version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 451 49.68 0 474621..474932 - 103 170680065 - EcSMS35_0467 - hypothetical protein 452 53.98 0 475117..476007 - 296 170682454 cyoE EcSMS35_0468 - protoheme IX farnesyltransferase 453 49.70 0 476019..476348 - 109 170683697 cyoD EcSMS35_0469 - cytochrome o ubiquinol oxidase, subunit IV 454 53.50 0 476348..476962 - 204 170680623 cyoC EcSMS35_0470 - cytochrome o ubiquinol oxidase, subunit III 455 53.16 0 476952..478943 - 663 170683544 cyoB EcSMS35_0471 - cytochrome o ubiquinol oxidase, subunit I 456 50.63 0 478965..479912 - 315 170683800 cyoA EcSMS35_0472 - cytochrome o ubiquinol oxidase, subunit II 457 34.03 -2 480214..480357 + 47 170681938 - EcSMS35_0473 - hypothetical protein 458 53.66 0 480372..481847 - 491 170682808 - EcSMS35_0474 - permease 459 50.78 0 481891..482469 - 192 170681187 - EcSMS35_0475 - putative lipoprotein 460 42.42 -1 482519..482650 - 43 170680924 - EcSMS35_0476 - hypothetical protein 461 48.43 0 482774..483091 + 105 170681580 - EcSMS35_0477 - protein BolA 462 46.26 0 483142..483288 + 48 170682286 - EcSMS35_0478 - hypothetical protein 463 50.96 0 483435..484733 + 432 170682129 tig EcSMS35_0479 - trigger factor 464 50.64 0 484979..485602 + 207 170683276 clpP EcSMS35_0480 - ATP-dependent Clp protease, proteolytic subunit ClpP 465 51.69 0 485728..487002 + 424 170682782 clpX EcSMS35_0481 - ATP-dependent Clp protease, ATP-binding subunit ClpX 466 52.19 0 487190..489544 + 784 170682239 lon EcSMS35_0482 - ATP-dependent protease La 467 49.45 0 489753..490025 + 90 170681712 hupB EcSMS35_0483 - DNA-binding protein HU-beta 468 51.92 0 490217..492088 + 623 170681699 ppiD EcSMS35_0484 - peptidylprolyl isomerase 469 54.84 0 492239..492610 + 123 170681053 - EcSMS35_0485 - competence protein ComEA 470 45.86 0 492716..493114 + 132 170679664 - EcSMS35_0486 - thioesterase family protein 471 51.29 0 493166..493861 - 231 170680140 queC EcSMS35_0487 - queuosine biosynthesis protein QueC 472 53.38 0 493926..495626 - 566 170683749 - EcSMS35_0488 - solute-binding family 5 protein 473 50.92 0 495726..496544 + 272 170683210 cof EcSMS35_0489 - hydrolase Cof 474 52.29 0 496697..497155 + 152 170683247 - EcSMS35_0490 - AsnC family transcriptional regulator 475 53.58 0 497185..498957 + 590 170682724 mdlA EcSMS35_0491 - multidrug resistance, ATP-binding protein mdlA 476 55.50 0 498950..500731 + 593 170679907 mdlB EcSMS35_0492 - multidrug ABC transporter, permease/ATP-binding protein 477 41.84 -1 500745..500885 - 46 170684075 - EcSMS35_0493 - hypothetical protein 478 50.74 0 500912..501250 + 112 170681150 glnK EcSMS35_0494 - nitrogen regulatory protein P-II 2 479 55.94 0 501280..502566 + 428 170680701 amt EcSMS35_0495 - ammonium transporter 480 52.50 0 502615..503475 - 286 170682584 tesB EcSMS35_0496 - acyl-CoA thioesterase II 481 54.10 0 503693..504265 + 190 170681958 - EcSMS35_0497 - putative lipoprotein 482 56.41 +1 504296..504607 - 103 170682578 - EcSMS35_0498 - methylated-DNA-[protein]-cysteine S-methyltransferase 483 48.59 0 504986..505339 + 117 