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Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3550 59.98 +1 3763365..3764381 - 338 170680706 rtcA EcSMS35_3700 - RNA 3'-terminal phosphate cyclase 3551 50.20 0 3764385..3765611 - 408 170679877 rtcB EcSMS35_3701 - RtcB protein 3552 55.28 0 3765799..3767397 + 532 170680280 rtcR EcSMS35_3703 - sigma-54 dependent transcriptional regulator RtcR 3553 54.41 0 3767379..3768137 - 252 170683823 glpR EcSMS35_3702 - glycerol-3-phosphate regulon repressor 3554 53.91 0 3768154..3768984 - 276 170683698 - EcSMS35_3704 - S54 family peptidase 3555 54.43 0 3769029..3769355 - 108 170684232 glpE EcSMS35_3705 - thiosulfate sulfurtransferase glpE 3556 54.98 0 3769545..3771050 + 501 170682330 glpD EcSMS35_3706 - glycerol-3-phosphate dehydrogenase 3557 46.83 0 3771868..3772860 - 330 170683549 - EcSMS35_3708 - hypothetical protein 3558 46.88 0 3772886..3774391 - 501 170681684 - EcSMS35_3709 - hypothetical protein 3559 51.55 0 3774520..3776967 - 815 170682143 glgP EcSMS35_3710 - glycogen phosphorylase 3560 54.74 0 3776986..3778419 - 477 170680998 glgA EcSMS35_3711 - starch synthase 3561 52.62 0 3778419..3779714 - 431 170682122 glgC EcSMS35_3712 - glucose-1-phosphate adenylyltransferase 3562 54.00 0 3779732..3781705 - 657 170679803 glgX EcSMS35_3713 - glycogen debranching enzyme GlgX 3563 53.27 0 3781702..3783888 - 728 170680453 glgB EcSMS35_3714 - 1,4-alpha-glucan branching enzyme 3564 53.53 0 3784161..3785264 - 367 170680367 asd EcSMS35_3715 - aspartate-semialdehyde dehydrogenase 3565 49.83 0 3785456..3786049 + 197 170679768 - EcSMS35_3716 - MarC family integral membrane protein 3566 50.21 0 3786095..3787297 - 400 170683496 - EcSMS35_3717 - putative DNA protecting protein DprA 3567 49.12 0 3787297..3789393 - 698 170684175 - EcSMS35_3718 - ATP-dependent DNA helicase RecQ 3568 55.11 0 3789533..3790873 - 446 170680129 gntU EcSMS35_3719 - gluconate transporter GntU 3569 50.46 0 3790877..3791425 - 182 170680239 gntK EcSMS35_3720 - thermoresistant gluconokinase 3570 54.12 0 3791543..3792538 - 331 170681394 gntR EcSMS35_3721 - transcriptional regulator GntR 3571 47.33 0 3792616..3792765 + 49 170681325 - EcSMS35_3723 - hypothetical protein 3572 52.30 0 3792762..3793457 - 231 170680488 - EcSMS35_3722 - pirin family protein 3573 51.16 0 3793580..3794617 - 345 170681404 - EcSMS35_3724 - oxidoreductase, NAD-binding 3574 51.74 0 3794951..3795439 + 162 170679976 - EcSMS35_3725 - acetyltransferase 3575 53.78 0 3795500..3797245 - 581 170680502 ggt EcSMS35_3726 - gamma-glutamyltransferase 3576 50.34 0 3797365..3797805 + 146 170683830 - EcSMS35_3728 - hypothetical protein 3577 55.65 0 3797792..3798535 - 247 170683164 - EcSMS35_3727 - glycerophosphoryl diester phosphodiesterase 3578 57.42 +1 3798532..3799602 - 356 170682930 ugpC EcSMS35_3729 - sn-glycerol-3-phosphate transport ATP-binding protein 3579 53.19 0 3799604..3800449 - 281 170682666 - EcSMS35_3730 - sn-glycerol 3-phosphate transport protein 3580 55.74 0 3800446..3801333 - 295 170681862 ugpA EcSMS35_3731 - sn-glycerol-3-phosphate transport system permease protein UgpA 3581 53.30 0 3801431..3802747 - 438 170680964 ugpB EcSMS35_3732 - glycerol-3-phosphate-binding periplasmic protein precursor 3582 43.14 -1 3802958..3803110 - 50 170682293 - EcSMS35_3733 - hypothetical protein 3583 49.80 0 3803107..3803853 - 248 170684156 - EcSMS35_3734 - hypothetical protein 3584 46.21 0 3803852..3803983 + 43 170680178 - EcSMS35_3736 - hypothetical protein 3585 56.58 +1 3803972..3804685 - 237 170683525 livF EcSMS35_3735 - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF 3586 54.69 0 3804687..3805454 - 255 170679813 livG EcSMS35_3737 - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivG 3587 56.57 +1 3805451..3806728 - 425 170681266 livM EcSMS35_3738 - high-affinity branched-chain amino acid ABC transporter, permease protein LivM 3588 55.77 0 3806725..3807651 - 308 170680877 livH EcSMS35_3739 - high-affinity branched-chain amino acid transport system permease protein livH 3589 53.24 0 3807699..3808808 - 369 170683091 livK EcSMS35_3740 - high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK 3590 33.33 -2 3808960..3809097 - 45 170682480 - EcSMS35_3741 - hypothetical protein 3591 56.77 +1 3809232..3809615 + 127 170681379 - EcSMS35_3742 - acetyltransferase 3592 53.71 0 3809803..3810906 - 367 170679864 livJ EcSMS35_3743 - high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein LivJ 3593 53.92 0 3811178..3812032 - 284 170683649 rpoH EcSMS35_3744 - alternative sigma factor RpoH 3594 53.45 0 3812277..3813335 - 352 170684192 ftsX EcSMS35_3745 - cell division protein FtsX 3595 55.46 0 3813328..3813996 - 222 170684146 ftsE EcSMS35_3746 - cell division ATP-binding protein FtsE 3596 52.76 0 3813999..3815537 - 512 170682136 ftsY EcSMS35_3747 - cell division protein FtsY 3597 53.94 0 3815687..3816283 + 198 170683100 rsmD EcSMS35_3748 - 16S rRNA methyltransferase RsmD 3598 45.19 0 3816273..3816542 + 89 170681085 - EcSMS35_3749 - hypothetical protein 3599 50.00 0 3816545..3816904 - 119 170680688 - EcSMS35_3750 - hypothetical protein 3600 56.46 +1 3817045..3817671 + 208 170683538 - EcSMS35_3751 - hypothetical protein 3601 57.89 +1 3817745..3819943 + 732 170683459 zntA EcSMS35_3752 - heavy-metal transporting ATPase ZntA 3602 49.51 0 3819976..3820284 - 102 170684194 - EcSMS35_3753 - hypothetical protein 3603 51.22 0 3820499..3820744 - 81 170682812 tusA EcSMS35_3754 - sulfurtransferase TusA 3604 51.05 0 3820965..3821630 + 221 170682902 - EcSMS35_3755 - hypothetical protein 3605 51.61 0 3821703..3822260 + 185 170680804 - EcSMS35_3756 - putative lipoprotein 3606 55.56 0 3822264..3823514 - 416 170681523 - EcSMS35_3757 - major facilitator transporter 3607 51.14 0 3823613..3824662 + 349 170679689 - EcSMS35_3758 - hypothetical protein 3608 56.97 +1 3824717..3825304 + 195 170680191 acpT EcSMS35_3759 - 4'-phosphopantetheinyl transferase acpT 3609 53.65 0 3825415..3826989 + 524 170684038 nikA EcSMS35_3760 - nickel ABC transporter, periplasmic nickel-binding protein NikA 3610 58.84 +1 3826989..3827933 + 314 170682486 nikB EcSMS35_3761 - nickel ABC transporter, permease protein NikB 3611 60.79 +1 3827930..3828763 + 277 170683465 nikC EcSMS35_3762 - nickel ABC transporter, permease protein NikC 3612 58.95 +1 3828763..3829527 + 254 170683361 nikD EcSMS35_3763 - nickel ABC transporter, ATP-binding protein NikD 3613 56.01 +1 3829524..3830330 + 268 170680252 nikE EcSMS35_3764 - nickel ABC transporter, ATP-binding protein NikE 3614 55.97 0 3830336..3830737 + 133 170679661 nikR EcSMS35_3765 - nickel-responsive transcriptional regulator NikR 3615 42.70 -1 3830936..3831682 + 248 170681848 - EcSMS35_3766 - GntR family transcriptional regulator 3616 