version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 275 53.12 0 294541..295596 + 351 170679693 dinB EcSMS35_0285 - DNA polymerase IV 276 42.18 -1 295648..295941 + 97 170683148 - EcSMS35_0286 - addiction module antitoxin 277 43.93 -1 296353..296805 + 150 170682780 - EcSMS35_0288 - acetyltransferase 278 52.37 0 296996..298135 + 379 170682374 - EcSMS35_0289 - hypothetical protein 279 54.47 0 298132..298746 + 204 170684096 - EcSMS35_0290 - peptidyl-tRNA hydrolase domain-containing protein 280 51.71 0 298803..300260 - 485 170683224 pepD EcSMS35_0291 - aminoacyl-histidine dipeptidase 281 51.85 0 300521..300979 + 152 170680344 gpt EcSMS35_0292 - xanthine phosphoribosyltransferase 282 53.57 0 301071..302315 + 414 170681335 frsA EcSMS35_0293 - fermentation-respiration switch protein 283 50.00 0 302373..302774 + 133 170680819 crl EcSMS35_0294 - sigma factor-binding protein Crl 284 44.79 -1 302813..303868 - 351 170681243 phoE EcSMS35_0295 - outer membrane pore protein E 285 55.71 0 304156..305259 + 367 170681970 proB EcSMS35_0296 - glutamate 5-kinase 286 54.23 0 305271..306524 + 417 170682591 proA EcSMS35_0297 - gamma-glutamyl phosphate reductase 287 48.95 0 306879..308063 + 394 170681995 - EcSMS35_0299 - phage integrase family site specific recombinase 288 32.61 -2 308165..309130 + 321 170683965 - EcSMS35_0300 - hypothetical protein 289 28.78 -2 309610..310773 - 387 170681416 - EcSMS35_0301 - hypothetical protein 290 34.89 -2 310770..311219 - 149 170680899 - EcSMS35_0302 - response regulator 291 30.46 -2 311216..314491 - 1091 170682597 - EcSMS35_0303 - hypothetical protein 292 50.32 0 314956..315267 + 103 170681984 - EcSMS35_0304 - IS911 transposase orfA 293 53.01 0 315387..316133 + 248 170683982 - EcSMS35_0305 - IS911 transposase orfB 294 52.51 0 316666..317124 + 152 170680057 - EcSMS35_0307 - antirestriction protein 295 55.83 0 317136..317615 + 159 170684134 - EcSMS35_0308 - RadC family DNA repair protein 296 55.86 0 317624..317845 + 73 170680749 - EcSMS35_0309 - hypothetical protein 297 54.40 0 317865..318182 + 105 170680734 - EcSMS35_0310 - putative antitoxin module of toxin-antitoxin system 298 36.23 -2 318634..318771 + 45 170681027 - EcSMS35_0311 - hypothetical protein 299 52.87 0 318976..319149 + 57 170681475 - EcSMS35_0312 - hypothetical protein 300 44.88 -1 319364..319978 + 204 170679639 - EcSMS35_0313 - hypothetical protein 301 50.35 0 320437..320577 + 46 170683678 - EcSMS35_0314 - hypothetical protein 302 53.16 0 320869..321579 - 236 170684180 - EcSMS35_0315 - hypothetical protein 303 52.01 0 321548..323191 - 547 170682359 - EcSMS35_0316 - hypothetical protein 304 54.87 0 323181..325706 - 841 170682860 - EcSMS35_0317 - hypothetical protein 305 54.86 0 325732..326400 - 222 170680987 - EcSMS35_0318 - hypothetical protein 306 52.72 0 326458..327045 - 195 170680204 matB EcSMS35_0319 - fimbrillin MatB 307 39.41 -2 327120..327662 - 180 170683376 matA EcSMS35_0320 - fimbrillin MatA 308 41.33 -1 328115..328339 - 74 170684094 - EcSMS35_0321 - hypothetical protein 309 43.33 -1 328398..328517 + 39 170683468 - EcSMS35_0322 - hypothetical protein 310 43.26 -1 328746..328886 - 46 170681769 rpmJ2 EcSMS35_0323 - ribosomal protein L36 311 45.83 0 328886..329149 - 87 170681094 rpmE2 EcSMS35_0324 - 50S ribosomal protein L31 type B 312 44.01 -1 330089..331231 - 380 170680739 - EcSMS35_0325 - oxidoreductase, FAD/FMN-binding 313 45.60 0 331476..332396 - 306 170680060 - EcSMS35_0326 - hypothetical protein 314 43.58 -1 332553..333479 + 308 170683778 - EcSMS35_0327 - LysR family transcriptional regulator 315 50.45 0 333679..334572 + 297 170683135 - EcSMS35_0328 - LysR family transcriptional regulator 316 51.11 0 334603..335592 - 329 170682774 - EcSMS35_0329 - aldo/keto reductase family oxidoreductase 317 50.35 0 335619..336470 - 283 170682093 - EcSMS35_0330 - organophosphate reductase 318 52.09 0 337036..341289 + 1417 170680117 - EcSMS35_0331 - putative invasin 319 42.77 -1 341410..342267 - 285 170680656 - EcSMS35_0332 - AraC family transcriptional regulator 320 43.10 -1 342515..343384 + 289 170683890 - EcSMS35_0333 - aldo/keto reductase family oxidoreductase 321 44.28 -1 343546..344139 - 197 170681931 - EcSMS35_0334 - hypothetical protein 322 35.86 -2 344151..344387 - 78 170682857 - EcSMS35_0335 - hypothetical protein 323 45.25 0 344496..345821 - 441 170680932 - EcSMS35_0336 - pyridine nucleotide-disulphide oxidoreductase 324 50.88 0 346048..346902 + 284 170681796 - EcSMS35_0337 - AraC family transcriptional regulator 325 50.56 0 347428..348147 + 239 170679917 - EcSMS35_0338 - hypothetical protein 326 50.56 0 348158..349585 + 475 170681838 - EcSMS35_0339 - iron-sulfur cluster binding protein 327 51.87 0 349578..350273 + 231 170679990 - EcSMS35_0340 - hypothetical protein 328 41.41 -1 350347..350544 - 65 170681827 - EcSMS35_0341 - hypothetical protein 329 58.08 +1 350805..352493 - 562 170681227 betA EcSMS35_0342 - choline dehydrogenase 330 57.84 +1 352507..353979 - 490 170681572 betB EcSMS35_0343 - betaine aldehyde dehydrogenase 331 56.46 +1 353993..354580 - 195 170680533 betI EcSMS35_0344 - transcriptional repressor BetI 332 55.26 0 354709..356742 + 677 170680230 betT EcSMS35_0345 - BCCT family transporter 333 45.55 0 357618..358706 + 362 170679658 - EcSMS35_0346 - LuxR-family transcriptional regulator 334 49.30 0 358748..359680 - 310 170683566 - EcSMS35_0347 - LysR family transcriptional regulator 335 53.01 0 359772..360269 - 165 170682594 - EcSMS35_0348 - hypothetical protein 336 46.86 0 360527..361132 + 201 170682347 - EcSMS35_0349 - ankyrin repeat-containing protein 337 46.99 0 361172..362035 + 287 170681656 - EcSMS35_0350 - hypothetical protein 338 55.17 0 362025..363572 + 515 170683991 - EcSMS35_0351 - acyl-CoA synthetase 339 58.00 +1 363572..364990 + 472 170682165 - EcSMS35_0352 - hypothetical protein 340 56.47 +1 365085..366035 + 316 170682847 - EcSMS35_0353 - carbamate kinase family protein 341 56.47 +1 366045..367427 + 460 170681260 - EcSMS35_0354 - amidohydrolase family protein 342 48.55 0 367651..367788 + 45 170680074 - EcSMS35_0355 - hypothetical protein 343 53.62 0 