170682038 - EcSMS35_0499 - hypothetical protein 484 47.84 0 505380..506930 - 516 170682326 - EcSMS35_0500 - cyclic diguanylate phosphodiesterase domain-containing protein 485 46.50 0 507094..507564 - 156 170684122 - EcSMS35_0501 - hypothetical protein 486 48.01 0 507680..508231 - 183 170683461 maa EcSMS35_0502 - maltose O-acetyltransferase 487 40.18 -1 508403..508621 - 72 170683314 - EcSMS35_0503 - haemolysin expression modulating protein 488 40.27 -1 508647..509021 - 124 170680298 - EcSMS35_0504 - hypothetical protein 489 53.75 0 509567..512716 - 1049 170680127 - EcSMS35_0505 - acriflavine resistance protein B 490 53.66 0 512739..513968 - 409 170681835 acrA EcSMS35_0506 - acriflavine resistance protein A 491 45.52 0 514074..514721 + 215 170681180 acrR EcSMS35_0507 - transcriptional regulator AcrR 492 51.83 0 514849..518211 + 1120 170682849 kefA EcSMS35_0508 - potassium efflux system KefA 493 48.15 0 518423..518584 - 53 170682816 - EcSMS35_0509 - hypothetical protein 494 59.47 +1 518598..519125 - 175 170680349 priC EcSMS35_0510 - primosomal replication protein N'' 495 51.85 0 519195..519572 + 125 170684286 - EcSMS35_0511 - hypothetical protein 496 53.80 0 519725..520276 + 183 170683752 apt EcSMS35_0512 - adenine phosphoribosyltransferase 497 57.30 +1 520405..522336 + 643 170681602 dnaX EcSMS35_0513 - DNA polymerase III, tau subunit 498 53.03 0 522389..522718 + 109 170682138 - EcSMS35_0514 - hypothetical protein 499 57.26 +1 522718..523323 + 201 170682989 recR EcSMS35_0515 - recombination protein RecR 500 53.07 0 523433..525307 + 624 170683488 htpG EcSMS35_0516 - chaperone protein HtpG 501 42.06 -1 525373..525498 - 41 170680190 - EcSMS35_0517 - hypothetical protein 502 51.47 0 525488..526132 + 214 170679682 adk EcSMS35_0518 - adenylate kinase 503 53.69 0 526264..527226 + 320 170680326 hemH EcSMS35_0520 - ferrochelatase 504 52.60 0 527223..528182 - 319 170680303 aes EcSMS35_0519 - acetyl esterase 505 52.11 0 528334..529638 + 434 170680689 gsk EcSMS35_0521 - inosine kinase 506 55.46 0 529768..531444 - 558 170681342 - EcSMS35_0522 - monovalent cation:proton antiporter-2 family protein 507 52.58 0 531682..532902 - 406 170682753 fsr EcSMS35_0523 - fosmidomycin resistance protein 508 50.88 0 533120..534772 + 550 170682853 ushA EcSMS35_0524 - UDP-sugar hydrolase/5'-nucleotidase 509 50.21 0 534809..535288 - 159 170683758 - EcSMS35_0525 - YbaK/EbsC protein 510 53.46 0 535492..536286 - 264 170683262 - EcSMS35_0526 - GumN family protein 511 58.48 +1 536590..539094 - 834 170680233 copA EcSMS35_0527 - copper-exporting ATPase 512 53.80 0 539357..540289 + 310 170679576 glsA1 EcSMS35_0528 - glutaminase 513 53.75 0 540292..541584 + 430 170681675 - EcSMS35_0529 - amino acid permease family protein 514 55.88 0 541709..542116 + 135 170680958 cueR EcSMS35_0530 - Cu(I)-responsive transcriptional regulator 515 43.45 -1 542120..542287 - 55 170680294 - EcSMS35_0531 - hypothetical protein 516 44.21 -1 542320..542742 - 140 170680588 - EcSMS35_0532 - putative lipoprotein 517 48.18 0 542796..543812 - 338 170684227 - EcSMS35_0533 - hypothetical protein 518 33.33 -2 543910..544032 - 40 170682499 - EcSMS35_0534 - hypothetical protein 519 34.88 -2 544057..544185 + 42 170682884 - EcSMS35_0535 - hypothetical protein 520 44.63 -1 544178..544540 + 120 170680942 - EcSMS35_0536 - hypothetical protein 521 58.82 +1 544643..545101 - 152 170680890 - EcSMS35_0537 - nodulation efficiency family protein 522 52.83 0 545098..546015 - 305 170681599 - EcSMS35_0538 - SPFH domain-containing protein/band 7 family protein 523 44.69 -1 546161..546838 + 225 170679660 - EcSMS35_0539 - ABC transporter, ATP-binding protein 524 46.03 0 546825..547604 + 259 170682778 - EcSMS35_0540 - hypothetical protein 525 55.91 0 547784..548638 - 284 170681623 ybbN EcSMS35_0541 - protein YbbN 526 54.09 0 548699..549469 - 256 170681540 - EcSMS35_0542 - short chain dehydrogenase/reductase family oxidoreductase 527 52.88 0 549498..550121 - 207 170679602 tesA EcSMS35_0543 - acyl-CoA thioesterase I 528 56.33 +1 550092..550778 + 228 170683791 - EcSMS35_0544 - ABC transporter, ATP-binding protein 529 58.22 +1 550775..553189 + 804 170683536 - EcSMS35_0545 - efflux ABC transporter, permease protein 530 55.53 0 553320..554414 - 364 170683025 selU EcSMS35_0546 - tRNA 2-selenouridine synthase 531 51.78 0 554483..555409 - 308 170682910 - EcSMS35_0547 - LysR family transcriptional regulator 532 50.93 0 555639..556121 + 160 170682305 allA EcSMS35_0548 - ureidoglycolate hydrolase 533 52.53 0 556244..557014 + 256 170680846 allR EcSMS35_0549 - transcriptional regulator AllR 534 53.09 0 557104..558885 + 593 170682793 gcl EcSMS35_0550 - glyoxylate carboligase 535 44.92 -1 558898..559674 + 258 170683109 hyi EcSMS35_0551 - hydroxypyruvate isomerase 536 51.08 0 559774..560652 + 292 170682413 - EcSMS35_0552 - 2-hydroxy-3-oxopropionate reductase 537 47.77 0 560822..562276 + 484 170680776 - EcSMS35_0553 - cytosine/purines/uracil/thiamine/allantoin family permease 538 52.13 0 562337..563698 + 453 170682646 allB EcSMS35_0554 - allantoinase 539 51.64 0 564855..565067 + 70 170683408 - EcSMS35_0556 - IS1 transposase orfA 540 54.76 0 565078..565581 + 167 170681291 - EcSMS35_0557 - IS1 transposase orfB 541 56.28 +1 565854..566999 + 381 170680619 - EcSMS35_0559 - glycerate kinase 542 46.56 0 567129..567914 - 261 170682104 - EcSMS35_0560 - hypothetical protein 543 51.54 0 567925..569160 - 411 170681093 allC EcSMS35_0561 - allantoate amidohydrolase 544 52.00 0 569182..570231 - 349 170683300 allD EcSMS35_0562 - ureidoglycolate dehydrogenase 545 55.82 0 570548..572215 + 555 170682785 - EcSMS35_0563 - acyl-CoA synthetase 546 57.38 +1 572225..573484 + 419 170680657 - EcSMS35_0564 - hypothetical protein 547 57.48 +1 573495..574310 + 271 170680073 - EcSMS35_0565 - hypothetical protein 548 57.16 +1 574307..575200 + 297 170681647 arcC EcSMS35_0566 - carbamate kinase 549 56.84 +1 575433..576500 - 355 170681139 purK EcSMS35_0567 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 550 58.82 +1 576497..577006 - 169 170682307 purE EcSMS35_0568 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0