version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 330 57.84 +1 352507..353979 - 490 170681572 betB EcSMS35_0343 - betaine aldehyde dehydrogenase 331 56.46 +1 353993..354580 - 195 170680533 betI EcSMS35_0344 - transcriptional repressor BetI 332 55.26 0 354709..356742 + 677 170680230 betT EcSMS35_0345 - BCCT family transporter 333 45.55 0 357618..358706 + 362 170679658 - EcSMS35_0346 - LuxR-family transcriptional regulator 334 49.30 0 358748..359680 - 310 170683566 - EcSMS35_0347 - LysR family transcriptional regulator 335 53.01 0 359772..360269 - 165 170682594 - EcSMS35_0348 - hypothetical protein 336 46.86 0 360527..361132 + 201 170682347 - EcSMS35_0349 - ankyrin repeat-containing protein 337 46.99 0 361172..362035 + 287 170681656 - EcSMS35_0350 - hypothetical protein 338 55.17 0 362025..363572 + 515 170683991 - EcSMS35_0351 - acyl-CoA synthetase 339 58.00 +1 363572..364990 + 472 170682165 - EcSMS35_0352 - hypothetical protein 340 56.47 +1 365085..366035 + 316 170682847 - EcSMS35_0353 - carbamate kinase family protein 341 56.47 +1 366045..367427 + 460 170681260 - EcSMS35_0354 - amidohydrolase family protein 342 48.55 0 367651..367788 + 45 170680074 - EcSMS35_0355 - hypothetical protein 343 53.62 0 367804..368853 + 349 170680738 - EcSMS35_0356 - zinc-binding dehydrogenase family oxidoreductase 344 39.58 -1 369096..369911 + 271 170680386 - EcSMS35_0357 - hypothetical protein 345 50.71 0 370587..371219 - 210 170683132 - EcSMS35_0359 - putative homoserine/threonine efflux protein 346 39.13 -2 371405..371680 + 91 170683473 - EcSMS35_0360 - hypothetical protein 347 47.15 0 371707..371829 + 40 170679785 - EcSMS35_0362 - hypothetical protein 348 55.45 0 371781..373367 - 528 170684111 prpR EcSMS35_0361 - propionate catabolism operon regulatory protein PrpR 349 56.68 +1 373606..374496 + 296 170679897 prpB EcSMS35_0363 - methylisocitrate lyase 350 55.56 0 374541..375710 + 389 170680874 prpC EcSMS35_0364 - 2-methylcitrate synthase 351 56.89 +1 375744..377195 + 483 170681387 prpD EcSMS35_0365 - 2-methylcitrate dehydratase 352 57.82 +1 377235..379121 + 628 170679862 prpE EcSMS35_0366 - propionate--CoA ligase 353 53.81 0 379358..380617 + 419 170680347 codB EcSMS35_0367 - cytosine permease 354 53.58 0 380607..381890 + 427 170683266 codA EcSMS35_0368 - cytosine deaminase 355 55.11 0 382023..382922 - 299 170683944 cynR EcSMS35_0369 - transcriptional regulator cynR 356 57.88 +1 383032..383691 + 219 170682028 cynT EcSMS35_0370 - carbonic anhydrase 357 52.02 0 383722..384192 + 156 170683024 cynS EcSMS35_0371 - cyanate hydratase 358 58.27 +1 384225..385379 + 384 170684294 cynX EcSMS35_0372 - cyanate transport protein CynX 359 42.35 -1 385467..386087 - 206 170682300 lacA EcSMS35_0373 - galactoside O-acetyltransferase LacA 360 45.77 0 386144..387397 - 417 170680767 lacY EcSMS35_0374 - lactose permease 361 56.26 +1 387449..390523 - 1024 170681400 lacZ EcSMS35_0375 - beta-galactosidase 362 55.96 0 390646..391728 - 360 170679780 lacI EcSMS35_0376 - lactose operon repressor 363 55.44 0 391805..392650 - 281 170680396 mhpR EcSMS35_0377 - mhp operon transcriptional activator 364 56.76 +1 392829..394493 + 554 170683478 mhpA EcSMS35_0378 - 3-(3-hydroxy-phenyl)propionate hydroxylase 365 57.78 +1 394495..395439 + 314 170684010 mhpB EcSMS35_0379 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 366 54.56 0 395457..396323 + 288 170683466 mhpC EcSMS35_0380 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 367 56.79 +1 396333..397142 + 269 170684013 mhpD EcSMS35_0381 - 2-keto-4-pentenoate hydratase 368 54.89 0 397139..398089 + 316 170682483 mhpF EcSMS35_0382 - acetaldehyde dehydrogenase 369 56.21 +1 398086..399099 + 337 170682868 mhpE EcSMS35_0383 - 4-hydroxy-2-oxovalerate aldolase 370 58.17 +1 399275..400486 + 403 170680668 - EcSMS35_0384 - putative 3-hydroxyphenylpropionic acid transporter 371 47.59 0 400588..401127 + 179 170683415 - EcSMS35_0385 - hypothetical protein 372 48.20 0 401252..402085 - 277 170684242 fghA2 EcSMS35_0386 - S-formylglutathione hydrolase 373 53.78 0 402177..403286 - 369 170682377 adhC EcSMS35_0387 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 374 53.26 0 403321..403596 - 91 170680784 - EcSMS35_0388 - hypothetical protein 375 50.13 0 403781..404554 - 257 170681412 - EcSMS35_0389 - hypothetical protein 376 45.80 0 404556..404996 - 146 170679736 - EcSMS35_0390 - putative acyltransferase 377 50.04 0 405115..406311 - 398 170680221 - EcSMS35_0391 - glycosyl transferase, group 2 family protein 378 43.90 -1 406321..406992 - 223 170680287 - EcSMS35_0392 - putative GlcNAc-PI de-N-acetylase 379 32.78 -2 407430..407609 - 59 170680834 - EcSMS35_0393 - hypothetical protein 380 56.28 +1 407608..408570 + 320 170684058 tauA EcSMS35_0394 - taurine ABC transporter, periplasmic taurine-binding protein 381 56.38 +1 408584..409351 + 255 170679852 tauB EcSMS35_0395 - taurine ABC transporter, ATP-binding protein 382 57.97 +1 409348..410175 + 275 170683056 tauC EcSMS35_0396 - taurine uptake ABC transporter, permease protein 383 54.93 0 410172..411023 + 283 170683535 tauD EcSMS35_0397 - taurine dioxygenase 384 53.74 0 411063..412037 - 324 170680798 hemB EcSMS35_0398 - delta-aminolevulinic acid dehydratase 385 42.31 -1 412563..413420 + 285 170682512 - EcSMS35_0400 - hypothetical protein 386 54.97 0 413260..414165 - 301 170682518 - EcSMS35_0399 - IS2 transposase orfB 387 50.61 0 414123..414533 - 136 170682327 - EcSMS35_0401 - IS2 transposase orfA 388 46.90 0 414664..416808 + 714 170683055 - EcSMS35_0402 - outer membrane autotransporter 389 39.42 -2 416894..417517 + 207 170679630 - EcSMS35_0403 - hypothetical protein 390 55.18 0 417518..418675 - 385 170680606 ampH EcSMS35_0404 - penicillin-binding protein AmpH 391 45.13 0 418813..419007 + 64 170681123 - EcSMS35_0405 - hypothetical protein 392 51.27 0 419027..420247 + 406 170681620 smbA EcSMS35_0406 - protein SbmA 393 53.88 0 420260..421354 + 364 170682252 - EcSMS35_0407 - putative lipoprotein 394 51.78 0 421412..421720 - 102 170682962 - EcSMS35_0408 - hypothetical protein 395 48.36 0 421980..422192 + 70 170683615 - EcSMS35_0409 - hypothetical protein 396 51.78 0 422216..423310 - 364 170684315 ddlA EcSMS35_0410 - D-alanine--D-alanine ligase A 397 34.80 -2 423388..423591 + 67 170679659 - EcSMS35_0411 - hypothetical protein 398 45.21 0 423773..424033 + 86 170680271 - EcSMS35_0412 - hypothetical protein 399 53.81 0 424133..425548 + 471 170680523 phoA EcSMS35_0413 - alkaline phosphatase 400 48.29 0 425667..425987 + 106 170680000 psiF EcSMS35_0414 - phosphate starvation-inducible protein PsiF 401 53.85 0 426089..427204 + 371 170683904 - EcSMS35_0415 - MASE2 domain/diguanylate cyclase 402 54.57 0 427221..428030 - 269 170683285 proC EcSMS35_0416 - pyrroline-5-carboxylate reductase 403 56.43 +1 428150..428608 + 152 170682072 - EcSMS35_0417 - hypothetical protein 404 52.76 0 428791..429315 + 174 170683799 aroL EcSMS35_0418 - shikimate kinase 405 48.44 0 429365..429556 + 63 170681907 - EcSMS35_0419 - hypothetical protein 406 46.17 0 429814..430491 + 225 170681240 aroM EcSMS35_0420 - AroM protein 407 51.58 0 430563..430847 + 94 170683956 - EcSMS35_0421 - hypothetical protein 408 49.10 0 431055..431333 + 92 170680752 - EcSMS35_0422 - hypothetical protein 409 51.43 0 431491..432402 - 303 170681396 rdgC EcSMS35_0423 - recombination-associated exonuclease RdgC 410 55.89 0 432527..433435 + 302 170682440 mak EcSMS35_0424 - manno(fructo)kinase 411 50.83 0 433575..434843 - 422 170683106 araJ EcSMS35_0425 - protein araJ 412 54.36 0 434885..438028 - 1047 170682477 sbcC EcSMS35_0426 - nuclease SbcCD, C subunit 413 52.78 0 438025..439227 - 400 170683006 sbcD EcSMS35_0427 - nuclease SbcCD, D subunit 414 46.21 0 439213..439344 + 43 170683648 - EcSMS35_0428 - hypothetical protein 415 54.49 0 439417..440106 + 229 170684203 phoB EcSMS35_0429 - phosphate regulon transcriptional regulatory protein PhoB 416 52.55 0 440164..441459 + 431 170681341 phoR EcSMS35_0430 - phosphate regulon sensor protein PhoR 417 44.00 -1 441672..441821 - 49 170680082 - EcSMS35_0431 - hypothetical protein 418 55.76 0 441866..443185 + 439 170680091 brnQ EcSMS35_0432 - branched-chain amino acid transport system II carrier protein 419 52.51 0 443258..444634 + 458 170680647 proY EcSMS35_0433 - proline-specific permease ProY 420 55.12 0 444790..446607 + 605 170681194 malZ EcSMS35_0434 - maltodextrin glucosidase 421 36.45 -2 446794..448239 + 481 170681654 - EcSMS35_0435 - hypothetical protein 422 53.61 0 448260..448841 - 193 170684080 acpH EcSMS35_0436 - [acyl-carrier-protein] phosphodiesterase 423 54.06 0 448934..450004 + 356 170682221 queA EcSMS35_0437 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 424 51.15 0 450059..451186 + 375 170680278 tgt EcSMS35_0438 - queuine tRNA-ribosyltransferase 425 49.55 0 451209..451541 + 110 170683289 yajC EcSMS35_0439 - preprotein translocase, YajC subunit 426 53.84 0 451569..453416 + 615 170680742 secD EcSMS35_0440 - protein-export membrane protein SecD 427 52.26 0 453427..454398 + 323 170684249 secF EcSMS35_0441 - protein-export membrane protein SecF 428 44.44 -1 454549..454791 + 80 170679872 - EcSMS35_0442 - CC2985 family addiction module antidote protein 429 45.74 0 454784..455065 + 93 170682953 - EcSMS35_0443 - RelE/ParE family plasmid stabilization system protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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