367804..368853 + 349 170680738 - EcSMS35_0356 - zinc-binding dehydrogenase family oxidoreductase 344 39.58 -1 369096..369911 + 271 170680386 - EcSMS35_0357 - hypothetical protein 345 50.71 0 370587..371219 - 210 170683132 - EcSMS35_0359 - putative homoserine/threonine efflux protein 346 39.13 -2 371405..371680 + 91 170683473 - EcSMS35_0360 - hypothetical protein 347 47.15 0 371707..371829 + 40 170679785 - EcSMS35_0362 - hypothetical protein 348 55.45 0 371781..373367 - 528 170684111 prpR EcSMS35_0361 - propionate catabolism operon regulatory protein PrpR 349 56.68 +1 373606..374496 + 296 170679897 prpB EcSMS35_0363 - methylisocitrate lyase 350 55.56 0 374541..375710 + 389 170680874 prpC EcSMS35_0364 - 2-methylcitrate synthase 351 56.89 +1 375744..377195 + 483 170681387 prpD EcSMS35_0365 - 2-methylcitrate dehydratase 352 57.82 +1 377235..379121 + 628 170679862 prpE EcSMS35_0366 - propionate--CoA ligase 353 53.81 0 379358..380617 + 419 170680347 codB EcSMS35_0367 - cytosine permease 354 53.58 0 380607..381890 + 427 170683266 codA EcSMS35_0368 - cytosine deaminase 355 55.11 0 382023..382922 - 299 170683944 cynR EcSMS35_0369 - transcriptional regulator cynR 356 57.88 +1 383032..383691 + 219 170682028 cynT EcSMS35_0370 - carbonic anhydrase 357 52.02 0 383722..384192 + 156 170683024 cynS EcSMS35_0371 - cyanate hydratase 358 58.27 +1 384225..385379 + 384 170684294 cynX EcSMS35_0372 - cyanate transport protein CynX 359 42.35 -1 385467..386087 - 206 170682300 lacA EcSMS35_0373 - galactoside O-acetyltransferase LacA 360 45.77 0 386144..387397 - 417 170680767 lacY EcSMS35_0374 - lactose permease 361 56.26 +1 387449..390523 - 1024 170681400 lacZ EcSMS35_0375 - beta-galactosidase 362 55.96 0 390646..391728 - 360 170679780 lacI EcSMS35_0376 - lactose operon repressor 363 55.44 0 391805..392650 - 281 170680396 mhpR EcSMS35_0377 - mhp operon transcriptional activator 364 56.76 +1 392829..394493 + 554 170683478 mhpA EcSMS35_0378 - 3-(3-hydroxy-phenyl)propionate hydroxylase 365 57.78 +1 394495..395439 + 314 170684010 mhpB EcSMS35_0379 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase 366 54.56 0 395457..396323 + 288 170683466 mhpC EcSMS35_0380 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 367 56.79 +1 396333..397142 + 269 170684013 mhpD EcSMS35_0381 - 2-keto-4-pentenoate hydratase 368 54.89 0 397139..398089 + 316 170682483 mhpF EcSMS35_0382 - acetaldehyde dehydrogenase 369 56.21 +1 398086..399099 + 337 170682868 mhpE EcSMS35_0383 - 4-hydroxy-2-oxovalerate aldolase 370 58.17 +1 399275..400486 + 403 170680668 - EcSMS35_0384 - putative 3-hydroxyphenylpropionic acid transporter 371 47.59 0 400588..401127 + 179 170683415 - EcSMS35_0385 - hypothetical protein 372 48.20 0 401252..402085 - 277 170684242 fghA2 EcSMS35_0386 - S-formylglutathione hydrolase 373 53.78 0 402177..403286 - 369 170682377 adhC EcSMS35_0387 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 374 53.26 0 403321..403596 - 91 170680784 - EcSMS35_0388 - hypothetical protein 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0