48.52 0 3831707..3832180 + 157 170681208 - EcSMS35_3767 - PEP-dependent sugar transporting PTS family, IIA component 3617 45.74 0 3832177..3832458 + 93 170682948 - EcSMS35_3768 - PEP-dependent sugar transporting PTS family, IIB component 3618 51.14 0 3832532..3833890 + 452 170682820 - EcSMS35_3769 - PEP-dependent sugar transporting PTS family, IIC component 3619 54.61 0 3833883..3835391 + 502 170682100 - EcSMS35_3770 - carbohydrate kinase 3620 46.67 0 3835381..3835650 + 89 170683793 - EcSMS35_3771 - HPr family phosphocarrier protein 3621 49.25 0 3835682..3836542 + 286 170682827 - EcSMS35_3772 - fructose-bisphosphate aldolase, class II 3622 43.84 -1 3836592..3836924 - 110 170682114 - EcSMS35_3773 - HicB family protein 3623 54.67 0 3837295..3838419 - 374 170683726 - EcSMS35_3774 - ABC transporter, ATP-binding protein 3624 56.62 +1 3838419..3841154 - 911 170680682 - EcSMS35_3775 - ABC transporter, ATP binding protein 3625 58.80 +1 3841151..3842218 - 355 170680028 - EcSMS35_3776 - MFP family transporter 3626 50.00 0 3842281..3842394 - 37 170681743 - EcSMS35_3777 - hypothetical protein 3627 37.15 -2 3842584..3844206 - 540 170681068 - EcSMS35_3778 - hypothetical protein 3628 33.70 -2 3844468..3846120 - 550 170682687 - EcSMS35_3779 - hypothetical protein 3629 47.20 0 3846440..3847492 + 350 170682012 - EcSMS35_3780 - hypothetical protein 3630 54.70 0 3847807..3849009 - 400 170683730 - EcSMS35_3781 - pyridine nucleotide-disulfide oxidoreductase family protein 3631 53.67 0 3849241..3850740 + 499 170681103 pitA EcSMS35_3782 - low-affinity inorganic phosphate transporter 1 3632 48.94 0 3850811..3851092 - 93 170682188 uspB EcSMS35_3783 - universal stress protein B 3633 49.20 0 3851537..3851971 + 144 170682727 uspA EcSMS35_3784 - universal stress protein A 3634 51.97 0 3852287..3853756 + 489 170682598 - EcSMS35_3785 - amino acid/peptide transporter 3635 58.30 +1 3853805..3854557 - 250 170683366 - EcSMS35_3786 - hypothetical protein 3636 55.41 0 3854565..3856607 - 680 170684269 prlC EcSMS35_3787 - oligopeptidase A 3637 55.28 0 3856810..3857652 + 280 170679705 yhiR EcSMS35_3788 - DNA utilization protein YhiR 3638 53.73 0 3857724..3859076 + 450 170679895 gor EcSMS35_3789 - glutathione-disulfide reductase 3639 47.50 0 3859127..3859246 - 39 170680664 - EcSMS35_3790 - hypothetical protein 3640 49.43 0 3859241..3859414 + 57 170681487 - EcSMS35_3791 - hypothetical protein 3641 43.86 -1 3859738..3859851 - 37 170682355 - EcSMS35_3792 - hypothetical protein 3642 49.44 0 3859954..3860307 + 117 170681943 arsR EcSMS35_3793 - arsenical resistance operon repressor 3643 54.26 0 3860362..3861651 + 429 170683643 arsB EcSMS35_3794 - arsenical pump membrane protein 3644 50.47 0 3861664..3862089 + 141 170683373 arsC EcSMS35_3795 - arsenate reductase (glutaredoxin) 3645 47.98 0 3862110..3862430 - 106 170683896 - EcSMS35_3796 - ArsR family transcriptional regulator 3646 45.91 0 3862537..3863538 + 333 170679968 - EcSMS35_3797 - putative permease 3647 33.01 -2 3864118..3865341 + 407 170680481 - EcSMS35_3798 - hypothetical protein 3648 42.60 -1 3865431..3866153 + 240 170680229 - EcSMS35_3799 - Slp family outer membrane lipoprotein 3649 40.11 -1 3866306..3866836 + 176 170681778 dctR EcSMS35_3800 - transcriptional regulator DctR 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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