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Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3433 52.74 0 3661449..3662396 + 315 170682749 fmt EcSMS35_3583 - methionyl-tRNA formyltransferase 3434 49.69 0 3662442..3663731 + 429 170684100 rsmB EcSMS35_3584 - ribosomal RNA small subunit methyltransferase B 3435 50.11 0 3663753..3665129 + 458 170680013 trkA EcSMS35_3585 - Trk system potassium uptake protein TrkA 3436 44.77 -1 3665259..3665669 + 136 170680177 mscL EcSMS35_3586 - large conductance mechanosensitive channel protein 3437 50.00 0 3665940..3666365 - 141 170680832 zntR EcSMS35_3587 - Zn(II)-responsive transcriptional regulator 3438 46.61 0 3666376..3666744 - 122 170682418 - EcSMS35_3588 - hypothetical protein 3439 53.65 0 3666851..3667234 - 127 170682965 rplQ EcSMS35_3589 - ribosomal protein L17 3440 52.22 0 3667275..3668264 - 329 170683426 rpoA EcSMS35_3590 - DNA-directed RNA polymerase, alpha subunit 3441 50.72 0 3668290..3668910 - 206 170683332 rpsD EcSMS35_3591 - ribosomal protein S4 3442 51.54 0 3668944..3669333 - 129 170679818 rpsK EcSMS35_3592 - ribosomal protein S11 3443 51.82 0 3669350..3669706 - 118 170683249 rpsM EcSMS35_3593 - ribosomal protein S13p 3444 47.86 0 3669853..3669969 - 38 170682559 rpmJ1 EcSMS35_3594 - ribosomal protein L36 3445 49.62 0 3670001..3671332 - 443 170681949 secY EcSMS35_3595 - preprotein translocase, SecY subunit 3446 53.79 0 3671340..3671774 - 144 170683231 rplO EcSMS35_3596 - ribosomal protein L15 3447 50.00 0 3671778..3671957 - 59 170683915 rpmD EcSMS35_3597 - ribosomal protein L30 3448 50.00 0 3671961..3672464 - 167 170679847 rpsE EcSMS35_3598 - ribosomal protein S5 3449 53.67 0 3672479..3672832 - 117 170680518 rplR EcSMS35_3599 - ribosomal protein L18 3450 51.87 0 3672842..3673375 - 177 170680532 rplF EcSMS35_3600 - ribosomal protein L6 3451 50.13 0 3673388..3673780 - 130 170681247 rpsH EcSMS35_3601 - ribosomal protein S8 3452 52.61 0 3673814..3674119 - 101 170681893 rpsN EcSMS35_3602 - ribosomal protein S14p 3453 49.63 0 3674134..3674673 - 179 170683635 rplE EcSMS35_3603 - ribosomal protein L5 3454 46.03 0 3674688..3675002 - 104 170682364 rplX EcSMS35_3604 - ribosomal protein L24 3455 51.08 0 3675013..3675384 - 123 170682900 rplN EcSMS35_3605 - ribosomal protein L14 3456 47.45 0 3675549..3675803 - 84 170681006 rpsQ EcSMS35_3606 - ribosomal protein S17 3457 54.17 0 3675803..3675994 - 63 170681520 rpmC EcSMS35_3607 - ribosomal protein L29 3458 51.58 0 3675994..3676404 - 136 170680184 rplP EcSMS35_3608 - ribosomal protein L16 3459 51.00 0 3676417..3677118 - 233 170683377 rpsC EcSMS35_3609 - ribosomal protein S3 3460 49.85 0 3677136..3677468 - 110 170683646 rplV EcSMS35_3610 - ribosomal protein L22 3461 49.10 0 3677483..3677761 - 92 170682027 rpsS EcSMS35_3611 - ribosomal protein S19 3462 52.68 0 3677778..3678599 - 273 170683086 rplB EcSMS35_3612 - ribosomal protein L2 3463 47.85 0 3678617..3678919 - 100 170681042 rplW EcSMS35_3613 - ribosomal protein L23 3464 52.97 0 3678916..3679521 - 201 170679638 rplD EcSMS35_3614 - ribosomal protein L4 3465 51.27 0 3679532..3680161 - 209 170680319 rplC EcSMS35_3615 - ribosomal protein L3 3466 55.45 0 3680194..3680505 - 103 170683626 rpsJ EcSMS35_3616 - ribosomal protein S10 3467 49.36 0 3680884..3681351 + 155 170682251 - EcSMS35_3618 - A24 family peptidase 3468 41.09 -1 3681348..3681824 - 158 170684300 bfr EcSMS35_3617 - bacterioferritin 3469 45.13 0 3681897..3682091 - 64 170682920 bfd EcSMS35_3619 - bacterioferritin-associated ferredoxin 3470 53.16 0 3682274..3683458 - 394 170681311 tuf2 EcSMS35_3620 - translation elongation factor Tu 3471 50.73 0 3683529..3685643 - 704 170681744 fusA EcSMS35_3621 - translation elongation factor G 3472 49.68 0 3685740..3686210 - 156 170680064 rpsG EcSMS35_3622 - ribosomal protein S7 3473 53.07 0 3686307..3686681 - 124 170683246 rpsL EcSMS35_3623 - ribosomal protein S12 3474 50.00 0 3686807..3687094 - 95 170682708 dsrH EcSMS35_3624 - sulfur relay protein TusD/DsrH 3475 50.00 0 3687102..3687461 - 119 170682208 tusC EcSMS35_3625 - sulfur relay protein TusC/DsrF 3476 55.30 0 3687461..3687847 - 128 170681621 tusD EcSMS35_3626 - sulfurtransferase TusD 3477 47.30 0 3687847..3688569 - 240 170681109 - EcSMS35_3627 - hypothetical protein 3478 48.34 0 3688736..3689548 - 270 170680696 fkpA EcSMS35_3628 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA 3479 53.42 0 3689769..3689987 + 72 170683809 - EcSMS35_3629 - slyX protein 3480 55.33 0 3690037..3690627 - 196 170683250 slyD EcSMS35_3630 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 3481 48.26 0 3690722..3690922 - 66 170682580 - EcSMS35_3631 - hypothetical protein 3482 54.10 0 3690932..3692737 - 601 170682213 kefB EcSMS35_3632 - glutathione-regulated potassium-efflux system protein KefB 3483 56.70 +1 3692737..3693288 - 183 170684014 kefG EcSMS35_3633 - glutathione-regulated potassium-efflux system ancillary protein kefG 3484 55.69 0 3693419..3695332 + 637 170679823 - EcSMS35_3634 - ABC transporter, ATP-binding protein 3485 53.57 0 3695332..3696354 + 340 170683037 - EcSMS35_3635 - alpha/beta fold family hydrolase 3486 50.23 0 3696348..3696566 + 72 170683432 - EcSMS35_3636 - hypothetical protein 3487 53.45 0 3696620..3697489 + 289 170683032 - EcSMS35_3637 - phosphoribulokinase/uridine kinase family protein 3488 51.60 0 3697544..3697948 - 134 170682548 - EcSMS35_3638 - OsmC family protein 3489 49.76 0 3698250..3698882 + 210 170681629 crp EcSMS35_3639 - catabolite gene activator 3490 53.28 0 3698933..3701023 + 696 170682476 - EcSMS35_3640 - YccS/YhfK family integral membrane protein 3491 54.00 0 3701086..3702309 - 407 170679794 argD EcSMS35_3641 - acetylornithine/succinyldiaminopimelate aminotransferase 3492 53.55 0 3702395..3702958 - 187 170680557 pabA EcSMS35_3642 - aminodeoxychorismate synthase, component II 3493 53.73 0 3702990..3703592 - 200 170681998 fic EcSMS35_3643 - cell filamentation protein Fic 3494 51.31 0 3703854..3704426 - 190 170681864 ppiA EcSMS35_3644 - peptidyl-prolyl cis-trans isomerase A 3495 40.14 -1 3704570..3704716 - 48 170682492 - EcSMS35_3645 - hypothetical protein 3496 52.37 0 3704697..3705878 + 393 170682755 tsgA EcSMS35_3646 - major facilitator family transporter TsgA 3497 54.21 0 3706140..3708683 + 847 170683252 nirB EcSMS35_3647 - nitrite reductase [NAD(P)H], large subunit 3498 56.27 +1 3708680..3709006 + 108 170684098 nirD EcSMS35_3648 - nitrite reductase [NAD(P)H], small subunit 3499 54.52 0 3709131..3709937 + 268 170683994 nirC EcSMS35_3649 - nitrite transporter NirC 3500 54.00 0 3709956..3711329 + 457 170680692 cysG EcSMS35_3650 - siroheme synthase 3501 42.26 -1 3711580..3711747 + 55 170681033 - EcSMS35_3651 - putative lipoprotein 3502 57.27 +1 3711854..3712939 - 361 170682063 - EcSMS35_3652 - hypothetical protein 3503 53.56 0 3712951..3714255 - 434 170680136 - EcSMS35_3653 - hypothetical protein 3504 47.46 0 3714267..3714620 - 117 170681101 - EcSMS35_3654 - hypothetical protein 3505 52.56 0 3714631..3715509 - 292 170680454 - EcSMS35_3655 - phosphotriesterase family protein 3506 54.44 0 3715506..3716732 - 408 170680107 - EcSMS35_3656 - metalloenzyme domain-containing protein 3507 53.95 0 3716732..3717895 - 387 170684172 - EcSMS35_3657 - alanine racemase 3508 50.41 0 3717979..3718341 - 120 170680031 - EcSMS35_3658 - hypothetical protein 3509 51.66 0 3718358..3719263 - 301 170680763 - EcSMS35_3659 - hypothetical protein 3510 52.24 0 3719423..3720427 - 334 170681086 trpS EcSMS35_3660 - tryptophanyl-tRNA synthetase 3511 52.31 0 3720420..3721178 - 252 170681789 gph EcSMS35_3661 - phosphoglycolate phosphatase 3512 50.44 0 3721171..3721848 - 225 170680384 rpe EcSMS35_3662 - ribulose-phosphate 3-epimerase 3513 49.10 0 3721866..3722702 - 278 170683954 dam EcSMS35_3663 - DNA adenine methylase 3514 54.62 0 3722809..3724095 - 428 170683150 damX EcSMS35_3664 - DamX protein 3515 54.09 0 3724187..3725275 - 362 170680643 aroB EcSMS35_3665 - 3-dehydroquinate synthase 3516 47.94 0 3725332..3726009 - 225 170680023 aroK EcSMS35_3666 - shikimate kinase 3517 54.00 0 3726254..3727492 - 412 170681657 - EcSMS35_3667 - protein transporter HofQ 3518 52.10 0 3727404..3727808 - 134 170681152 - EcSMS35_3668 - hypothetical protein 3519 57.58 +1 3727798..3727995 - 65 170682127 - EcSMS35_3669 - hypothetical protein 3520 57.50 +1 3727981..3728100 + 39 170683769 - EcSMS35_3670 - hypothetical protein 3521 54.63 0 3728222..3728761 - 179 170683225 - EcSMS35_3671 - PilN family protein 3522 57.95 +1 3728761..3729540 - 259 170680610 hofM EcSMS35_3672 - HofM protein 3523 54.79 0 3729636..3732212 + 858 170683444 mrcA EcSMS35_3673 - penicillin-binding protein 1A 3524 50.98 0 3732380..3732940 - 186 170680526 nudE EcSMS35_3674 - ADP compounds hydrolase NudE 3525 48.33 0 3733144..3733263 + 39 170680061 - EcSMS35_3675 - hypothetical protein 3526 52.76 0 3733260..3735395 + 711 170681885 - EcSMS35_3676 - hypothetical protein 3527 51.57 0 3735460..3736128 + 222 170681347 - EcSMS35_3677 - HAD family hydrolase 3528 52.74 0 3736139..3736540 + 133 170680851 hslR EcSMS35_3678 - heat shock protein 15 3529 52.79 0 3736565..3737443 + 292 170682746 hslO EcSMS35_3679 - chaperonin HslO 3530 50.03 0 3737577..3739301 - 574 170682230 - EcSMS35_3680 - hypothetical protein 3531 32.56 -2 3739307..3739435 - 42 170684065 - EcSMS35_3681 - hypothetical protein 3532 53.54 0 3739680..3741302 + 540 170683548 pckA EcSMS35_3682 - phosphoenolpyruvate carboxykinase (ATP) 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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