version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 403 56.43 +1 428150..428608 + 152 170682072 - EcSMS35_0417 - hypothetical protein 404 52.76 0 428791..429315 + 174 170683799 aroL EcSMS35_0418 - shikimate kinase 405 48.44 0 429365..429556 + 63 170681907 - EcSMS35_0419 - hypothetical protein 406 46.17 0 429814..430491 + 225 170681240 aroM EcSMS35_0420 - AroM protein 407 51.58 0 430563..430847 + 94 170683956 - EcSMS35_0421 - hypothetical protein 408 49.10 0 431055..431333 + 92 170680752 - EcSMS35_0422 - hypothetical protein 409 51.43 0 431491..432402 - 303 170681396 rdgC EcSMS35_0423 - recombination-associated exonuclease RdgC 410 55.89 0 432527..433435 + 302 170682440 mak EcSMS35_0424 - manno(fructo)kinase 411 50.83 0 433575..434843 - 422 170683106 araJ EcSMS35_0425 - protein araJ 412 54.36 0 434885..438028 - 1047 170682477 sbcC EcSMS35_0426 - nuclease SbcCD, C subunit 413 52.78 0 438025..439227 - 400 170683006 sbcD EcSMS35_0427 - nuclease SbcCD, D subunit 414 46.21 0 439213..439344 + 43 170683648 - EcSMS35_0428 - hypothetical protein 415 54.49 0 439417..440106 + 229 170684203 phoB EcSMS35_0429 - phosphate regulon transcriptional regulatory protein PhoB 416 52.55 0 440164..441459 + 431 170681341 phoR EcSMS35_0430 - phosphate regulon sensor protein PhoR 417 44.00 -1 441672..441821 - 49 170680082 - EcSMS35_0431 - hypothetical protein 418 55.76 0 441866..443185 + 439 170680091 brnQ EcSMS35_0432 - branched-chain amino acid transport system II carrier protein 419 52.51 0 443258..444634 + 458 170680647 proY EcSMS35_0433 - proline-specific permease ProY 420 55.12 0 444790..446607 + 605 170681194 malZ EcSMS35_0434 - maltodextrin glucosidase 421 36.45 -2 446794..448239 + 481 170681654 - EcSMS35_0435 - hypothetical protein 422 53.61 0 448260..448841 - 193 170684080 acpH EcSMS35_0436 - [acyl-carrier-protein] phosphodiesterase 423 54.06 0 448934..450004 + 356 170682221 queA EcSMS35_0437 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 424 51.15 0 450059..451186 + 375 170680278 tgt EcSMS35_0438 - queuine tRNA-ribosyltransferase 425 49.55 0 451209..451541 + 110 170683289 yajC EcSMS35_0439 - preprotein translocase, YajC subunit 426 53.84 0 451569..453416 + 615 170680742 secD EcSMS35_0440 - protein-export membrane protein SecD 427 52.26 0 453427..454398 + 323 170684249 secF EcSMS35_0441 - protein-export membrane protein SecF 428 44.44 -1 454549..454791 + 80 170679872 - EcSMS35_0442 - CC2985 family addiction module antidote protein 429 45.74 0 454784..455065 + 93 170682953 - EcSMS35_0443 - RelE/ParE family plasmid stabilization system protein 430 46.84 0 455153..455500 + 115 170683294 - EcSMS35_0444 - HNH endonuclease family protein 431 50.17 0 455538..456422 - 294 170680575 tsx1 EcSMS35_0445 - nucleoside-specific channel-forming protein Tsx 432 52.03 0 457626..458834 + 402 170682659 - EcSMS35_0448 - IS605 family transposase orfB 433 51.11 0 459158..459607 + 149 170680845 nrdR EcSMS35_0449 - NrdR family transcriptional regulator 434 54.89 0 459611..460714 + 367 170680144 ribD EcSMS35_0450 - riboflavin biosynthesis protein RibD 435 51.80 0 460803..461273 + 156 170680589 ribH EcSMS35_0451 - 