version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 354 53.58 0 380607..381890 + 427 170683266 codA EcSMS35_0368 - cytosine deaminase 355 55.11 0 382023..382922 - 299 170683944 cynR EcSMS35_0369 - transcriptional regulator cynR 356 57.88 +1 383032..383691 + 219 170682028 cynT EcSMS35_0370 - carbonic anhydrase 357 52.02 0 383722..384192 + 156 170683024 cynS EcSMS35_0371 - cyanate hydratase 358 58.27 +1 384225..385379 + 384 170684294 cynX EcSMS35_0372 - cyanate transport protein CynX 359 42.35 -1 385467..386087 - 206 170682300 lacA EcSMS35_0373 - galactoside O-acetyltransferase LacA 360 45.77 0 386144..387397 - 417 170680767 lacY EcSMS35_0374 - lactose permease 361 56.26 +1 387449..390523 - 1024 170681400 lacZ EcSMS35_0375 - beta-galactosidase 362 55.96 0 390646..391728 - 360 170679780 lacI EcSMS35_0376 - lactose operon repressor 363 55.44 0 391805..392650 - 281 170680396 mhpR EcSMS35_0377 - mhp operon transcriptional activator 364 56.76 +1 392829..394493 + 554 170683478 mhpA EcSMS35_0378 - 3-(3-hydroxy-phenyl)propionate hydroxylase 365 57.78 +1 394495..395439 + 314 170684010 mhpB EcSMS35_0379 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 366 54.56 0 395457..396323 + 288 170683466 mhpC EcSMS35_0380 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 367 56.79 +1 396333..397142 + 269 170684013 mhpD EcSMS35_0381 - 2-keto-4-pentenoate hydratase 368 54.89 0 397139..398089 + 316 170682483 mhpF EcSMS35_0382 - acetaldehyde dehydrogenase 369 56.21 +1 398086..399099 + 337 170682868 mhpE EcSMS35_0383 - 4-hydroxy-2-oxovalerate aldolase 370 58.17 +1 399275..400486 + 403 170680668 - EcSMS35_0384 - putative 3-hydroxyphenylpropionic acid transporter 371 47.59 0 400588..401127 + 179 170683415 - EcSMS35_0385 - hypothetical protein 372 48.20 0 401252..402085 - 277 170684242 fghA2 EcSMS35_0386 - S-formylglutathione hydrolase 373 53.78 0 402177..403286 - 369 170682377 adhC EcSMS35_0387 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 374 53.26 0 403321..403596 - 91 170680784 - EcSMS35_0388 - hypothetical protein 375 50.13 0 403781..404554 - 257 170681412 - EcSMS35_0389 - hypothetical protein 376 45.80 0 404556..404996 - 146 170679736 - EcSMS35_0390 - putative acyltransferase 377 50.04 0 405115..406311 - 398 170680221 - EcSMS35_0391 - glycosyl transferase, group 2 family protein 378 43.90 -1 406321..406992 - 223 170680287 - EcSMS35_0392 - putative GlcNAc-PI de-N-acetylase 379 32.78 -2 407430..407609 - 59 170680834 - EcSMS35_0393 - hypothetical protein 380 56.28 +1 407608..408570 + 320 170684058 tauA EcSMS35_0394 - taurine ABC transporter, periplasmic taurine-binding protein 381 56.38 +1 408584..409351 + 255 170679852 tauB EcSMS35_0395 - taurine ABC transporter, ATP-binding protein 382 57.97 +1 409348..410175 + 275 170683056 tauC EcSMS35_0396 - taurine uptake ABC transporter, permease protein 383 54.93 0 410172..411023 + 283 170683535 tauD EcSMS35_0397 - taurine dioxygenase 384 53.74 0 411063..412037 - 324 170680798 hemB EcSMS35_0398 - delta-aminolevulinic acid dehydratase 385 42.31 -1 412563..413420 + 285 170682512 - EcSMS35_0400 - hypothetical protein 386 54.97 0 413260..414165 - 301 170682518 - EcSMS35_0399 - IS2 transposase orfB 387 50.61 0 414123..414533 - 136 170682327 - EcSMS35_0401 - IS2 transposase orfA 388 46.90 0 414664..416808 + 714 170683055 - EcSMS35_0402 - outer membrane autotransporter 389 39.42 -2 416894..417517 + 207 170679630 - EcSMS35_0403 - hypothetical protein 390 55.18 0 417518..418675 - 385 170680606 ampH EcSMS35_0404 - penicillin-binding protein AmpH 391 45.13 0 418813..419007 + 64 170681123 - EcSMS35_0405 - hypothetical protein 392 51.27 0 419027..420247 + 406 170681620 smbA EcSMS35_0406 - protein SbmA 393 53.88 0 420260..421354 + 364 170682252 - EcSMS35_0407 - putative lipoprotein 394 51.78 0 421412..421720 - 102 170682962 - EcSMS35_0408 - hypothetical protein 395 48.36 0 421980..422192 + 70 170683615 - EcSMS35_0409 - hypothetical protein 396 51.78 0 422216..423310 - 364 170684315 ddlA EcSMS35_0410 - D-alanine--D-alanine ligase A 397 34.80 -2 423388..423591 + 67 170679659 - EcSMS35_0411 - hypothetical protein 398 45.21 0 423773..424033 + 86 170680271 - EcSMS35_0412 - hypothetical protein 399 53.81 0 424133..425548 + 471 170680523 phoA EcSMS35_0413 - alkaline phosphatase 400 48.29 0 425667..425987 + 106 170680000 psiF EcSMS35_0414 - phosphate starvation-inducible protein PsiF 401 53.85 0 426089..427204 + 371 170683904 - EcSMS35_0415 - MASE2 domain/diguanylate cyclase 402 54.57 0 427221..428030 - 269 170683285 proC EcSMS35_0416 - pyrroline-5-carboxylate reductase 403 56.43 +1 428150..428608 + 152 170682072 - EcSMS35_0417 - hypothetical protein 404 52.76 0 428791..429315 + 174 170683799 aroL EcSMS35_0418 - shikimate kinase 405 48.44 0 429365..429556 + 63 170681907 - EcSMS35_0419 - hypothetical protein 406 46.17 0 429814..430491 + 225 170681240 aroM EcSMS35_0420 - AroM protein 407 51.58 0 430563..430847 + 94 170683956 - EcSMS35_0421 - hypothetical protein 408 49.10 0 431055..431333 + 92 170680752 - EcSMS35_0422 - hypothetical protein 409 51.43 0 431491..432402 - 303 170681396 rdgC EcSMS35_0423 - recombination-associated exonuclease RdgC 410 55.89 0 432527..433435 + 302 170682440 mak EcSMS35_0424 - manno(fructo)kinase 411 50.83 0 433575..434843 - 422 170683106 araJ EcSMS35_0425 - protein araJ 412 54.36 0 434885..438028 - 1047 170682477 sbcC EcSMS35_0426 - nuclease SbcCD, C subunit 413 52.78 0 438025..439227 - 400 170683006 sbcD EcSMS35_0427 - nuclease SbcCD, D subunit 414 46.21 0 439213..439344 + 43 170683648 - EcSMS35_0428 - hypothetical protein 415 54.49 0 439417..440106 + 229 170684203 phoB EcSMS35_0429 - phosphate regulon transcriptional regulatory protein PhoB 416 52.55 0 440164..441459 + 431 170681341 phoR EcSMS35_0430 - phosphate regulon sensor protein PhoR 417 44.00 -1 441672..441821 - 49 170680082 - EcSMS35_0431 - hypothetical protein 418 55.76 0 441866..443185 + 439 170680091 brnQ EcSMS35_0432 - branched-chain amino acid transport system II carrier protein 419 52.51 0 443258..444634 + 458 170680647 proY EcSMS35_0433 - proline-specific permease ProY 420 55.12 0 444790..446607 + 605 170681194 malZ EcSMS35_0434 - maltodextrin glucosidase 421 36.45 -2 446794..448239 + 481 170681654 - EcSMS35_0435 - hypothetical protein 422 53.61 0 448260..448841 - 193 170684080 acpH EcSMS35_0436 - [acyl-carrier-protein] phosphodiesterase 423 54.06 0 448934..450004 + 356 170682221 queA EcSMS35_0437 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 424 51.15 0 450059..451186 + 375 170680278 tgt EcSMS35_0438 - queuine tRNA-ribosyltransferase 425 49.55 0 451209..451541 + 110 170683289 yajC EcSMS35_0439 - preprotein translocase, YajC subunit 426 53.84 0 451569..453416 + 615 170680742 secD EcSMS35_0440 - protein-export membrane protein SecD 427 52.26 0 453427..454398 + 323 170684249 secF EcSMS35_0441 - protein-export membrane protein SecF 428 44.44 -1 454549..454791 + 80 170679872 - EcSMS35_0442 - CC2985 family addiction module antidote protein 429 45.74 0 454784..455065 + 93 170682953 - EcSMS35_0443 - RelE/ParE family plasmid stabilization system protein 430 46.84 0 455153..455500 + 115 170683294 - EcSMS35_0444 - HNH endonuclease family protein 431 50.17 0 455538..456422 - 294 170680575 tsx1 EcSMS35_0445 - nucleoside-specific channel-forming protein Tsx 432 52.03 0 457626..458834 + 402 170682659 - EcSMS35_0448 - IS605 family transposase orfB 433 51.11 0 459158..459607 + 149 170680845 nrdR EcSMS35_0449 - NrdR family transcriptional regulator 434 54.89 0 459611..460714 + 367 170680144 ribD EcSMS35_0450 - riboflavin biosynthesis protein RibD 435 51.80 0 460803..461273 + 156 170680589 ribH EcSMS35_0451 - 6,7-dimethyl-8-ribityllumazine synthase 436 54.52 0 461293..461712 + 139 170681155 nusB EcSMS35_0452 - transcription termination/antitermination factor NusB 437 55.01 0 461790..462767 + 325 170681628 thiL EcSMS35_0453 - thiamine-monophosphate kinase 438 52.75 0 462754..463263 + 169 170682164 pgpA EcSMS35_0454 - phosphatidylglycerophosphatase A 439 53.44 0 463317..464291 - 324 170682731 - EcSMS35_0455 - aldo/keto reductase family oxidoreductase 440 54.00 0 464346..466208 - 620 170680644 dxs EcSMS35_0456 - 1-deoxy-D-xylulose-5-phosphate synthase 441 53.89 0 466233..467132 - 299 170683582 ispA EcSMS35_0457 - geranyltranstransferase 442 55.14 0 467132..467374 - 80 170681913 xseB EcSMS35_0458 - exodeoxyribonuclease VII, small subunit 443 51.76 0 467580..469028 + 482 170679960 thiI EcSMS35_0459 - thiamine biosynthesis/tRNA modification protein ThiI 444 56.18 +1 469082..469672 - 196 170681670 thiJ EcSMS35_0460 - protein ThiJ 445 51.54 0 469635..470546 - 303 170681172 panE EcSMS35_0461 - 2-dehydropantoate 2-reductase 446 48.98 0 470714..471205 + 163 170680710 - EcSMS35_0462 - hypothetical protein 447 52.89 0 471333..472697 - 454 170679618 - EcSMS35_0463 - major facilitator transporter 448 25.00 -2 472840..472995 + 51 170681703 - EcSMS35_0464 - hypothetical protein 449 44.55 -1 473104..474039 + 311 170681040 - EcSMS35_0465 - hypothetical protein 450 43.65 -1 474095..474637 - 180 170680596 - EcSMS35_0466 - acetyltransferase 451 49.68 0 474621..474932 - 103 170680065 - EcSMS35_0467 - hypothetical protein 452 53.98 0 475117..476007 - 296 170682454 cyoE EcSMS35_0468 - protoheme IX farnesyltransferase 453 49.70 0 476019..476348 - 109 170683697 cyoD EcSMS35_0469 - cytochrome o ubiquinol oxidase, subunit IV 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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