phage prohead protease 915 53.50 0 965546..966760 + 404 170684127 - EcSMS35_0953 - HK97 family phage portal protein 916 50.50 0 966753..967055 + 100 170679967 - EcSMS35_0954 - DNA packaging, phage QLRG family protein 917 57.14 +1 967055..967495 + 146 170680539 - EcSMS35_0955 - HNH endonuclease family protein 918 52.60 0 967757..968140 + 127 170680329 - EcSMS35_0956 - P27 family phage terminase small subunit 919 52.17 0 968124..969785 + 553 170683362 - EcSMS35_0957 - putative phage terminase, large subunit 920 52.13 0 969791..970072 + 93 170683728 - EcSMS35_0958 - hypothetical protein 921 40.74 -1 970562..970723 - 53 170682010 - EcSMS35_0959 - hypothetical protein 922 55.13 0 970862..971650 + 262 170682995 thiM EcSMS35_0960 - hydroxyethylthiazole kinase 923 55.43 0 971647..972447 + 266 170681061 thiD EcSMS35_0961 - phosphomethylpyrimidine kinase 924 47.62 0 972512..973330 + 272 170681659 - EcSMS35_0962 - glycosy hydrolase family protein 925 51.41 0 973382..974128 + 248 170681641 - EcSMS35_0964 - GntR family transcriptional regulator 926 56.73 +1 974102..975067 - 321 170683756 - EcSMS35_0963 - PfkB family kinase 927 55.22 0 975064..976068 - 334 170681153 - EcSMS35_0965 - ADP-ribosylglycohydrolase family protein 928 50.47 0 976065..977342 - 425 170680614 yegT EcSMS35_0966 - nucleoside transporter 929 51.85 0 977599..978651 + 350 170680106 fbaB EcSMS35_0967 - fructose-bisphosphate aldolase, class 1 930 53.33 0 978880..979734 + 284 170681634 - EcSMS35_0968 - tagatose bisphosphate family class II aldolase 931 49.41 0 979763..981025 + 420 170681136 - EcSMS35_0969 - putative tagatose-6-phosphate kinase 932 42.60 -1 981035..981487 + 150 170680637 gatA EcSMS35_0970 - PTS system, galactitol-specific IIB component 933 44.56 -1 981518..981802 + 94 170680100 gatB EcSMS35_0971 - PTS system, galactitol-specific IIB component 934 51.84 0 981806..983161 + 451 170683704 gatC EcSMS35_0972 - PTS system, galactitol-specific IIC component 935 49.28 0 983209..984249 + 346 170680364 gatD EcSMS35_0973 - galactitol-1-phosphate 5-dehydrogenase 936 46.92 0 984349..985128 + 259 170682006 gatR EcSMS35_0974 - galactitol utilization operon repressor 937 49.89 0 985210..986109 - 299 170683733 - EcSMS35_0975 - diacylglycerol kinase catalytic subunit 938 38.77 -2 986564..986839 + 91 170681865 - EcSMS35_0976 - hypothetical protein 939 54.33 0 987169..988530 - 453 170681214 - EcSMS35_0977 - U32 family peptidase 940 41.75 -1 988633..988929 - 98 170682935 - EcSMS35_0978 - RelE/ParE family plasmid stabilization system protein 941 50.79 0 988931..989182 - 83 170682278 - EcSMS35_0979 - CC2985 family addiction module antidote protein 942 48.05 0 989436..989768 - 110 170680967 - EcSMS35_0980 - hypothetical protein 943 53.80 0 989948..990670 - 240 170680336 baeR EcSMS35_0981 - DNA-binding response regulator BaeR 944 54.49 0 990667..992070 - 467 170680059 baeS EcSMS35_0982 - sensor histidine kinase BaeS 945 55.44 0 992067..993482 - 471 170682817 mdtD EcSMS35_0983 - multidrug resistance protein mdtD 946 56.82 +1 993483..996560 - 1025 170680004 mdtC EcSMS35_0984 - multidrug resistance protein MdtC 947 56.58 +1 996561..999683 - 1040 170680654 mdtB EcSMS35_0985 - multidrug resistance protein MdtB 948 54.97 0 999683..1000930 - 415 170683959 mdtA EcSMS35_0986 - multidrug resistance protein MdtA 949 51.97 0 1001819..1002478 + 219 170679715 - EcSMS35_0987 - von Willebrand factor type A domain-containing protein 950 49.63 0 1002556..1003236 + 226 170682031 - EcSMS35_0988 - hypothetical protein 951 39.46 -2 1003301..1003822 - 173 170682554 - EcSMS35_0989 - hypothetical protein 952 50.85 0 1003964..1005910 + 648 170681285 - EcSMS35_0990 - hypothetical protein 953 56.10 +1 1005923..1007275 - 450 170681799 - EcSMS35_0991 - hypothetical protein 954 55.12 0 1007409..1008257 + 282 170682302 alkA EcSMS35_0992 - DNA-3-methyladenine glycosylase 2 955 52.26 0 1008367..1011684 - 1105 170682376 - EcSMS35_0993 - sensory box-containing diguanylate cyclase 956 48.60 0 1012002..1012643 + 213 170680056 udk EcSMS35_0994 - uridine kinase 957 60.14 +1 1012735..1013316 + 193 170684104 dcd EcSMS35_0995 - deoxycytidine triphosphate deaminase 958 52.37 0 1013338..1015191 + 617 170681043 asmA EcSMS35_0996 - AsmA protein 959 43.64 -1 1015243..1015533 - 96 170680529 - EcSMS35_0997 - putative DNA-binding protein 960 40.99 -1 1015523..1015744 - 73 170682735 - EcSMS35_0998 - hypothetical protein 961 52.90 0 1016082..1017665 - 527 170682196 - EcSMS35_0999 - TerC family/CBS/transporter associated domain-containing protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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