6,7-dimethyl-8-ribityllumazine synthase 436 54.52 0 461293..461712 + 139 170681155 nusB EcSMS35_0452 - transcription termination/antitermination factor NusB 437 55.01 0 461790..462767 + 325 170681628 thiL EcSMS35_0453 - thiamine-monophosphate kinase 438 52.75 0 462754..463263 + 169 170682164 pgpA EcSMS35_0454 - phosphatidylglycerophosphatase A 439 53.44 0 463317..464291 - 324 170682731 - EcSMS35_0455 - aldo/keto reductase family oxidoreductase 440 54.00 0 464346..466208 - 620 170680644 dxs EcSMS35_0456 - 1-deoxy-D-xylulose-5-phosphate synthase 441 53.89 0 466233..467132 - 299 170683582 ispA EcSMS35_0457 - geranyltranstransferase 442 55.14 0 467132..467374 - 80 170681913 xseB EcSMS35_0458 - exodeoxyribonuclease VII, small subunit 443 51.76 0 467580..469028 + 482 170679960 thiI EcSMS35_0459 - thiamine biosynthesis/tRNA modification protein ThiI 444 56.18 +1 469082..469672 - 196 170681670 thiJ EcSMS35_0460 - protein ThiJ 445 51.54 0 469635..470546 - 303 170681172 panE EcSMS35_0461 - 2-dehydropantoate 2-reductase 446 48.98 0 470714..471205 + 163 170680710 - EcSMS35_0462 - hypothetical protein 447 52.89 0 471333..472697 - 454 170679618 - EcSMS35_0463 - major facilitator transporter 448 25.00 -2 472840..472995 + 51 170681703 - EcSMS35_0464 - hypothetical protein 449 44.55 -1 473104..474039 + 311 170681040 - EcSMS35_0465 - hypothetical protein 450 43.65 -1 474095..474637 - 180 170680596 - EcSMS35_0466 - acetyltransferase 451 49.68 0 474621..474932 - 103 170680065 - EcSMS35_0467 - hypothetical protein 452 53.98 0 475117..476007 - 296 170682454 cyoE EcSMS35_0468 - protoheme IX farnesyltransferase 453 49.70 0 476019..476348 - 109 170683697 cyoD EcSMS35_0469 - cytochrome o ubiquinol oxidase, subunit IV 454 53.50 0 476348..476962 - 204 170680623 cyoC EcSMS35_0470 - cytochrome o ubiquinol oxidase, subunit III 455 53.16 0 476952..478943 - 663 170683544 cyoB EcSMS35_0471 - cytochrome o ubiquinol oxidase, subunit I 456 50.63 0 478965..479912 - 315 170683800 cyoA EcSMS35_0472 - cytochrome o ubiquinol oxidase, subunit II 457 34.03 -2 480214..480357 + 47 170681938 - EcSMS35_0473 - hypothetical protein 458 53.66 0 480372..481847 - 491 170682808 - EcSMS35_0474 - permease 459 50.78 0 481891..482469 - 192 170681187 - EcSMS35_0475 - putative lipoprotein 460 42.42 -1 482519..482650 - 43 170680924 - EcSMS35_0476 - hypothetical protein 461 48.43 0 482774..483091 + 105 170681580 - EcSMS35_0477 - protein BolA 462 46.26 0 483142..483288 + 48 170682286 - EcSMS35_0478 - hypothetical protein 463 50.96 0 483435..484733 + 432 170682129 tig EcSMS35_0479 - trigger factor 464 50.64 0 484979..485602 + 207 170683276 clpP EcSMS35_0480 - ATP-dependent Clp protease, proteolytic subunit ClpP 465 51.69 0 485728..487002 + 424 170682782 clpX EcSMS35_0481 - ATP-dependent Clp protease, ATP-binding subunit ClpX 466 52.19 0 487190..489544 + 784 170682239 lon EcSMS35_0482 - ATP-dependent protease La 467 49.45 0 489753..490025 + 90 170681712 hupB EcSMS35_0483 - DNA-binding protein HU-beta 468 51.92 0 490217..492088 + 623 170681699 ppiD EcSMS35_0484 - peptidylprolyl isomerase 469 54.84 0 492239..492610 + 123 170681053 - EcSMS35_0485 - competence