version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3927 51.95 0 4173444..4174109 + 221 170684177 - EcSMS35_4082 - HAD family hydrolase 3928 31.22 -2 4174246..4176654 - 802 170682228 - EcSMS35_4083 - hypothetical protein 3929 42.11 -1 4176786..4176899 - 37 170682949 - EcSMS35_4084 - hypothetical protein 3930 29.46 -2 4176955..4178142 + 395 170681129 - EcSMS35_4085 - hypothetical protein 3931 30.32 -2 4178612..4181101 - 829 170681631 - EcSMS35_4086 - hypothetical protein 3932 28.07 -2 4181261..4181374 - 37 170682776 - EcSMS35_4087 - hypothetical protein 3933 52.75 0 4181528..4182253 - 241 170683229 phoU EcSMS35_4088 - phosphate transport system regulatory protein PhoU 3934 52.84 0 4182268..4183041 - 257 170683780 pstB EcSMS35_4089 - phosphate ABC transporter, ATP-binding protein 3935 55.89 0 4183131..4184021 - 296 170679588 pstA EcSMS35_4090 - phosphate ABC transporter, permease protein PstA 3936 54.90 0 4184021..4184980 - 319 170680226 pstC EcSMS35_4091 - phosphate ABC transporter, permease protein PstC 3937 51.59 0 4185067..4186107 - 346 170680926 pstS EcSMS35_4092 - phosphate ABC transporter, periplasmic phosphate-binding protein PstS 3938 41.08 -1 4186355..4187425 - 356 170683702 lpfD EcSMS35_4093 - long polar fimbrial operon protein LpfD 3939 47.52 0 4187436..4189958 - 840 170684256 lpfC EcSMS35_4094 - long polar fimbrial operon protein LpfC 3940 43.85 -1 4189983..4190714 - 243 170681205 lpfB EcSMS35_4095 - long polar fimbrial operon protein LpfB 3941 48.87 0 4190762..4191334 - 190 170680528 lpfA EcSMS35_4096 - long polar fimbrial operon protein LpfA 3942 53.33 0 4191642..4193471 - 609 170681402 glmS EcSMS35_4097 - glutamine-fructose-6-phosphate transaminase (isomerizing) 3943 53.46 0 4193633..4195003 - 456 170679754 glmU EcSMS35_4098 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3944 55.00 0 4195352..4195771 - 139 170682907 atpC EcSMS35_4099 - ATP synthase F1, epsilon subunit 3945 54.88 0 4195792..4197174 - 460 170681189 atpD EcSMS35_4100 - ATP synthase F1, beta subunit 3946 53.47 0 4197201..4198064 - 287 170684229 atpG EcSMS35_4101 - ATP synthase F1, gamma subunit 3947 53.44 0 4198115..4199656 - 513 170682498 atpA EcSMS35_4102 - ATP synthase F1, alpha subunit 3948 51.87 0 4199669..4200202 - 177 170679909 atpH EcSMS35_4103 - ATP synthase F1, delta subunit 3949 52.65 0 4200217..4200687 - 156 170680530 atpF EcSMS35_4104 - ATP synthase F0, B subunit 3950 54.17 0 4200749..4200988 - 79 170681273 atpE EcSMS35_4105 - ATP synthase F0, C subunit 3951 50.49 0 4201035..4201850 - 271 170681900 atpB EcSMS35_4106 - ATP synthase F0, A subunit 3952 52.05 0 4201859..4202077 - 72 170683722 atpI EcSMS35_4107 - ATP synthase F0, I subunit 3953 48.40 0 4202856..4203479 - 207 170682169 gidB EcSMS35_4108 - methyltransferase GidB 3954 54.71 0 4203543..4205432 - 629 170680590 gidA EcSMS35_4109 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3955 49.55 0 4205811..4206254 - 147 170683215 mioC EcSMS35_4110 - MioC protein 3956 49.24 0 4206344..4206802 - 152 170680155 asnC EcSMS35_4111 - regulatory protein AsnC 3957 55.79 0 4206954..4207946 + 330 170683630 asnA EcSMS35_4112 - aspartate--ammonia ligase 3958 52.96 0 4207951..4209402 - 483 170683973 - EcSMS35_4113 - ViaA family protein 3959 49.83 0 4209396..4210892 - 498 170679686 - EcSMS35_4114 - ATPase 3960 51.63 0 4211115..4212983 + 622 170682987 kup EcSMS35_4115 - potassium uptake protein 3961 46.53 0 4213138..4213569 + 143 170683192 rbsD EcSMS35_4116 - cytoplasmic D-ribose-binding protein RbsD 3962 51.26 0 4213577..4215082 + 501 170682444 rbsA EcSMS35_4117 - ribose ABC transporter, ATP-binding protein 3963 53.21 0 4215087..4216052 + 321 170683105 rbsC EcSMS35_4118 - ribose ABC transporter, permease protein 3964 52.97 0 4216077..4216967 + 296 170681554 rbsB EcSMS35_4119 - ribose ABC transporter, periplasmic ribose-binding protein 3965 52.17 0 4217078..4218022 + 314 170681947 rbsK EcSMS35_4120 - ribokinase 3966 50.45 0 4218026..4219018 + 330 170680451 rbsR EcSMS35_4122 - ribose operon repressor 3967 49.44 0 4218984..4220411 - 475 170679741 - EcSMS35_4121 - DHA2 family drug:H+ antiporter-1 3968 49.21 0 4220434..4221126 - 230 170681987 - EcSMS35_4123 - GntR family transcriptional regulator 3969 48.21 0 4226916..4227755 - 279 170682999 hdfR EcSMS35_4131 - transcriptional regulator HdfR 3970 48.67 0 4227874..4228212 + 112 170682455 - EcSMS35_4132 - hypothetical protein 3971 51.08 0 4228237..4229757 - 506 170680083 - EcSMS35_4133 - AAA family ATPase 3972 54.10 0 4230348..4231994 + 548 170684034 ilvG EcSMS35_4134 - acetolactate synthase, large subunit, isozyme II 3973 49.62 0 4231991..4232254 + 87 170681121 ilvM EcSMS35_4135 - acetolactate synthase, isozyme II, small subunit 3974 55.05 0 4232274..4233203 + 309 170680330 ilvE EcSMS35_4136 - branched-chain-amino-acid transaminase 3975 56.35 +1 4233268..4235118 + 616 170682714 ilvD EcSMS35_4137 - dihydroxy-acid dehydratase 3976 58.07 +1 4235118..4236665 + 515 170680546 ilvA EcSMS35_4139 - threonine ammonia-lyase, biosynthetic 3977 57.13 +1 4236662..4237552 - 296 170682183 ilvY EcSMS35_4138 - transcriptional regulator IlvY 3978 53.73 0 4237702..4239177 + 491 170683905 ilvC EcSMS35_4140 - ketol-acid reductoisomerase 3979 50.00 0 4239223..4239504 - 93 170682547 ppiC EcSMS35_4141 - peptidyl-prolyl cis-trans isomerase C 3980 54.01 0 4240324..4242345 + 673 170680827 rep EcSMS35_4142 - ATP-dependent DNA helicase Rep 3981 53.40 0 4242392..4243876 - 494 170681890 gppA EcSMS35_4143 - guanosine-5'-triphosphate,3'-diphosphate diphosphatase 3982 52.37 0 4244012..4245277 - 421 170679910 rhlB EcSMS35_4144 - ATP-dependent RNA helicase RhlB 3983 50.91 0 4245408..4245737 + 109 170680473 trx EcSMS35_4145 - thioredoxin 3984 50.63 0 4246064..4247323 + 419 170683673 rho EcSMS35_4146 - transcription termination factor Rho 3985 41.55 -1 4247333..4247551 + 72 170684201 - EcSMS35_4147 - hypothetical protein 3986 48.82 0 4247563..4248666 + 367 170682041 wecA EcSMS35_4148 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3987 52.53 0 4248678..4249724 + 348 170682919 - EcSMS35_4149 - lipopolysaccharide biosynthesis protein WzzE 3988 52.87 0 4249780..4250910 + 376 170682256 - EcSMS35_4150 - UDP-N-acetylglucosamine 2-epimerase 3989 53.68 0 4250907..4252169 + 420 170684251 wecC EcSMS35_4151 - UDP-N-acetyl-D-mannosamine dehydrogenase 3990 53.65 0 4252169..4253236 + 355 170683610 rfbB2 EcSMS35_4152 - dTDP-glucose 4,6-dehydratase 3991 54.88 0 4253255..4254136 + 293 170680051 rfbA EcSMS35_4153 - glucose-1-phosphate thymidylyltransferase 3992 55.11 0 4254114..4254788 + 224 170681802 wecD EcSMS35_4154 - TDP-D-fucosamine acetyltransferase 3993 54.64 0 4254793..4255923 + 376 170681601 wecE EcSMS35_4155 - TDP-4-keto-6-deoxy-D-glucose transaminase 3994 53.24 0 4255925..4257175 + 416 170680789 - EcSMS35_4156 - polysaccharide biosynthesis protein 3995 52.50 0 4257172..4258251 + 359 170682089 wecF EcSMS35_4157 - TDP-Fuc4NAc:lipid II Fuc4Nac transferase 3996 52.18 0 4258248..4259600 + 450 170683948 wzyE EcSMS35_4158 - ECA biosynthesis protein WzyE 3997 53.98 0 4259603..4260343 + 246 170683664 - EcSMS35_4159 - WecB/TagA/CpsF family glycosyl transferase 3998 53.25 0 4260534..4261919 + 461 170680511 - EcSMS35_4160 - amino acid permease family protein 3999 50.32 0 4262605..4263840 + 411 170681829 aslB EcSMS35_4165 - arylsulfatase-activating protein AslB 4000 53.32 0 4263998..4265653 - 551 170681296 aslA EcSMS35_4166 - arylsulfatase 4001 55.56 0 4266317..4267513 - 398 170682558 hemY EcSMS35_4167 - HemY protein 4002 53.52 0 4267516..4268709 - 397 170682020 - EcSMS35_4168 - putative uroporphyrin-III C-methyltransferase 4003 53.17 0 4268731..4269471 - 246 170683392 hemD EcSMS35_4169 - uroporphyrinogen-III synthase 4004 56.32 +1 4269468..4270424 - 318 170680193 hemC EcSMS35_4170 - porphobilinogen deaminase 4005 52.22 0 4270796..4273342 + 848 170679613 cyaA EcSMS35_4171 - adenylate cyclase, class I 4006 52.34 0 4273382..4273702 - 106 170681576 cyaY EcSMS35_4172 - iron donor protein CyaY 4007 48.11 0 4273750..4274013 - 87 170682654 - EcSMS35_4173 - putative lipoprotein 4008 52.45 0 4274172..4274375 + 67 170681974 - EcSMS35_4174 - putative lipoprotein 4009 55.15 0 4274412..4275236 + 274 170683935 dapF EcSMS35_4175 - diaminopimelate epimerase 4010 55.79 0 4275233..4275940 + 235 170683253 - EcSMS35_4176 - hypothetical protein 4011 54.85 0 4275937..4276833 + 298 170683603 xerC EcSMS35_4177 - tyrosine recombinase XerC 4012 56.21 +1 4276833..4277549 + 238 170680482 - EcSMS35_4178 - HAD-superfamily hydrolase 4013 57.51 +1 4277633..4279795 + 720 170679582 uvrD EcSMS35_4179 - DNA helicase II 4014 47.40 0 4279850..4280752 - 300 170681390 - EcSMS35_4180 - hypothetical protein 4015 46.93 0 4280835..4281599 - 254 170680837 - EcSMS35_4181 - hypothetical protein 4016 42.98 -1 4281612..4281725 + 37 170682665 - EcSMS35_4182 - hypothetical protein 4017 53.00 0 4281969..4282919 + 316 170680198 corA EcSMS35_4183 - magnesium and cobalt transport protein CorA 4018 34.14 -2 4282955..4283452 - 165 170679716 - EcSMS35_4184 - hypothetical protein 4019 32.86 -2 4283449..4284297 - 282 170684029 - EcSMS35_4185 - hypothetical protein 4020 50.62 0 4284607..4285497 - 296 170683494 rarD EcSMS35_4186 - RarD protein 4021 53.21 0 4285549..4286016 - 155 170679742 - EcSMS35_4187 - thioesterase family protein 4022 51.03 0 4286181..4287050 + 289 170681373 pldA EcSMS35_4188 - phospholipase A1 4023 55.01 0 4287169..4289004 + 611 170680861 recQ EcSMS35_4189 - ATP-dependent DNA helicase RecQ 4024 52.17 0 4289068..4289688 + 206 170683014 rhtC EcSMS35_4190 - threonine efflux protein 4025 52.01 0 4289750..4290370 - 206 170682422 rhtB EcSMS35_4191 - homoserine/homoserine lactone efflux protein 4026 53.18 0 4290481..4291503 + 340 170684143 pldB EcSMS35_4192 - lysophospholipase L2 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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