protein ComEA 470 45.86 0 492716..493114 + 132 170679664 - EcSMS35_0486 - thioesterase family protein 471 51.29 0 493166..493861 - 231 170680140 queC EcSMS35_0487 - queuosine biosynthesis protein QueC 472 53.38 0 493926..495626 - 566 170683749 - EcSMS35_0488 - solute-binding family 5 protein 473 50.92 0 495726..496544 + 272 170683210 cof EcSMS35_0489 - hydrolase Cof 474 52.29 0 496697..497155 + 152 170683247 - EcSMS35_0490 - AsnC family transcriptional regulator 475 53.58 0 497185..498957 + 590 170682724 mdlA EcSMS35_0491 - multidrug resistance, ATP-binding protein mdlA 476 55.50 0 498950..500731 + 593 170679907 mdlB EcSMS35_0492 - multidrug ABC transporter, permease/ATP-binding protein 477 41.84 -1 500745..500885 - 46 170684075 - EcSMS35_0493 - hypothetical protein 478 50.74 0 500912..501250 + 112 170681150 glnK EcSMS35_0494 - nitrogen regulatory protein P-II 2 479 55.94 0 501280..502566 + 428 170680701 amt EcSMS35_0495 - ammonium transporter 480 52.50 0 502615..503475 - 286 170682584 tesB EcSMS35_0496 - acyl-CoA thioesterase II 481 54.10 0 503693..504265 + 190 170681958 - EcSMS35_0497 - putative lipoprotein 482 56.41 +1 504296..504607 - 103 170682578 - EcSMS35_0498 - methylated-DNA-[protein]-cysteine S-methyltransferase 483 48.59 0 504986..505339 + 117 170682038 - EcSMS35_0499 - hypothetical protein 484 47.84 0 505380..506930 - 516 170682326 - EcSMS35_0500 - cyclic diguanylate phosphodiesterase domain-containing protein 485 46.50 0 507094..507564 - 156 170684122 - EcSMS35_0501 - hypothetical protein 486 48.01 0 507680..508231 - 183 170683461 maa EcSMS35_0502 - maltose O-acetyltransferase 487 40.18 -1 508403..508621 - 72 170683314 - EcSMS35_0503 - haemolysin expression modulating protein 488 40.27 -1 508647..509021 - 124 170680298 - EcSMS35_0504 - hypothetical protein 489 53.75 0 509567..512716 - 1049 170680127 - EcSMS35_0505 - acriflavine resistance protein B 490 53.66 0 512739..513968 - 409 170681835 acrA EcSMS35_0506 - acriflavine resistance protein A 491 45.52 0 514074..514721 + 215 170681180 acrR EcSMS35_0507 - transcriptional regulator AcrR 492 51.83 0 514849..518211 + 1120 170682849 kefA EcSMS35_0508 - potassium efflux system KefA 493 48.15 0 518423..518584 - 53 170682816 - EcSMS35_0509 - hypothetical protein 494 59.47 +1 518598..519125 - 175 170680349 priC EcSMS35_0510 - primosomal replication protein N'' 495 51.85 0 519195..519572 + 125 170684286 - EcSMS35_0511 - hypothetical protein 496 53.80 0 519725..520276 + 183 170683752 apt EcSMS35_0512 - adenine phosphoribosyltransferase 497 57.30 +1 520405..522336 + 643 170681602 dnaX EcSMS35_0513 - DNA polymerase III, tau subunit 498 53.03 0 522389..522718 + 109 170682138 - EcSMS35_0514 - hypothetical protein 499 57.26 +1 522718..523323 + 201 170682989 recR EcSMS35_0515 - recombination protein RecR 500 53.07 0 523433..525307 + 624 170683488 htpG EcSMS35_0516 - chaperone protein HtpG 501 42.06 -1 525373..525498 - 41 170680190 - EcSMS35_0517 - hypothetical protein 502 51.47 0 525488..526132 + 214 170679682 adk EcSMS35_0518 - adenylate kinase 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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